Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 5.2e-232 807.4 413 100.0
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 3.3e-194 681.8 426 84.3
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 1.4e-192 676.4 421 83.6
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 1.6e-185 652.9 431 79.8
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 8.8e-163 577.4 417 74.3
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 5.7e-162 574.7 416 74.0
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 1.4e-160 570.1 422 71.6
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 1.8e-160 569.7 420 71.9
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 6.9e-160 567.8 424 72.9
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 2.5e-157 559.3 419 72.3
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 3.0e-155 552.4 343 80.5
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 3.9e-155 552.0 343 80.8
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 4.0e-139 498.8 377 67.6
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 5.7e-138 495.0 400 65.5
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 4.1e-136 488.8 406 64.8
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 1.2e-135 487.3 366 68.0
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 4.5e-135 485.3 380 66.8
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 1.3e-134 483.8 371 66.6
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 3.8e-134 482.3 375 66.1
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 5.0e-134 481.9 369 68.0
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 6.5e-134 481.5 371 68.5
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 8.5e-134 481.1 377 66.6
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 4.2e-133 478.8 382 66.2
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 1.2e-132 477.2 401 64.1
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.0e-131 474.2 366 68.0
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.4e-131 473.8 366 67.8
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 2.3e-131 473.0 414 62.6
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 2.6e-130 469.5 366 66.4
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 3.4e-130 469.2 366 67.8
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 1.3e-129 467.2 364 65.4
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.7e-129 466.8 433 61.0
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 2.8e-129 466.1 417 60.2
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 4.9e-129 465.3 382 63.1
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 8.3e-129 464.5 391 62.4
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 8.3e-129 464.5 416 60.1
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 2.4e-128 463.0 363 65.0
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 9.2e-128 461.1 378 64.0
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 9.2e-128 461.1 344 69.2
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 1.2e-127 460.7 382 62.8
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 1.2e-127 460.7 363 64.7
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 1.2e-127 460.7 433 60.7
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 2.7e-127 459.5 340 70.6
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 2.7e-127 459.5 417 58.8
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 5.9e-127 458.4 376 63.8
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 1.7e-126 456.8 343 68.5
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 5.0e-126 455.3 397 60.7
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 6.6e-126 454.9 385 64.9
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 8.6e-126 454.5 377 63.1
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 1.1e-125 454.1 382 63.1
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 1.5e-125 453.8 344 67.7
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 3.3e-125 452.6 380 63.2
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 5.6e-125 451.8 375 63.2
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 9.5e-125 451.1 371 63.3
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 1.2e-124 450.7 377 61.8
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 1.2e-124 450.7 418 58.9
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 1.2e-124 450.7 340 69.1
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 2.8e-124 449.5 403 59.6
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 3.6e-124 449.1 414 58.9
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 3.6e-124 449.1 364 65.1
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 4.7e-124 448.7 377 62.6
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 4.7e-124 448.7 385 61.3
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 6.1e-124 448.4 339 69.6
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.4e-123 447.2 377 62.3
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 1.4e-123 447.2 364 60.4
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 2.3e-123 446.4 422 57.1
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 3.0e-123 446.0 376 62.2
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 4.0e-123 445.7 432 56.7
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 4.4e-122 442.2 383 62.1
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 4.4e-122 442.2 376 61.4
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 4.4e-122 442.2 370 62.4
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 9.8e-122 441.0 344 65.1
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 9.8e-122 441.0 333 67.0
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 6.4e-121 438.3 449 54.8
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 1.1e-120 437.6 344 64.8
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 7.0e-120 434.9 306 71.6
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 9.2e-120 434.5 390 59.7
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 1.6e-119 433.7 375 64.3
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 1.6e-119 433.7 363 63.1
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 4.6e-119 432.2 335 66.6
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 1.0e-118 431.0 329 67.2
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 5.0e-118 428.7 373 64.1
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 8.6e-118 427.9 377 59.7
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 1.9e-117 426.8 351 63.2
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 1.9e-117 426.8 420 55.2
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 2.1e-116 423.3 338 63.6
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 1.0e-115 421.0 371 61.7
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 2.3e-115 419.9 362 60.2
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 8.9e-115 417.9 340 65.6
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 1.7e-113 413.7 382 59.2
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 3.7e-113 412.5 333 61.9
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 2.7e-111 406.4 261 80.5
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 1.0e-110 404.4 366 60.4
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 3.5e-103 379.4 293 66.6
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 1.2e-95 354.4 241 73.9
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 2.5e-93 346.7 379 53.3
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 4.0e-91 339.3 396 49.0
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 3.2e-88 329.7 377 51.7
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 3.9e-86 322.8 360 50.8
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 4.5e-82 309.3 229 69.0
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.0e-78 298.1 213 71.4
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 9.3e-72 275.0 201 69.2
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 1.8e-70 270.8 209 68.9
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 1.3e-68 264.6 341 45.2
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 1.8e-67 260.8 336 42.0
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 2.6e-66 256.9 338 45.3
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 1.9e-56 224.2 339 39.5
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 1.8e-54 217.6 223 51.1
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 1.4e-46 191.4 189 55.0
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 8.5e-33 145.6 178 50.0
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 2.7e-31 140.6 242 35.5
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 2.7e-31 140.6 80 85.0
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 1.8e-22 111.3 110 57.3
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 5.7e-21 106.3 103 57.3
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 1.7e-20 104.8 94 61.7
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 2.2e-20 104.4 112 48.2
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 1.6e-18 98.2 147 43.5
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 2.7e-18 97.4 340 27.1
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 9.5e-16 89.0 316 28.2
HanXRQChr08g0214621 Helianthus annuus HOM05D006898 ORTHO05D008506 4.3e-08 63.5 36 77.8
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.6e-07 61.6 135 30.4


User provided reference genes

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