Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15588_v3 Cicer arietinum L. HOM05D005944 ORTHO05D007188 6.6e-131 470.7 236 100.0
TPR.G15103 Trifolium pratense HOM05D005944 ORTHO05D007188 1.9e-101 372.9 243 79.0
Psat5g021160 Pisum sativum HOM05D005944 ORTHO05D007188 5.4e-101 371.3 239 79.5
Medtr3g109690 Medicago truncatula HOM05D005944 ORTHO05D007188 2.5e-98 362.5 239 78.2
VMungo1309G1803 Vigna mungo HOM05D005944 ORTHO05D007188 2.5e-93 345.9 243 73.3
Phvul.009G110100 Phaseolus vulgaris HOM05D005944 ORTHO05D007188 5.5e-93 344.7 213 79.3
Lalb_Chr11g0064511 Lupinus albus HOM05D005944 ORTHO05D007188 4.6e-92 341.7 238 73.1
Glyma.06G086100 Glycine max HOM05D005944 ORTHO05D007188 1.8e-91 339.7 234 75.2
TAR626G0255 Trochodendron aralioides HOM05D005944 ORTHO05D007188 2.7e-84 315.8 232 67.7
Potri.006G238000 Populus trichocarpa HOM05D005944 ORTHO05D007188 4.6e-84 315.1 239 63.2
Cfa013369 Carpinus fangiana HOM05D005944 ORTHO05D007188 5.1e-83 311.6 236 65.3
Haze_21893 Corylus avellana HOM05D005944 ORTHO05D007188 5.1e-83 311.6 235 65.1
Manes.16G075200 Manihot esculenta HOM05D005944 ORTHO05D007188 5.7e-82 308.1 234 62.4
QL12p041319 Quercus lobata HOM05D005944 ORTHO05D007188 3.7e-81 305.4 233 63.9
Prupe.1G447700 Prunus persica HOM05D005944 ORTHO05D007188 1.1e-80 303.9 244 64.8
Cc08_g09670 Coffea canephora HOM05D005944 ORTHO05D007188 1.8e-80 303.1 236 61.9
Lj1g0013558 Lotus japonicus HOM05D005944 ORTHO05D007188 1.8e-80 303.1 211 68.7
Sabra06G0186300 Salix brachista HOM05D005944 ORTHO05D007188 3.1e-80 302.4 241 63.1
Hma1.2p1_0049F.1_g028530 Hydrangea macrophylla HOM05D005944 ORTHO05D007188 2.6e-79 299.3 236 61.9
CSS0001771 Camellia sinensis var. sinensis HOM05D005944 ORTHO05D007188 1.0e-78 297.4 235 61.3
MD08G1113400 Malus domestica HOM05D005944 ORTHO05D007188 1.0e-78 297.4 240 61.7
Nn8g39119 Nelumbo nucifera HOM05D005944 ORTHO05D007188 2.2e-78 296.2 228 61.8
Duzib168G0738 Durio zibethinus HOM05D005944 ORTHO05D007188 6.5e-78 294.7 235 65.5
CiPaw.08G026000 Carya illinoinensis HOM05D005944 ORTHO05D007188 8.5e-78 294.3 227 64.3
TWI34G0404 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 3.2e-77 292.4 213 65.3
Rhsim07G0147000 Rhododendron simsii HOM05D005944 ORTHO05D007188 5.5e-77 291.6 234 61.1
PSO173G0044 Papaver somniferum HOM05D005944 ORTHO05D007188 1.6e-76 290.0 229 60.7
MSTRG.11696 Avicennia marina HOM05D005944 ORTHO05D007188 2.1e-76 289.7 239 60.7
COL.COLO4_20974 Corchorus olitorius HOM05D005944 ORTHO05D007188 4.6e-76 288.5 217 65.0
Gohir.A06G092600 Gossypium hirsutum HOM05D005944 ORTHO05D007188 7.9e-76 287.7 219 66.2
Gohir.D06G092200 Gossypium hirsutum HOM05D005944 ORTHO05D007188 7.9e-76 287.7 219 66.2
Ciclev10009275m.g Citrus clementina HOM05D005944 ORTHO05D007188 1.4e-75 287.0 241 60.6
Thecc.09G045700 Theobroma cacao HOM05D005944 ORTHO05D007188 2.3e-75 286.2 237 62.9
Oeu031102.1 Olea europaea HOM05D005944 ORTHO05D007188 3.0e-75 285.8 226 62.4
Cpa.g.sc78.4 Carica papaya HOM05D005944 ORTHO05D007188 3.9e-75 285.4 232 61.2
MBI01_g42891_MAGBIO Magnolia biondii HOM05D005944 ORTHO05D007188 6.7e-75 284.6 207 65.2
CiPaw.07G203800 Carya illinoinensis HOM05D005944 ORTHO05D007188 1.1e-74 283.9 235 60.4
Sc09g0009310 Simmondsia chinensis HOM05D005944 ORTHO05D007188 1.1e-74 283.9 235 59.6
vmacro23277 Vaccinium macrocarpon HOM05D005944 ORTHO05D007188 1.5e-74 283.5 235 59.6
TWI63G0268 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 2.0e-74 283.1 232 60.3
Gorai.010G106200 Gossypium raimondii HOM05D005944 ORTHO05D007188 3.3e-74 282.3 219 65.3
Nitab4.5_0003794g0090 Nicotiana tabacum HOM05D005944 ORTHO05D007188 2.2e-73 279.6 232 61.2
Migut.A00199 Erythranthe guttata HOM05D005944 ORTHO05D007188 6.9e-72 274.6 240 58.8
Aqoxy7G01465 Aquilegia oxysepala HOM05D005944 ORTHO05D007188 9.1e-72 274.2 227 58.1
DCAR_003123 Daucus carota HOM05D005944 ORTHO05D007188 9.1e-72 274.2 238 55.9
Lsat_1_v5_gn_5_33661 Lactuca sativa HOM05D005944 ORTHO05D007188 1.5e-71 273.5 208 62.0
MELO3C011137.2 Cucumis melo HOM05D005944 ORTHO05D007188 2.6e-71 272.7 236 56.4
CANSAT25G1052 Cannabis sativa HOM05D005944 ORTHO05D007188 3.4e-71 272.3 246 60.2
PGSC0003DMG400002225 Solanum tuberosum HOM05D005944 ORTHO05D007188 7.7e-71 271.2 225 62.7
Solyc08g066550.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 1.0e-70 270.8 234 61.1
Eucgr.C00599 Eucalyptus grandis HOM05D005944 ORTHO05D007188 1.3e-70 270.4 236 57.6
MD15G1092800 Malus domestica HOM05D005944 ORTHO05D007188 2.2e-70 269.6 236 58.5
Sopen08g020390 Solanum pennellii HOM05D005944 ORTHO05D007188 2.9e-70 269.2 233 60.9
Peaxi162Scf00227g00915 Petunia axillaris HOM05D005944 ORTHO05D007188 3.8e-70 268.9 229 59.4
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 4.2e-69 265.4 238 56.3
PGR031G3052 Punica granatum HOM05D005944 ORTHO05D007188 9.4e-69 264.2 245 55.9
Atru.chr7.2083 Acer truncatum HOM05D005944 ORTHO05D007188 2.7e-68 262.7 249 55.8
EL10Ac2g04013 Beta vulgaris HOM05D005944 ORTHO05D007188 7.9e-68 261.2 211 60.2
HanXRQChr08g0234421 Helianthus annuus HOM05D005944 ORTHO05D007188 7.9e-68 261.2 204 61.3
Sc09g0009320 Simmondsia chinensis HOM05D005944 ORTHO05D007188 7.9e-68 261.2 239 56.9
SGA_v2.0_scaffold243G44289 Striga asiatica HOM05D005944 ORTHO05D007188 7.9e-68 261.2 207 60.4
Ah.10g034990 Amaranthus hybridus HOM05D005944 ORTHO05D007188 1.1e-66 257.3 211 58.3
ECA246G4186 Erigeron canadensis HOM05D005944 ORTHO05D007188 2.0e-66 256.5 206 59.2
EL10Ac2g04010 Beta vulgaris HOM05D005944 ORTHO05D007188 5.7e-66 255.0 211 59.2
Nitab4.5_0001567g0220 Nicotiana tabacum HOM05D005944 ORTHO05D007188 9.7e-66 254.2 211 60.7
Sed0020456 Sechium edule HOM05D005944 ORTHO05D007188 9.7e-66 254.2 205 61.0
AUR62009271 Chenopodium quinoa HOM05D005944 ORTHO05D007188 1.7e-65 253.4 213 57.7
AUR62039710 Chenopodium quinoa HOM05D005944 ORTHO05D007188 1.7e-65 253.4 214 57.9
Sed0026395 Sechium edule HOM05D005944 ORTHO05D007188 2.8e-65 252.7 239 55.2
SalBow4G1457 Salvia bowleyana HOM05D005944 ORTHO05D007188 2.0e-63 246.5 215 55.8
PGSC0003DMG400018561 Solanum tuberosum HOM05D005944 ORTHO05D007188 2.9e-62 242.7 226 58.8
Nitab4.5_0000664g0190 Nicotiana tabacum HOM05D005944 ORTHO05D007188 1.4e-59 233.8 227 56.4
TWI63G1513 Tripterygium wilfordii HOM05D005944 ORTHO05D007188 1.8e-59 233.4 215 55.8
Os06g0554100 Oryza sativa ssp. japonica HOM05D005944 ORTHO05D007188 3.7e-57 225.7 240 48.8
unitig_32.g11474 Utricularia gibba HOM05D005944 ORTHO05D007188 6.3e-57 224.9 233 51.9
Carub.0006s1010 Capsella rubella HOM05D005944 ORTHO05D007188 8.2e-57 224.6 268 46.6
Zm00001eb384710 Zea mays HOM05D005944 ORTHO05D007188 1.8e-56 223.4 228 46.9
THA.LOC104799702 Tarenaya hassleriana HOM05D005944 ORTHO05D007188 2.4e-56 223.0 236 50.4
Ah.02g111320 Amaranthus hybridus HOM05D005944 ORTHO05D007188 5.3e-56 221.9 204 52.5
Nitab4.5_0001515g0030 Nicotiana tabacum HOM05D005944 ORTHO05D007188 3.5e-55 219.2 231 53.7
RcHm_v2.0_Chr6g0306401 Rosa chinensis HOM05D005944 ORTHO05D007188 4.5e-55 218.8 212 51.4
FAN27G2199 Fragaria x ananassa HOM05D005944 ORTHO05D007188 7.7e-55 218.0 215 50.7
FvH4_2g35480 Fragaria vesca HOM05D005944 ORTHO05D007188 1.7e-54 216.9 215 50.2
CARHR201600 Cardamine hirsuta HOM05D005944 ORTHO05D007188 2.2e-54 216.5 270 44.1
FAN20G0862 Fragaria x ananassa HOM05D005944 ORTHO05D007188 2.2e-54 216.5 221 50.2
Thhalv10014372m.g Eutrema salsugineum HOM05D005944 ORTHO05D007188 2.9e-54 216.1 267 45.3
BcaB08g37038 Brassica carinata HOM05D005944 ORTHO05D007188 3.2e-53 212.6 265 44.2
AUR62011965 Chenopodium quinoa HOM05D005944 ORTHO05D007188 4.2e-53 212.2 228 46.1
Sp6g32000 Schrenkiella parvula HOM05D005944 ORTHO05D007188 5.5e-53 211.8 239 46.0
AL6G22330 Arabidopsis lyrata HOM05D005944 ORTHO05D007188 9.4e-53 211.1 270 45.2
A10p26150 Brassica napus HOM05D005944 ORTHO05D007188 3.6e-52 209.1 267 42.3
BraA10t44674Z Brassica rapa HOM05D005944 ORTHO05D007188 3.6e-52 209.1 267 42.3
BolC9t59349H Brassica oleracea HOM05D005944 ORTHO05D007188 4.7e-52 208.8 267 42.3
Aa31LG3G15570 Aethionema arabicum HOM05D005944 ORTHO05D007188 8.0e-52 208.0 247 44.1
BcaC04g19210 Brassica carinata HOM05D005944 ORTHO05D007188 8.0e-52 208.0 267 42.3
C09p65200 Brassica napus HOM05D005944 ORTHO05D007188 8.0e-52 208.0 267 42.3
FAN15G0753 Fragaria x ananassa HOM05D005944 ORTHO05D007188 8.0e-52 208.0 210 50.0
ECA233G3370 Erigeron canadensis HOM05D005944 ORTHO05D007188 1.0e-51 207.6 193 53.9
HanXRQChr02g0050591 Helianthus annuus HOM05D005944 ORTHO05D007188 5.2e-51 205.3 188 52.1
AT5G11620 Arabidopsis thaliana HOM05D005944 ORTHO05D007188 1.2e-50 204.1 271 43.2
EL10Ac5g10487 Beta vulgaris HOM05D005944 ORTHO05D007188 9.8e-50 201.1 215 46.5
Glyma.04G084500 Glycine max HOM05D005944 ORTHO05D007188 7.7e-47 191.4 126 80.2
HPP92_024066 Vanilla planifolia HOM05D005944 ORTHO05D007188 2.2e-46 189.9 204 48.0
HanXRQChr13g0402041 Helianthus annuus HOM05D005944 ORTHO05D007188 5.5e-45 185.3 198 48.0
ATR0561G048 Amborella trichopoda HOM05D005944 ORTHO05D007188 1.3e-41 174.1 212 45.8
PSO824G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 7.0e-40 168.3 202 45.0
Peaxi162Scf00247g00005 Petunia axillaris HOM05D005944 ORTHO05D007188 2.9e-38 162.9 145 60.0
Sopen11g028870 Solanum pennellii HOM05D010581 ORTHO05D012655 3.8e-38 162.5 158 58.2
Actinidia14678 Actinidia chinensis HOM05D005944 ORTHO05D007188 4.3e-37 159.1 132 62.1
PSO832G4257 Papaver somniferum HOM05D005944 ORTHO05D007188 2.8e-36 156.4 218 40.8
Solyc11g071190.3 Solanum lycopersicum HOM05D005944 ORTHO05D007188 4.7e-36 155.6 137 61.3
PSO832G3272 Papaver somniferum HOM05D005944 ORTHO05D007188 5.2e-35 152.1 209 43.5
PSO173G0086 Papaver somniferum HOM05D005944 ORTHO05D007188 4.4e-34 149.1 196 41.3
Pp3c11_3140 Physcomitrium patens HOM05D005944 ORTHO05D007188 4.9e-33 145.6 242 40.1
SEGI_16652 Sequoiadendron giganteum HOM05D005944 ORTHO05D007188 4.1e-32 142.5 219 41.1
PSO507G0019 Papaver somniferum HOM05D005944 ORTHO05D007188 1.7e-30 137.1 187 44.4
SMO281G0003 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 3.0e-30 136.3 213 39.4
SMO244G0014 Selaginella moellendorffii HOM05D005944 ORTHO05D007188 3.9e-30 136.0 228 37.3
Zm00001eb277580 Zea mays HOM05D005944 ORTHO05D007188 3.6e-28 129.4 184 41.8
CDE05G1550 Ceratophyllum demersum HOM05D005944 ORTHO05D007188 6.2e-28 128.6 124 53.2
AagrBONN_evm.TU.Sc2ySwM_228.5588 Anthoceros agrestis HOM05D005944 ORTHO05D007188 2.6e-26 123.2 248 34.3
PSO824G0035 Papaver somniferum HOM05D004877 ORTHO05D007188 3.5e-23 112.8 217 35.5
PSO173G0103 Papaver somniferum HOM05D005944 ORTHO05D007188 7.8e-23 111.7 213 34.7
Cre09.g393550 Chlamydomonas reinhardtii HOM05D005944 ORTHO05D007188 4.3e-21 105.9 256 30.5
RcHm_v2.0_Chr6g0306291 Rosa chinensis HOM05D005944 ORTHO05D007188 1.6e-12 77.4 58 56.9
RcHm_v2.0_Chr6g0306281 Rosa chinensis HOM05D005944 ORTHO05D007188 6.8e-11 72.0 56 53.6
C02p05290 Brassica napus HOM05D005944 ORTHO05D007188 2.0e-10 70.5 165 32.1
RcHm_v2.0_Chr6g0306391 Rosa chinensis HOM05D005944 ORTHO05D007188 2.0e-10 70.5 100 37.0
BolC2t06477H Brassica oleracea HOM05D005944 ORTHO05D007188 7.6e-10 68.6 165 31.5
MCO02G382 Micromonas commoda HOM05D005944 ORTHO05D007188 2.9e-09 66.6 278 24.5
Mapoly0068s0072 Marchantia polymorpha HOM05D005944 ORTHO05D007188 8.4e-09 65.1 165 29.1


User provided reference genes

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