Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15047_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 4.8e-70 267.7 134 100.0
Ca_15045_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 6.8e-32 141.0 186 46.2
Psat5g147920 Pisum sativum HOM05D000307 ORTHO05D000166 8.1e-25 117.5 138 46.4
Psat5g147400 Pisum sativum HOM05D000307 ORTHO05D000166 1.4e-21 106.7 139 43.9
Medtr2g016210 Medicago truncatula HOM05D000307 ORTHO05D000166 9.2e-21 104.0 160 40.6
Ca_15044_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 4.6e-20 101.7 119 51.3
Medtr3g031100 Medicago truncatula HOM05D000307 ORTHO05D000166 4.3e-18 95.1 164 38.4
Ca_13799_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 9.5e-18 94.0 157 36.9
Psat5g149320 Pisum sativum HOM05D000307 ORTHO05D000166 9.5e-18 94.0 85 56.5
Ca_13648_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 1.2e-17 93.6 156 37.8
Psat5g149120 Pisum sativum HOM05D000307 ORTHO05D000166 1.7e-14 83.2 136 38.2
Medtr3g465410 Medicago truncatula HOM05D000307 ORTHO05D000166 9.2e-13 77.4 87 46.0
Medtr4g063790 Medicago truncatula HOM05D000307 ORTHO05D000166 2.1e-12 76.3 87 44.8
Medtr3g467080 Medicago truncatula HOM05D000307 ORTHO05D000166 6.0e-12 74.7 77 49.4
Ca_15043_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 1.3e-11 73.6 61 60.7
TPR.G27382 Trifolium pratense HOM05D000307 ORTHO05D000166 1.7e-11 73.2 124 37.9
Psat5g149160 Pisum sativum HOM05D000307 ORTHO05D000166 3.0e-11 72.4 135 35.6
Psat5g150680 Pisum sativum HOM05D000307 ORTHO05D000166 3.9e-11 72.0 139 36.7
Psat5g149240 Pisum sativum HOM05D000307 ORTHO05D000166 8.6e-11 70.9 156 32.7
TPR.G27721 Trifolium pratense HOM05D000307 ORTHO05D000166 8.6e-11 70.9 101 41.6
TPR.G14754 Trifolium pratense HOM05D000307 ORTHO05D000166 1.5e-10 70.1 90 40.0
TPR.G15860 Trifolium pratense HOM05D000307 ORTHO05D000166 3.3e-10 68.9 81 45.7
Glyma.18G053500 Glycine max HOM05D000307 ORTHO05D000166 1.2e-09 67.0 134 39.6
TPR.G15867 Trifolium pratense HOM05D000307 ORTHO05D000166 1.6e-09 66.6 80 42.5
Medtr3g031240 Medicago truncatula HOM05D000307 ORTHO05D000166 3.6e-09 65.5 83 41.0
Prupe.1G533700 Prunus persica HOM05D000307 ORTHO05D000166 4.7e-09 65.1 144 35.4
TPR.G37862 Trifolium pratense HOM05D000307 ORTHO05D000166 6.2e-09 64.7 85 42.4
Ca_15042_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 1.8e-08 63.2 146 35.6
Lj4g0004882 Lotus japonicus HOM05D000307 ORTHO05D000166 2.4e-08 62.8 75 44.0
Lj4g0006124 Lotus japonicus HOM05D000307 ORTHO05D000166 2.4e-08 62.8 75 44.0
Lj4g0007237 Lotus japonicus HOM05D000307 ORTHO05D000166 2.4e-08 62.8 75 44.0
Lj4g0012176 Lotus japonicus HOM05D000307 ORTHO05D000166 2.4e-08 62.8 75 44.0
Lj4g0012393 Lotus japonicus HOM05D000307 ORTHO05D000166 2.4e-08 62.8 75 44.0
Lj4g0017653 Lotus japonicus HOM05D000307 ORTHO05D000166 2.4e-08 62.8 78 42.3
Lj4g0018608 Lotus japonicus HOM05D000307 ORTHO05D000166 2.4e-08 62.8 75 44.0
Lj4g0021048 Lotus japonicus HOM05D000307 ORTHO05D000166 2.4e-08 62.8 75 44.0
Lj4g0021083 Lotus japonicus HOM05D000307 ORTHO05D000166 2.4e-08 62.8 78 42.3
Lj4g0024546 Lotus japonicus HOM05D000307 ORTHO05D000166 2.4e-08 62.8 75 44.0
Lj4g0025943 Lotus japonicus HOM05D000307 ORTHO05D000166 2.4e-08 62.8 75 44.0
Lj4g0013065 Lotus japonicus HOM05D000307 ORTHO05D000166 4.0e-08 62.0 75 44.0
Medtr3g466980 Medicago truncatula HOM05D000307 ORTHO05D000166 5.2e-08 61.6 126 31.7
Lalb_Chr18g0054831 Lupinus albus HOM05D000307 ORTHO05D000166 6.8e-08 61.2 116 37.9
Lalb_Chr21g0313611 Lupinus albus HOM05D000307 ORTHO05D000166 6.8e-08 61.2 116 37.9
Medtr2g035580 Medicago truncatula HOM05D000307 ORTHO05D000166 8.9e-08 60.8 76 42.1
TPR.G26737 Trifolium pratense HOM05D000307 ORTHO05D000166 8.9e-08 60.8 91 39.6
Lj6g0013084 Lotus japonicus HOM05D000307 ORTHO05D000166 2.6e-07 59.3 75 42.7
Psat5g146720 Pisum sativum HOM05D000307 ORTHO05D000166 2.6e-07 59.3 69 42.0
Potri.005G002400 Populus trichocarpa HOM05D000307 ORTHO05D000166 3.4e-07 58.9 84 38.1
Psat5g149040 Pisum sativum HOM05D000307 ORTHO05D000166 5.8e-07 58.2 101 30.7
VMungo1383G0696 Vigna mungo HOM05D000307 ORTHO05D000166 7.6e-07 57.8 83 37.3
Glyma.11G160200 Glycine max HOM05D000307 ORTHO05D000166 9.9e-07 57.4 109 36.7
TPR.G13628 Trifolium pratense HOM05D000307 ORTHO05D000166 9.9e-07 57.4 140 35.7
Lalb_Chr15g0086391 Lupinus albus HOM05D000307 ORTHO05D000166 1.3e-06 57.0 73 43.8
Glyma.18G053000 Glycine max HOM05D000307 ORTHO05D000166 1.7e-06 56.6 73 38.4
Lalb_Chr15g0087771 Lupinus albus HOM05D000307 ORTHO05D000166 1.7e-06 56.6 142 33.1
Glyma.11G214600 Glycine max HOM05D000307 ORTHO05D000166 2.2e-06 56.2 72 40.3
Lj4g0006740 Lotus japonicus HOM05D000307 ORTHO05D000166 2.2e-06 56.2 75 41.3
Lj4g0023178 Lotus japonicus HOM05D000307 ORTHO05D000166 2.2e-06 56.2 75 41.3
Medtr5g075380 Medicago truncatula HOM05D000307 ORTHO05D000166 2.2e-06 56.2 76 36.8
Phvul.001G228600 Phaseolus vulgaris HOM05D000307 ORTHO05D000166 2.2e-06 56.2 83 36.1
Sc17g0006780 Simmondsia chinensis HOM05D000307 ORTHO05D000166 2.2e-06 56.2 76 40.8
DCAR_007932 Daucus carota HOM05D000307 ORTHO05D000166 2.9e-06 55.8 75 41.3
DCAR_007934 Daucus carota HOM05D000307 ORTHO05D000166 2.9e-06 55.8 75 41.3
Glyma.18G042000 Glycine max HOM05D000307 ORTHO05D000166 2.9e-06 55.8 82 36.6
Peaxi162Scf00487g00043 Petunia axillaris HOM05D000307 ORTHO05D000166 2.9e-06 55.8 76 43.4
TPR.G17576 Trifolium pratense HOM05D000307 ORTHO05D000166 2.9e-06 55.8 72 38.9
VMungo0540G1801 Vigna mungo HOM05D000307 ORTHO05D000166 2.9e-06 55.8 143 32.2
Glyma.18G053800 Glycine max HOM05D000307 ORTHO05D000166 3.8e-06 55.5 108 35.2
Lalb_Chr02g0148031 Lupinus albus HOM05D000307 ORTHO05D000166 3.8e-06 55.5 76 38.2
Lalb_Chr15g0086381 Lupinus albus HOM05D000307 ORTHO05D000166 3.8e-06 55.5 131 33.6
Peaxi162Scf00194g00005 Petunia axillaris HOM05D000307 ORTHO05D000166 3.8e-06 55.5 76 42.1
Peaxi162Scf00222g00046 Petunia axillaris HOM05D000307 ORTHO05D000166 3.8e-06 55.5 76 42.1
Peaxi162Scf00222g00424 Petunia axillaris HOM05D000307 ORTHO05D000166 3.8e-06 55.5 76 42.1
arahy.Tifrunner.gnm1.ann1.TW1RKA Arachis hypogaea HOM05D000307 ORTHO05D000166 4.9e-06 55.1 72 43.1
Cfa010997 Carpinus fangiana HOM05D000307 ORTHO05D000166 4.9e-06 55.1 150 32.0
Gohir.D08G273600 Gossypium hirsutum HOM05D000307 ORTHO05D000166 4.9e-06 55.1 75 40.0
Gorai.004G292000 Gossypium raimondii HOM05D000307 ORTHO05D000166 4.9e-06 55.1 75 40.0
CiPaw.13G019300 Carya illinoinensis HOM05D000307 ORTHO05D000166 6.4e-06 54.7 76 36.8
Haze_15022 Corylus avellana HOM05D000307 ORTHO05D000166 6.4e-06 54.7 70 44.3
Manes.09G181500 Manihot esculenta HOM05D000307 ORTHO05D000166 6.4e-06 54.7 154 29.2
QL04p024253 Quercus lobata HOM05D000307 ORTHO05D000166 6.4e-06 54.7 75 42.7
Sed0022320 Sechium edule HOM05D000307 ORTHO05D000166 6.4e-06 54.7 140 31.4
Solyc01g102260.3 Solanum lycopersicum HOM05D000307 ORTHO05D000166 6.4e-06 54.7 78 41.0
Sopen01g044720 Solanum pennellii HOM05D000307 ORTHO05D000166 6.4e-06 54.7 78 41.0
arahy.Tifrunner.gnm1.ann1.5M65ZF Arachis hypogaea HOM05D000307 ORTHO05D000166 8.4e-06 54.3 72 43.1
Cfa004392 Carpinus fangiana HOM05D000307 ORTHO05D000166 8.4e-06 54.3 160 30.6
Ca_18733_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 8.4e-06 54.3 100 32.0
Glyma.11G186100 Glycine max HOM05D000307 ORTHO05D000166 8.4e-06 54.3 90 36.7
Gohir.A08G252000 Gossypium hirsutum HOM05D000307 ORTHO05D000166 8.4e-06 54.3 75 41.3
Nitab4.5_0000001g0130 Nicotiana tabacum HOM05D000307 ORTHO05D000166 8.4e-06 54.3 74 41.9


User provided reference genes

Program Settings