Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11923_v3 Cicer arietinum L. HOM05D008048 ORTHO05D010199 4.1e-63 244.6 125 100.0
Medtr1g045060 Medicago truncatula HOM05D008048 ORTHO05D010199 2.6e-41 172.2 161 56.5
Psat6g106440 Pisum sativum HOM05D008048 ORTHO05D010199 6.3e-40 167.5 154 60.4
TPR.G28751 Trifolium pratense HOM05D008048 ORTHO05D010199 1.1e-36 156.8 161 57.8
Lalb_Chr19g0128481 Lupinus albus HOM05D008048 ORTHO05D010199 6.8e-34 147.5 158 51.9
VMungo0720G0410 Vigna mungo HOM05D008048 ORTHO05D010199 2.0e-30 136.0 157 47.1
Phvul.007G271100 Phaseolus vulgaris HOM05D008048 ORTHO05D010199 2.5e-28 129.0 157 47.1
Lj6g0004811 Lotus japonicus HOM05D008048 ORTHO05D010199 4.7e-27 124.8 157 46.5
QL06p020732 Quercus lobata HOM05D008048 ORTHO05D010199 4.7e-27 124.8 109 56.9
Cfa014771 Carpinus fangiana HOM05D008048 ORTHO05D010199 8.0e-27 124.0 107 59.8
Haze_11446 Corylus avellana HOM05D008048 ORTHO05D010199 1.4e-26 123.2 107 59.8
CiPaw.02G108000 Carya illinoinensis HOM05D008048 ORTHO05D010199 2.3e-26 122.5 107 58.9
EL10Ac3g04955 Beta vulgaris HOM05D008048 ORTHO05D010199 2.0e-25 119.4 107 57.0
AUR62002183 Chenopodium quinoa HOM05D008048 ORTHO05D010199 4.4e-25 118.2 107 53.3
Rhsim04G0173500 Rhododendron simsii HOM05D008048 ORTHO05D010199 2.9e-24 115.5 107 53.3
Sc25g0003600 Simmondsia chinensis HOM05D008048 ORTHO05D010199 3.7e-24 115.2 108 55.6
TAR362G0870 Trochodendron aralioides HOM05D008048 ORTHO05D010199 4.9e-24 114.8 159 45.3
Ah.04g155360 Amaranthus hybridus HOM05D008048 ORTHO05D010199 8.3e-24 114.0 106 50.9
Sabra10G0040500 Salix brachista HOM05D008048 ORTHO05D010199 8.3e-24 114.0 100 57.0
Potri.010G067000 Populus trichocarpa HOM05D008048 ORTHO05D010199 1.4e-23 113.2 109 52.3
Sabra08G0130700 Salix brachista HOM05D008048 ORTHO05D010199 1.4e-23 113.2 109 53.2
Oeu002289.1 Olea europaea HOM05D008048 ORTHO05D010199 3.2e-23 112.1 109 53.2
Potri.008G170900 Populus trichocarpa HOM05D008048 ORTHO05D010199 3.2e-23 112.1 109 52.3
Prupe.1G046300 Prunus persica HOM05D008048 ORTHO05D010199 3.2e-23 112.1 109 53.2
Hma1.2p1_0385F.1_g141480 Hydrangea macrophylla HOM05D008048 ORTHO05D010199 7.0e-23 110.9 157 42.0
Nn1g02915 Nelumbo nucifera HOM05D008048 ORTHO05D010199 1.2e-22 110.2 107 53.3
Manes.15G044600 Manihot esculenta HOM05D008048 ORTHO05D010199 6.0e-22 107.8 109 49.5
Glyma.20G086000 Glycine max HOM05D008048 ORTHO05D010199 1.0e-21 107.1 86 61.6
RcHm_v2.0_Chr4g0394961 Rosa chinensis HOM05D008048 ORTHO05D010199 1.3e-21 106.7 94 54.3
MD13G1219500 Malus domestica HOM05D008048 ORTHO05D010199 1.7e-21 106.3 93 55.9
Sed0019169 Sechium edule HOM05D008048 ORTHO05D010199 2.3e-21 105.9 107 48.6
Gohir.D01G023415 Gossypium hirsutum HOM05D008048 ORTHO05D010199 3.0e-21 105.5 114 45.6
MELO3C023035.2 Cucumis melo HOM05D008048 ORTHO05D010199 5.0e-21 104.8 107 50.5
CsaV3_2G012520 Cucumis sativus L. HOM05D008048 ORTHO05D010199 1.9e-20 102.8 107 50.5
Gorai.002G026300 Gossypium raimondii HOM05D008048 ORTHO05D010199 1.9e-20 102.8 114 44.7
Ciclev10005562m.g Citrus clementina HOM05D008048 ORTHO05D010199 2.5e-20 102.4 94 58.5
FAN17G0666 Fragaria x ananassa HOM05D008048 ORTHO05D010199 2.5e-20 102.4 94 52.1
Lj6P622T54 Lonicera japonica HOM05D008048 ORTHO05D010199 5.6e-20 101.3 107 48.6
FvH4_4g04390 Fragaria vesca HOM05D008048 ORTHO05D010199 1.2e-19 100.1 94 51.1
Gohir.A01G025700 Gossypium hirsutum HOM05D008048 ORTHO05D010199 1.6e-19 99.8 114 43.9
CAN.G220.88 Capsicum annuum HOM05D008048 ORTHO05D010199 2.8e-19 99.0 111 44.1
FAN12G0723 Fragaria x ananassa HOM05D008048 ORTHO05D010199 4.7e-19 98.2 94 50.0
FAN12G2845 Fragaria x ananassa HOM05D008048 ORTHO05D010199 4.7e-19 98.2 94 50.0
PGR004G1266 Punica granatum HOM05D008048 ORTHO05D010199 4.7e-19 98.2 108 50.0
PGSC0003DMG400017154 Solanum tuberosum HOM05D008048 ORTHO05D010199 4.7e-19 98.2 109 44.0
FAN22G2321 Fragaria x ananassa HOM05D008048 ORTHO05D010199 6.2e-19 97.8 94 50.0
CAN.G220.87 Capsicum annuum HOM05D008048 ORTHO05D010199 8.0e-19 97.4 114 43.0
COL.COLO4_15948 Corchorus olitorius HOM05D008048 ORTHO05D010199 8.0e-19 97.4 107 44.9
Atru.chr4.1935 Acer truncatum HOM05D008048 ORTHO05D010199 1.4e-18 96.7 106 49.1
Duzib151G0082 Durio zibethinus HOM05D008048 ORTHO05D010199 1.4e-18 96.7 109 51.4
Sopen09g033500 Solanum pennellii HOM05D008048 ORTHO05D010199 4.0e-18 95.1 109 42.2
TWI73G0695 Tripterygium wilfordii HOM05D008048 ORTHO05D010199 6.8e-18 94.4 103 49.5
Peaxi162Scf00033g00292 Petunia axillaris HOM05D008048 ORTHO05D010199 8.9e-18 94.0 109 43.1
Nitab4.5_0002709g0050 Nicotiana tabacum HOM05D008048 ORTHO05D010199 1.2e-17 93.6 109 41.3
Lsat_1_v5_gn_6_68700 Lactuca sativa HOM05D008048 ORTHO05D010199 9.8e-17 90.5 110 42.7
Migut.G00487 Erythranthe guttata HOM05D008048 ORTHO05D010199 1.3e-16 90.1 109 49.5
Aqoxy5G00167 Aquilegia oxysepala HOM05D008048 ORTHO05D010199 2.2e-16 89.4 108 48.1
MSTRG.4161 Avicennia marina HOM05D008048 ORTHO05D010199 2.2e-16 89.4 109 43.1
MBI07_g18713_MAGBIO Magnolia biondii HOM05D008048 ORTHO05D010199 3.7e-16 88.6 119 42.0
Actinidia20832 Actinidia chinensis HOM05D008048 ORTHO05D010199 1.9e-15 86.3 82 54.9
SalBow3G4414 Salvia bowleyana HOM05D008048 ORTHO05D010199 1.5e-12 76.6 91 45.1
MD16G1225000 Malus domestica HOM05D008048 ORTHO05D010199 5.6e-12 74.7 74 52.7
Dinv29814 Davidia involucrata HOM05D008048 ORTHO05D010199 9.5e-12 73.9 121 38.0
ATR0736G121 Amborella trichopoda HOM05D008048 ORTHO05D010199 1.2e-11 73.6 80 46.2
GSVIVG01027901001 Vitis vinifera HOM05D008048 ORTHO05D010199 8.1e-11 70.9 83 50.6
DCAR_027338 Daucus carota HOM05D008048 ORTHO05D010199 8.9e-10 67.4 109 32.1
Cpa.g.sc44.13 Carica papaya HOM05D008048 ORTHO05D010199 2.2e-08 62.8 50 56.0
Sed0013025 Sechium edule HOM05D007245 ORTHO05D009049 8.3e-08 60.8 121 33.9
SGA_v2.0_scaffold47G17641 Striga asiatica HOM05D007245 ORTHO05D009049 8.3e-08 60.8 93 37.6
Hma1.2p1_0421F.1_g149920 Hydrangea macrophylla HOM05D007245 ORTHO05D009049 2.4e-07 59.3 93 35.5
CSS0018621 Camellia sinensis var. sinensis HOM05D007245 ORTHO05D009049 3.2e-07 58.9 111 33.3
CSS0002235 Camellia sinensis var. sinensis HOM05D007245 ORTHO05D009049 4.1e-07 58.5 111 33.3
SalBow7G3959 Salvia bowleyana HOM05D007245 ORTHO05D009049 5.4e-07 58.2 93 36.6
MSTRG.15573 Avicennia marina HOM05D007245 ORTHO05D009049 7.1e-07 57.8 93 34.4
RcHm_v2.0_Chr2g0176701 Rosa chinensis HOM05D007245 ORTHO05D009049 7.1e-07 57.8 93 37.6
Sabra02G0180800 Salix brachista HOM05D007245 ORTHO05D009049 7.1e-07 57.8 106 35.8
SGA_v2.0_scaffold34G13684 Striga asiatica HOM05D007245 ORTHO05D009049 7.1e-07 57.8 93 35.5
Gohir.A11G062100 Gossypium hirsutum HOM05D007245 ORTHO05D009049 9.2e-07 57.4 98 32.7
ClCG05G012490 Citrullus lanatus HOM05D007245 ORTHO05D009049 1.2e-06 57.0 93 35.5
MELO3C014761.2 Cucumis melo HOM05D007245 ORTHO05D009049 1.2e-06 57.0 93 35.5
CsaV3_3G020030 Cucumis sativus L. HOM05D007245 ORTHO05D009049 1.2e-06 57.0 93 35.5
FvH4_6g31080 Fragaria vesca HOM05D007245 ORTHO05D009049 1.6e-06 56.6 93 36.6
FAN05G2831 Fragaria x ananassa HOM05D007245 ORTHO05D009049 2.1e-06 56.2 93 35.5
Potri.002G237200 Populus trichocarpa HOM05D007245 ORTHO05D009049 2.1e-06 56.2 93 34.4
PGR142G1730 Punica granatum HOM05D007245 ORTHO05D009049 2.1e-06 56.2 101 31.7
TAR629G1424 Trochodendron aralioides HOM05D007245 ORTHO05D009049 2.1e-06 56.2 93 35.5
MD17G1004200 Malus domestica HOM05D007245 ORTHO05D009049 2.7e-06 55.8 93 35.5
Glyma.19G106200 Glycine max HOM05D007245 ORTHO05D009049 4.6e-06 55.1 89 37.1
Duzib187G0347 Durio zibethinus HOM05D007245 ORTHO05D009049 6.0e-06 54.7 109 30.3
MD09G1001100 Malus domestica HOM05D007245 ORTHO05D009049 6.0e-06 54.7 93 36.6
Oeu050155.1 Olea europaea HOM05D007245 ORTHO05D009049 6.0e-06 54.7 76 35.5
Prupe.7G011800 Prunus persica HOM05D007245 ORTHO05D009049 6.0e-06 54.7 93 34.4
Sed0008898 Sechium edule HOM05D007245 ORTHO05D009049 6.0e-06 54.7 121 31.4
Thecc.04G050800 Theobroma cacao HOM05D007245 ORTHO05D009049 6.0e-06 54.7 109 30.3
Aqoxy2G01225 Aquilegia oxysepala HOM05D007245 ORTHO05D009049 7.8e-06 54.3 93 33.3
COL.COLO4_13398 Corchorus olitorius HOM05D005263 ORTHO05D006891 7.8e-06 54.3 101 34.7
Dinv25610 Davidia involucrata HOM05D007245 ORTHO05D009049 7.8e-06 54.3 93 34.4
Gohir.D11G065900 Gossypium hirsutum HOM05D007245 ORTHO05D009049 7.8e-06 54.3 82 34.1
Gorai.007G071400 Gossypium raimondii HOM05D007245 ORTHO05D009049 7.8e-06 54.3 82 34.1
Peaxi162Scf00950g00032 Petunia axillaris HOM05D007245 ORTHO05D009049 7.8e-06 54.3 82 34.1


User provided reference genes

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