Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_12811_v3 Cicer arietinum L. HOM05D006435 ORTHO05D008262 8.4e-73 276.9 142 100.0
Medtr1g008300 Medicago truncatula HOM05D006435 ORTHO05D008262 1.4e-64 249.6 141 90.1
TPR.G12017 Trifolium pratense HOM05D006435 ORTHO05D008262 6.7e-62 240.7 141 89.4
arahy.Tifrunner.gnm1.ann1.463B8J Arachis hypogaea HOM05D006435 ORTHO05D008262 2.1e-60 235.7 139 87.1
arahy.Tifrunner.gnm1.ann1.W16L9Q Arachis hypogaea HOM05D006435 ORTHO05D008262 2.1e-60 235.7 139 87.1
Lj1g0009240 Lotus japonicus HOM05D006435 ORTHO05D008262 1.1e-59 233.4 141 85.1
Glyma.17G190400 Glycine max HOM05D006435 ORTHO05D008262 2.0e-58 229.2 141 85.8
CsaV3_3G047410 Cucumis sativus L. HOM05D006435 ORTHO05D008262 2.2e-57 225.7 140 82.9
VMungo0647G0379 Vigna mungo HOM05D006435 ORTHO05D008262 2.9e-57 225.3 139 84.2
ClCG11G014010 Citrullus lanatus HOM05D006435 ORTHO05D008262 5.0e-57 224.6 130 84.6
QL12p026394 Quercus lobata HOM05D006435 ORTHO05D008262 8.5e-57 223.8 135 85.2
MELO3C003582.2 Cucumis melo HOM05D006435 ORTHO05D008262 1.1e-56 223.4 140 80.0
Phvul.001G078600 Phaseolus vulgaris HOM05D006435 ORTHO05D008262 1.4e-56 223.0 138 84.8
CARHR187680 Cardamine hirsuta HOM05D006435 ORTHO05D008262 3.2e-56 221.9 140 81.4
Aa31LG11G4730 Aethionema arabicum HOM05D006435 ORTHO05D008262 4.2e-56 221.5 140 80.7
AL6G37530 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 4.2e-56 221.5 140 80.7
BcaB07g29986 Brassica carinata HOM05D006435 ORTHO05D008262 7.2e-56 220.7 140 80.7
BcaC03g17897 Brassica carinata HOM05D006435 ORTHO05D008262 7.2e-56 220.7 140 80.7
C02p59390 Brassica napus HOM05D006435 ORTHO05D008262 7.2e-56 220.7 140 80.7
BraA02t08928Z Brassica rapa HOM05D006435 ORTHO05D008262 7.2e-56 220.7 140 80.7
CiPaw.07G207200 Carya illinoinensis HOM05D006435 ORTHO05D008262 9.3e-56 220.3 135 83.7
Lalb_Chr22g0360991 Lupinus albus HOM05D006435 ORTHO05D008262 9.3e-56 220.3 139 83.5
Carub.0006s2947 Capsella rubella HOM05D006435 ORTHO05D008262 1.2e-55 219.9 140 80.0
CSS0040195 Camellia sinensis var. sinensis HOM05D006435 ORTHO05D008262 1.6e-55 219.5 135 82.2
TAR624G0864 Trochodendron aralioides HOM05D006435 ORTHO05D008262 1.6e-55 219.5 140 80.7
SGA_v2.0_scaffold280G46829 Striga asiatica HOM05D006435 ORTHO05D008262 2.7e-55 218.8 141 76.6
Rhsim02G0182200 Rhododendron simsii HOM05D006435 ORTHO05D008262 3.6e-55 218.4 140 78.6
vmacro11085 Vaccinium macrocarpon HOM05D006435 ORTHO05D008262 3.6e-55 218.4 140 76.4
GSVIVG01035670001 Vitis vinifera HOM05D006435 ORTHO05D008262 6.1e-55 217.6 140 77.9
Sp2g21890 Schrenkiella parvula HOM05D006435 ORTHO05D008262 7.9e-55 217.2 136 81.6
CANSAT80G2129 Cannabis sativa HOM05D006435 ORTHO05D008262 1.0e-54 216.9 136 78.7
Prupe.1G452600 Prunus persica HOM05D006435 ORTHO05D008262 1.3e-54 216.5 136 82.4
Hma1.2p1_0140F.1_g063520 Hydrangea macrophylla HOM05D006435 ORTHO05D008262 2.3e-54 215.7 139 80.6
Sed0025420 Sechium edule HOM05D006435 ORTHO05D008262 3.0e-54 215.3 139 79.9
THA.LOC104815054 Tarenaya hassleriana HOM05D006435 ORTHO05D008262 3.0e-54 215.3 140 76.4
AUR62009330 Chenopodium quinoa HOM05D006435 ORTHO05D008262 3.9e-54 214.9 139 82.0
AUR62023016 Chenopodium quinoa HOM05D006435 ORTHO05D008262 3.9e-54 214.9 139 82.0
DCAR_007705 Daucus carota HOM05D006435 ORTHO05D008262 3.9e-54 214.9 139 77.7
Ah.16g105260 Amaranthus hybridus HOM05D006435 ORTHO05D008262 6.7e-54 214.2 140 79.3
Oeu063249.1 Olea europaea HOM05D006435 ORTHO05D008262 6.7e-54 214.2 139 77.7
Thhalv10004692m.g Eutrema salsugineum HOM05D006435 ORTHO05D008262 8.7e-54 213.8 140 77.1
TWI32G0701 Tripterygium wilfordii HOM05D006435 ORTHO05D008262 8.7e-54 213.8 135 80.7
EL10Ac2g04073 Beta vulgaris HOM05D006435 ORTHO05D008262 1.5e-53 213.0 140 80.7
Duzib187G0700 Durio zibethinus HOM05D006435 ORTHO05D008262 1.5e-53 213.0 140 77.1
Cpa.g.sc78.80 Carica papaya HOM05D006435 ORTHO05D008262 2.5e-53 212.2 140 74.3
Hund19545 Selenicereus undatus HOM05D006435 ORTHO05D008262 2.5e-53 212.2 140 77.9
Eucgr.L02138 Eucalyptus grandis HOM05D006435 ORTHO05D008262 4.3e-53 211.5 140 75.0
Manes.03G062800 Manihot esculenta HOM05D006435 ORTHO05D008262 4.3e-53 211.5 135 77.8
Aqoxy7G01634 Aquilegia oxysepala HOM05D006435 ORTHO05D008262 5.7e-53 211.1 139 79.1
Haze_21849 Corylus avellana HOM05D006435 ORTHO05D008262 5.7e-53 211.1 135 81.5
MD15G1097700 Malus domestica HOM05D006435 ORTHO05D008262 5.7e-53 211.1 136 81.6
Potri.018G037300 Populus trichocarpa HOM05D006435 ORTHO05D008262 5.7e-53 211.1 135 78.5
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 7.4e-53 210.7 139 74.8
Nitab4.5_0003338g0080 Nicotiana tabacum HOM05D006435 ORTHO05D008262 9.7e-53 210.3 139 75.5
Eucgr.C01580 Eucalyptus grandis HOM05D006435 ORTHO05D008262 1.3e-52 209.9 140 74.3
MSTRG.11716 Avicennia marina HOM05D006435 ORTHO05D008262 1.6e-52 209.5 135 77.8
Gohir.A05G048400 Gossypium hirsutum HOM05D006435 ORTHO05D008262 2.2e-52 209.1 139 78.4
Gohir.D05G050300 Gossypium hirsutum HOM05D006435 ORTHO05D008262 2.2e-52 209.1 139 78.4
Nn2g11721 Nelumbo nucifera HOM05D006435 ORTHO05D008262 2.2e-52 209.1 140 75.7
Solyc08g068270.3 Solanum lycopersicum HOM05D006435 ORTHO05D008262 2.2e-52 209.1 136 77.9
Sopen08g022120 Solanum pennellii HOM05D006435 ORTHO05D008262 2.2e-52 209.1 136 77.9
Thecc.09G039800 Theobroma cacao HOM05D006435 ORTHO05D008262 2.8e-52 208.8 140 76.4
Cc00_g17690 Coffea canephora HOM05D006435 ORTHO05D008262 3.7e-52 208.4 139 77.0
SalBow4G2069 Salvia bowleyana HOM05D006435 ORTHO05D008262 3.7e-52 208.4 138 76.8
FAN20G0337 Fragaria x ananassa HOM05D006435 ORTHO05D008262 6.3e-52 207.6 140 76.4
MBI01_g28042_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 6.3e-52 207.6 139 75.5
Cfa013344 Carpinus fangiana HOM05D006435 ORTHO05D008262 8.2e-52 207.2 135 80.7
Gorai.009G051800 Gossypium raimondii HOM05D006435 ORTHO05D008262 8.2e-52 207.2 139 78.4
Migut.A00245 Erythranthe guttata HOM05D006435 ORTHO05D008262 1.1e-51 206.8 139 74.8
FvH4_2g36120 Fragaria vesca HOM05D006435 ORTHO05D008262 1.1e-51 206.8 140 75.7
Lj8C603T5 Lonicera japonica HOM05D006435 ORTHO05D008262 1.1e-51 206.8 140 76.4
PGSC0003DMG400014515 Solanum tuberosum HOM05D006435 ORTHO05D008262 1.1e-51 206.8 136 76.5
FAN27G2865 Fragaria x ananassa HOM05D006435 ORTHO05D008262 1.4e-51 206.5 140 75.7
HPP92_001799 Vanilla planifolia HOM05D006435 ORTHO05D008262 1.4e-51 206.5 138 76.1
Atru.chr7.2160 Acer truncatum HOM05D006435 ORTHO05D008262 1.8e-51 206.1 138 76.1
Actinidia31221 Actinidia chinensis HOM05D006435 ORTHO05D008262 1.8e-51 206.1 140 74.3
Peaxi162Scf00523g00529 Petunia axillaris HOM05D006435 ORTHO05D008262 4.1e-51 204.9 129 79.8
Ciclev10009372m.g Citrus clementina HOM05D006435 ORTHO05D008262 1.2e-50 203.4 135 74.8
RcHm_v2.0_Chr6g0305751 Rosa chinensis HOM05D006435 ORTHO05D008262 1.2e-50 203.4 136 77.2
CDE05G2477 Ceratophyllum demersum HOM05D006435 ORTHO05D008262 3.4e-50 201.8 141 73.8
Nitab4.5_0000052g0140 Nicotiana tabacum HOM05D006435 ORTHO05D008262 7.7e-50 200.7 142 72.5
CAN.G797.1 Capsicum annuum HOM05D006435 ORTHO05D008262 1.7e-49 199.5 141 73.8
PSO782G5114 Papaver somniferum HOM05D006435 ORTHO05D008262 2.2e-49 199.1 140 74.3
PSO832G3386 Papaver somniferum HOM05D006435 ORTHO05D008262 2.2e-49 199.1 140 74.3
HanXRQChr02g0048091 Helianthus annuus HOM05D006435 ORTHO05D008262 2.9e-49 198.7 140 75.0
Lsat_1_v5_gn_6_10980 Lactuca sativa HOM05D006435 ORTHO05D008262 3.8e-49 198.4 139 75.5
ATR0315G035 Amborella trichopoda HOM05D006435 ORTHO05D008262 4.2e-48 194.9 140 70.0
Dinv30253 Davidia involucrata HOM05D006435 ORTHO05D004219 4.2e-48 194.9 126 80.2
VMungo1215G1854 Vigna mungo HOM05D006435 ORTHO05D008262 1.2e-47 193.4 118 84.7
SEGI_13627 Sequoiadendron giganteum HOM05D006435 ORTHO05D008262 7.9e-47 190.7 139 68.3
Pp3c15_3110 Physcomitrium patens HOM05D006435 ORTHO05D008262 3.9e-46 188.3 133 74.4
Sc09g0009090 Simmondsia chinensis HOM05D006435 ORTHO05D008262 3.3e-45 185.3 138 70.3
MBI01_g28043_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 9.7e-45 183.7 136 69.1
Mapoly0109s0030 Marchantia polymorpha HOM05D006435 ORTHO05D008262 1.3e-44 183.3 143 65.7
Os05g0220600 Oryza sativa ssp. japonica HOM05D006435 ORTHO05D008262 1.4e-43 179.9 137 69.3
ECA233G4084 Erigeron canadensis HOM05D006435 ORTHO05D008262 9.1e-43 177.2 126 76.2
Zm00001eb350490 Zea mays HOM05D006435 ORTHO05D008262 9.1e-43 177.2 139 66.2
COL.COLO4_18696 Corchorus olitorius HOM05D006435 ORTHO05D008262 3.4e-42 175.3 118 79.7
Sabra18G0038100 Salix brachista HOM05D006435 ORTHO05D008262 1.3e-41 173.3 107 78.5
AagrBONN_evm.TU.Sc2ySwM_117.700 Anthoceros agrestis HOM05D006435 ORTHO05D008262 3.8e-41 171.8 125 71.2
Glyma.14G141900 Glycine max HOM05D006435 ORTHO05D008262 5.5e-40 167.9 108 82.4
SMO116G0425 Selaginella moellendorffii HOM05D006435 ORTHO05D008262 1.2e-39 166.8 141 58.9
Carub.0006s2351 Capsella rubella HOM05D006435 ORTHO05D008262 2.0e-37 159.5 138 63.0
AL6G37520 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 4.4e-37 158.3 139 62.6
AT5G25640 Arabidopsis thaliana HOM05D006435 ORTHO05D008262 1.2e-34 150.2 133 63.2
Psat6g034280 Pisum sativum HOM05D006435 ORTHO05D008262 1.2e-34 150.2 88 86.4
Ciclev10010273m.g Citrus clementina HOM05D006435 ORTHO05D008262 5.9e-34 147.9 119 64.7
PGR031G0325 Punica granatum HOM05D006435 ORTHO05D008262 5.2e-30 134.8 90 75.6
Solyc10g012245.1 Solanum lycopersicum HOM05D006435 ORTHO05D008262 1.7e-28 129.8 77 83.1
Solyc10g012295.1 Solanum lycopersicum HOM05D006435 ORTHO05D008262 2.5e-24 115.9 66 84.8
PRCOL_00005434 Prasinoderma coloniale HOM05D006435 ORTHO05D008262 1.6e-23 113.2 141 44.7
PSO782G2728 Papaver somniferum HOM05D006435 ORTHO05D008262 4.7e-23 111.7 134 44.8
MD08G1118500 Malus domestica HOM05D006435 ORTHO05D008262 6.1e-23 111.3 73 76.7
Cre16.g664801 Chlamydomonas reinhardtii HOM05D006435 ORTHO05D008262 8.8e-22 107.5 129 44.2
PSO782G5630 Papaver somniferum HOM05D006435 ORTHO05D008262 7.5e-21 104.4 124 48.4
MBI01_g46977_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 1.5e-16 90.1 78 64.1
PSO832G3154 Papaver somniferum HOM05D006435 ORTHO05D008262 7.3e-08 61.2 91 40.7


User provided reference genes

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