Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 4.6e-77 291.2 152 100.0
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.8e-76 289.3 150 100.0
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 1.9e-70 269.2 150 92.7
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 1.5e-67 259.6 150 88.0
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 2.8e-66 255.4 150 88.7
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 4.8e-66 254.6 150 87.3
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 1.2e-64 250.0 150 85.3
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 2.9e-63 245.4 150 87.3
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 5.5e-62 241.1 150 84.0
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 6.1e-61 237.7 159 81.1
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 1.8e-60 236.1 150 83.3
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 3.0e-60 235.3 150 84.7
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 5.1e-60 234.6 150 83.3
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 1.1e-59 233.4 150 82.7
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 1.1e-59 233.4 150 81.3
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 1.1e-59 233.4 137 89.1
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 2.5e-59 232.3 143 86.7
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 1.6e-58 229.6 151 82.1
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 4.8e-58 228.0 150 82.7
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 6.3e-58 227.6 150 81.3
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 8.2e-58 227.3 151 82.1
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 5.3e-57 224.6 150 80.7
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 5.3e-57 224.6 150 80.7
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 6.9e-57 224.2 151 78.8
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 6.9e-57 224.2 149 79.2
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 1.2e-56 223.4 152 80.9
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 1.2e-56 223.4 151 82.1
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 1.5e-56 223.0 150 80.0
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.5e-56 223.0 150 80.7
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 2.0e-56 222.6 151 80.8
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 2.6e-56 222.2 128 86.7
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 4.5e-56 221.5 151 81.5
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 5.9e-56 221.1 151 78.1
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.2e-55 219.2 151 78.8
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.2e-55 219.2 151 78.8
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 2.2e-55 219.2 151 78.8
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 6.5e-55 217.6 150 78.0
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 1.1e-54 216.9 155 78.7
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 1.4e-54 216.5 151 78.8
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 1.9e-54 216.1 151 79.5
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 2.5e-54 215.7 151 78.8
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 3.2e-54 215.3 146 82.2
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 7.2e-54 214.2 151 76.2
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 1.6e-53 213.0 151 77.5
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 1.6e-53 213.0 151 76.2
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.1e-53 212.6 150 76.7
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 2.1e-53 212.6 151 78.8
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 3.6e-53 211.8 150 77.3
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 3.6e-53 211.8 146 81.5
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 7.9e-53 210.7 151 78.1
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 7.9e-53 210.7 150 79.3
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 7.9e-53 210.7 153 77.1
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 1.0e-52 210.3 152 77.0
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 1.8e-52 209.5 151 76.8
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 3.0e-52 208.8 151 78.8
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 5.1e-52 208.0 151 76.8
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 5.1e-52 208.0 151 76.2
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 2.6e-51 205.7 152 76.3
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 4.4e-51 204.9 153 75.2
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 4.4e-51 204.9 152 75.7
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 5.7e-51 204.5 152 75.7
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 5.7e-51 204.5 151 74.8
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 1.3e-50 203.4 115 87.0
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 1.7e-50 203.0 151 76.2
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 2.8e-50 202.2 151 74.8
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 2.8e-50 202.2 152 77.6
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 3.7e-50 201.8 151 74.2
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 8.2e-50 200.7 151 74.8
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 8.2e-50 200.7 151 74.8
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 8.2e-50 200.7 151 74.8
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 8.2e-50 200.7 152 76.3
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 1.4e-49 199.9 151 74.2
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 2.4e-49 199.1 151 73.5
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 2.4e-49 199.1 152 74.3
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 3.1e-49 198.7 151 73.5
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 4.1e-49 198.4 151 73.5
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 5.3e-49 198.0 151 72.8
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 5.3e-49 198.0 151 74.2
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 6.9e-49 197.6 151 76.2
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 1.2e-48 196.8 151 72.8
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 1.5e-48 196.4 152 70.4
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 1.5e-48 196.4 151 72.8
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 1.5e-48 196.4 151 72.8
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 1.5e-48 196.4 151 72.8
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 4.5e-48 194.9 152 73.0
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 1.7e-47 193.0 152 73.7
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 3.8e-47 191.8 152 71.7
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 5.0e-47 191.4 153 72.5
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 7.9e-45 184.1 151 68.9
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 2.3e-44 182.6 149 65.8
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 3.0e-44 182.2 151 69.5
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 7.4e-43 177.6 144 68.8
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 7.0e-41 171.0 155 60.6
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 7.0e-41 171.0 151 64.9
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 9.1e-41 170.6 149 63.1
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.7e-39 166.4 138 69.6
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 1.7e-39 166.4 116 77.6
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 5.5e-38 161.4 138 66.7
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 1.0e-36 157.1 151 62.3
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 2.3e-36 156.0 117 70.1
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 5.2e-36 154.8 151 62.9
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 2.2e-34 149.4 155 57.4
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 2.4e-33 146.0 116 75.9
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 2.0e-32 142.9 157 54.1
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 1.7e-31 139.8 113 75.2
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 7.2e-30 134.4 107 72.9
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 9.4e-30 134.0 110 75.5
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 9.4e-30 134.0 151 55.6
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 5.2e-28 128.3 98 75.5
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 3.7e-26 122.1 155 53.5
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 5.2e-20 101.7 107 61.7
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 4.9e-18 95.1 70 80.0
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 1.0e-15 87.4 143 40.6
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 2.9e-15 85.9 99 59.6
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 1.9e-14 83.2 80 65.0
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 4.3e-14 82.0 113 54.0
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 5.6e-14 81.6 90 61.1
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 2.1e-13 79.7 69 58.0
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 6.1e-13 78.2 60 75.0
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 8.0e-13 77.8 60 75.0
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 1.8e-12 76.6 60 73.3
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 1.8e-12 76.6 60 73.3
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 5.2e-12 75.1 142 39.4
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 1.5e-11 73.6 61 73.8
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 2.6e-11 72.8 60 71.7
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 1.7e-10 70.1 60 71.7
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 2.9e-10 69.3 98 55.1
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 3.7e-10 68.9 105 52.4
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 1.2e-08 63.9 139 38.1
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 1.2e-08 63.9 97 49.5
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 1.6e-08 63.5 44 77.3
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 2.7e-08 62.8 44 77.3
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 5.9e-08 61.6 44 75.0
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 1.3e-07 60.5 94 53.2
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 3.9e-07 58.9 50 72.0
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 3.9e-07 58.9 70 57.1
Sabra04G0079400 Salix brachista HOM05D005631 ORTHO05D006765 1.5e-06 57.0 80 51.2
BcaC02g08205 Brassica carinata HOM05D005631 ORTHO05D006765 2.5e-06 56.2 47 70.2


User provided reference genes

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