Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 0.0e+00 1635.5 852 100.0
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 0.0e+00 1354.0 857 83.9
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 0.0e+00 1298.5 869 80.7
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 0.0e+00 1218.4 905 74.3
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 0.0e+00 1213.0 862 77.3
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 0.0e+00 1198.3 866 74.6
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 0.0e+00 1182.2 863 74.0
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 0.0e+00 1176.0 859 73.9
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 0.0e+00 1157.1 860 74.0
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 0.0e+00 1151.7 879 72.6
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 0.0e+00 1122.5 872 70.8
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 0.0e+00 1119.8 868 70.7
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.9e-281 972.6 899 59.8
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 1.3e-277 959.9 882 61.3
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 4.6e-275 951.4 901 59.7
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 2.5e-273 945.7 899 59.6
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 4.3e-273 944.9 792 65.0
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 7.4e-273 944.1 898 60.1
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 3.4e-270 935.3 908 58.3
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 9.9e-270 933.7 910 58.8
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 1.2e-267 926.8 916 57.6
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 1.3e-264 916.8 888 59.6
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 8.1e-264 914.1 805 61.2
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.5e-262 909.8 919 56.0
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 2.6e-262 909.1 892 57.3
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 4.5e-262 908.3 912 57.0
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.9e-261 905.6 919 56.7
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 3.8e-261 905.2 915 56.7
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 2.5e-260 902.5 873 57.8
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 7.1e-260 901.0 925 54.2
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 1.3e-258 896.7 881 55.6
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.8e-258 896.3 861 57.1
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 5.1e-258 894.8 867 57.9
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 3.3e-257 892.1 892 57.7
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 2.1e-256 889.4 829 58.9
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 4.8e-256 888.3 944 55.0
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 2.4e-255 885.9 881 55.5
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 1.5e-254 883.2 883 57.8
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 1.1e-252 877.1 915 54.3
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 9.3e-252 874.0 867 57.2
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 1.6e-251 873.2 892 54.7
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.3e-250 870.2 961 53.6
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.3e-248 863.6 798 59.4
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 6.9e-247 857.8 860 57.0
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 6.9e-247 857.8 884 54.2
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 5.5e-244 848.2 884 54.2
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 7.9e-243 844.3 887 55.7
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 8.8e-242 840.9 883 56.1
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 1.7e-240 836.6 877 52.8
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 1.1e-239 833.9 919 53.4
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 1.5e-238 830.1 929 52.6
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 5.9e-238 828.2 919 53.2
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 4.7e-235 818.5 889 53.1
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 1.8e-234 816.6 879 54.3
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 1.5e-233 813.5 935 50.9
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 2.8e-232 809.3 819 54.5
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 2.4e-231 806.2 828 54.3
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 2.4e-231 806.2 883 52.7
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 7.7e-230 801.2 887 51.7
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 7.2e-228 794.7 894 52.8
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 1.6e-227 793.5 868 52.8
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 2.1e-227 793.1 827 53.0
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.8e-226 790.0 799 53.8
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 8.8e-226 787.7 889 53.1
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 4.8e-224 781.9 886 52.0
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 2.4e-223 779.6 885 50.3
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 7.7e-222 774.6 830 53.9
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 2.5e-220 769.6 893 50.6
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 5.5e-220 768.5 843 53.5
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 2.1e-219 766.5 896 52.3
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 2.7e-219 766.1 801 54.3
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 6.8e-218 761.5 789 55.0
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 6.8e-218 761.5 778 54.8
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 7.5e-217 758.1 778 54.1
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 9.8e-217 757.7 766 54.6
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 1.3e-216 757.3 889 51.0
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 1.7e-216 756.9 766 54.6
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 4.1e-215 752.3 821 51.8
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 5.4e-215 751.9 816 52.1
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 3.6e-211 739.2 800 52.8
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 1.1e-207 727.6 791 52.0
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 5.9e-206 721.8 893 49.5
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 1.5e-204 717.2 816 50.1
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 1.8e-202 710.3 816 50.7
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 1.2e-201 707.6 855 48.5
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 4.7e-195 685.6 679 58.9
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 1.6e-190 670.6 693 54.1
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 2.8e-187 659.8 642 55.6
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 8.9e-186 654.8 752 49.1
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 2.6e-185 653.3 822 47.3
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 1.1e-175 621.3 788 46.4
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 3.0e-173 613.2 739 47.4
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 1.3e-165 587.8 871 43.9
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 2.8e-163 580.1 477 61.6
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 6.4e-160 568.9 574 54.2
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 2.1e-155 553.9 550 57.1
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 9.9e-153 545.0 481 61.3
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 1.5e-148 531.2 874 43.0
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 3.1e-146 523.5 408 65.0
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 6.7e-141 505.8 578 50.7
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 3.2e-127 460.3 402 59.5
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 1.9e-103 381.3 1078 30.7
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 6.3e-91 339.7 703 33.3
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 5.4e-90 336.7 380 52.9
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 1.9e-87 328.2 567 39.9
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 3.3e-87 327.4 222 72.1
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 1.0e-85 322.4 973 29.1
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 4.6e-81 307.0 839 31.1
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 2.7e-73 281.2 1095 26.8
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 1.9e-63 248.4 224 62.9
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 6.0e-57 226.9 289 46.4
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 7.8e-49 199.9 135 72.6
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 1.1e-45 189.5 248 53.2
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 5.6e-39 167.2 194 50.5
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 1.8e-37 162.2 219 43.8
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 2.4e-21 108.6 63 73.0
Cfa000625 Carpinus fangiana HOM05D001879 ORTHO05D007957 9.4e-18 96.7 133 49.6
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 8.2e-14 83.6 115 47.0
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 3.4e-12 78.2 90 51.1
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 9.4e-10 70.1 54 61.1
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 1.2e-09 69.7 53 64.2
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 1.2e-09 69.7 53 64.2
Cfa010565 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.8e-08 65.9 107 44.9


User provided reference genes

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