Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_14744_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 2.0e-152 542.3 264 100.0
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 2.6e-107 392.5 258 78.3
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 2.3e-55 219.9 118 89.8
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 4.9e-42 175.6 88 95.5
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 4.9e-42 175.6 88 95.5
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 4.9e-42 175.6 88 95.5
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 4.9e-42 175.6 100 85.0
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 4.9e-42 175.6 88 95.5
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 4.9e-42 175.6 88 95.5
TPR.G39619 Trifolium pratense HOM05D007194 ORTHO05D009182 4.9e-42 175.6 88 95.5
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 8.4e-42 174.9 88 95.5
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 8.4e-42 174.9 88 95.5
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 8.4e-42 174.9 88 95.5
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 8.4e-42 174.9 88 95.5
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 8.4e-42 174.9 88 95.5
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 8.4e-42 174.9 88 95.5
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 8.4e-42 174.9 88 95.5
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 8.4e-42 174.9 88 95.5
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 8.4e-42 174.9 88 95.5
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 8.4e-42 174.9 88 95.5
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 8.4e-42 174.9 88 95.5
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 8.4e-42 174.9 100 85.0
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 1.4e-41 174.1 88 94.3
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 1.9e-41 173.7 88 94.3
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 2.4e-41 173.3 88 93.2
QL93p0053_0961 Quercus lobata HOM05D007194 ORTHO05D009182 2.4e-41 173.3 100 83.0
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 2.4e-41 173.3 88 94.3
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 7.1e-41 171.8 88 94.3
ECA039G0021 Erigeron canadensis HOM05D007194 ORTHO05D009182 2.1e-40 170.2 87 92.0
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 2.1e-40 170.2 87 92.0
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 2.1e-40 170.2 87 92.0
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 2.1e-40 170.2 87 92.0
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 2.1e-40 170.2 87 92.0
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 2.1e-40 170.2 87 92.0
TWI15G0311 Tripterygium wilfordii HOM05D007194 ORTHO05D009182 2.1e-40 170.2 88 92.0
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 2.7e-40 169.9 100 82.0
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 3.5e-40 169.5 88 94.3
Lj2P1235T102 Lonicera japonica HOM05D007194 ORTHO05D009182 3.5e-40 169.5 88 94.3
Sed0000988 Sechium edule HOM05D007194 ORTHO05D009182 3.5e-40 169.5 88 92.0
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 3.5e-40 169.5 88 92.0
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 6.0e-40 168.7 88 92.0
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 1.7e-39 167.2 88 93.2
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 3.9e-39 166.0 88 89.8
Eucgr.I01863 Eucalyptus grandis HOM05D007194 ORTHO05D009182 5.1e-39 165.6 88 90.9
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 5.1e-39 165.6 88 92.0
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 6.6e-39 165.2 100 81.0
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 6.6e-39 165.2 88 92.0
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 8.7e-39 164.9 88 92.0
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 8.7e-39 164.9 87 88.5
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 8.7e-39 164.9 88 92.0
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 1.1e-38 164.5 88 89.8
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.1e-38 164.5 88 89.8
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.1e-38 164.5 88 89.8
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 1.1e-38 164.5 88 89.8
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 1.9e-38 163.7 100 80.0
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 2.8e-37 159.8 153 62.1
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 2.8e-37 159.8 88 89.8
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 4.8e-37 159.1 88 90.9
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 4.8e-37 159.1 88 86.4
Lj1P486T6 Lonicera japonica HOM05D007194 ORTHO05D009182 8.1e-37 158.3 88 87.5
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 1.1e-36 157.9 87 85.1
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 1.8e-36 157.1 86 88.4
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 2.4e-36 156.8 78 94.9
EL10Ac8g19071 Beta vulgaris HOM05D007194 ORTHO05D009182 4.0e-36 156.0 100 77.0
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.2e-34 150.2 88 80.7
ATR0693G113 Amborella trichopoda HOM05D007194 ORTHO05D009182 5.4e-33 145.6 88 83.0
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 2.1e-32 143.7 87 83.9
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 2.7e-32 143.3 70 95.7
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 1.0e-31 141.4 73 90.4
Glyma.19G075000 Glycine max HOM05D007194 ORTHO05D009182 1.7e-31 140.6 68 97.1
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.3e-31 140.2 88 80.7
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 6.6e-31 138.7 88 80.7
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 8.7e-31 138.3 88 76.1
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 1.1e-30 137.9 88 78.4
CAN.G122.10 Capsicum annuum HOM05D007194 ORTHO05D009182 7.4e-30 135.2 68 94.1
CAN.G78.2 Capsicum annuum HOM05D007194 ORTHO05D009182 2.1e-29 133.7 67 94.0
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 2.8e-29 133.3 74 85.1
Gohir.A02G088502 Gossypium hirsutum HOM05D007194 ORTHO05D009182 4.8e-29 132.5 69 89.9
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 4.8e-29 132.5 89 77.5
CAN.G889.9 Capsicum annuum HOM05D007194 ORTHO05D009182 3.4e-27 126.3 74 86.5
Cc00_g01640 Coffea canephora HOM05D007194 ORTHO05D044666 5.8e-27 125.6 132 46.2
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 6.4e-26 122.1 68 86.8
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 8.4e-26 121.7 80 76.2
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 9.3e-25 118.2 67 85.1
CAN.G1542.2 Capsicum annuum HOM05D007194 ORTHO05D009182 3.5e-24 116.3 67 79.1
Manes.06G014501 Manihot esculenta HOM05D007194 ORTHO05D009182 1.0e-23 114.8 64 85.9
Peaxi162Scf00174g01622 Petunia axillaris HOM05D000219 ORTHO05D000226 1.3e-23 114.4 60 91.7
TAR625G1253 Trochodendron aralioides HOM05D007194 ORTHO05D009182 2.8e-21 106.7 60 88.3
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 3.1e-20 103.2 87 64.4
Haze_27474 Corylus avellana HOM05D007194 ORTHO05D009182 8.4e-18 95.1 94 48.9
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 1.2e-16 91.3 48 89.6
ECA039G0032 Erigeron canadensis HOM05D007194 ORTHO05D044666 1.0e-15 88.2 167 37.1
SHI26663 Sapria himalayana HOM05D007194 ORTHO05D009182 1.0e-15 88.2 67 68.7
CAN.G380.6 Capsicum annuum HOM05D007194 ORTHO05D009182 2.5e-14 83.6 54 77.8
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 8.2e-13 78.6 111 34.2
CAN.G1134.4 Capsicum annuum HOM05D007194 ORTHO05D009182 3.4e-11 73.2 58 63.8
PGSC0003DMG400042571 Solanum tuberosum HOM05D007194 ORTHO05D009182 3.8e-10 69.7 45 77.8
Nitab4.5_0005853g0060 Nicotiana tabacum HOM05D068302 ORTHO05D013824 4.2e-09 66.2 70 51.4
HanXRQChr05g0135281 Helianthus annuus HOM05D007194 ORTHO05D009182 5.5e-09 65.9 34 88.2
Phvul.007G104600 Phaseolus vulgaris HOM05D007194 ORTHO05D009182 2.1e-08 63.9 42 78.6


User provided reference genes

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