Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11764_v3 Cicer arietinum L. HOM05D005759 ORTHO05D007172 2.3e-93 345.5 170 100.0
TPR.G7613 Trifolium pratense HOM05D005759 ORTHO05D007172 4.6e-41 171.8 99 86.9
Psat6g094520 Pisum sativum HOM05D005759 ORTHO05D007172 2.1e-38 162.9 99 81.8
Medtr1g050730 Medicago truncatula HOM05D005759 ORTHO05D007172 1.1e-37 160.6 95 82.1
Glyma.02G165400 Glycine max HOM05D005759 ORTHO05D007172 1.3e-32 143.7 99 73.7
Phvul.007G245100 Phaseolus vulgaris HOM05D005759 ORTHO05D007172 8.6e-32 141.0 100 70.0
Lalb_Chr03g0036351 Lupinus albus HOM05D005759 ORTHO05D007172 1.1e-31 140.6 99 70.7
VMungo0720G2821 Vigna mungo HOM05D005759 ORTHO05D007172 7.3e-31 137.9 100 69.0
Lj5g0004167 Lotus japonicus HOM05D005759 ORTHO05D007172 3.1e-29 132.5 99 67.7
arahy.Tifrunner.gnm1.ann1.Y61W31 Arachis hypogaea HOM05D005759 ORTHO05D007172 8.9e-29 131.0 97 69.1
arahy.Tifrunner.gnm1.ann1.0Q505S Arachis hypogaea HOM05D005759 ORTHO05D007172 2.6e-28 129.4 99 66.7
Manes.07G091866 Manihot esculenta HOM05D005759 ORTHO05D007172 1.5e-20 103.6 102 52.9
TAR623G0127 Trochodendron aralioides HOM05D005759 ORTHO05D007172 2.0e-20 103.2 94 53.2
Potri.010G234000 Populus trichocarpa HOM05D005759 ORTHO05D007172 1.3e-19 100.5 102 49.0
Gohir.D10G206700 Gossypium hirsutum HOM05D005759 ORTHO05D007172 1.7e-19 100.1 84 57.1
Thecc.10G099000 Theobroma cacao HOM05D005759 ORTHO05D007172 2.2e-19 99.8 84 56.0
Gorai.011G232200 Gossypium raimondii HOM05D005759 ORTHO05D007172 3.8e-19 99.0 84 56.0
Cfa011218 Carpinus fangiana HOM05D005759 ORTHO05D007172 6.4e-19 98.2 91 51.6
Haze_02624 Corylus avellana HOM05D005759 ORTHO05D007172 6.4e-19 98.2 91 52.7
Sabra10G0181400 Salix brachista HOM05D005759 ORTHO05D007172 8.4e-19 97.8 93 49.5
COL.COLO4_35597 Corchorus olitorius HOM05D005759 ORTHO05D007172 1.1e-18 97.4 90 51.1
Gorai.011G232400 Gossypium raimondii HOM05D005759 ORTHO05D007172 1.1e-18 97.4 84 56.0
Duzib114G0077 Durio zibethinus HOM05D005759 ORTHO05D007172 1.9e-18 96.7 92 52.2
CiPaw.13G035800 Carya illinoinensis HOM05D005759 ORTHO05D007172 5.4e-18 95.1 91 48.4
Dinv31290 Davidia involucrata HOM05D005759 ORTHO05D007172 5.4e-18 95.1 89 50.6
Ciclev10033771m.g Citrus clementina HOM05D005759 ORTHO05D007172 9.3e-18 94.4 92 48.9
Hma1.2p1_0352F.1_g133040 Hydrangea macrophylla HOM05D005759 ORTHO05D007172 1.6e-17 93.6 84 56.0
Prupe.2G090100 Prunus persica HOM05D005759 ORTHO05D007172 2.1e-17 93.2 84 50.0
Cpa.g.sc720.1 Carica papaya HOM05D005759 ORTHO05D007172 3.5e-17 92.4 93 50.5
QL04p040912 Quercus lobata HOM05D005759 ORTHO05D007172 6.0e-17 91.7 81 50.6
CSS0028406 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 2.3e-16 89.7 90 47.8
RcHm_v2.0_Chr1g0334181 Rosa chinensis HOM05D005759 ORTHO05D007172 3.0e-16 89.4 88 50.0
MELO3C019880.2 Cucumis melo HOM05D005759 ORTHO05D007172 5.1e-16 88.6 84 48.8
MD07G1072000 Malus domestica HOM05D005759 ORTHO05D007172 5.1e-16 88.6 84 51.2
MD02G1244900 Malus domestica HOM05D005759 ORTHO05D007172 6.6e-16 88.2 84 50.0
Actinidia34708 Actinidia chinensis HOM05D005759 ORTHO05D007172 1.1e-15 87.4 93 46.2
CSS0040532 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 1.5e-15 87.0 90 46.7
Aqoxy1G00957 Aquilegia oxysepala HOM05D005759 ORTHO05D007172 1.9e-15 86.7 171 34.5
ClCG08G008080 Citrullus lanatus HOM05D005759 ORTHO05D007172 3.3e-15 85.9 84 47.6
Nn2g13981 Nelumbo nucifera HOM05D005759 ORTHO05D007172 4.3e-15 85.5 101 41.6
Sed0025588 Sechium edule HOM05D005759 ORTHO05D007172 4.3e-15 85.5 84 46.4
Atru.chr12.960 Acer truncatum HOM05D005759 ORTHO05D007172 5.6e-15 85.1 95 47.4
AL4G23090 Arabidopsis lyrata HOM05D005759 ORTHO05D007172 4.8e-14 82.0 89 41.6
C03p92620 Brassica napus HOM05D005759 ORTHO05D007172 6.2e-14 81.6 85 47.1
Thhalv10016555m.g Eutrema salsugineum HOM05D005759 ORTHO05D007172 6.2e-14 81.6 92 43.5
Sp4g11420 Schrenkiella parvula HOM05D005759 ORTHO05D007172 6.2e-14 81.6 89 44.9
A08p00720 Brassica napus HOM05D005759 ORTHO05D007172 8.1e-14 81.3 85 47.1
BraA08t32129Z Brassica rapa HOM05D005759 ORTHO05D007172 8.1e-14 81.3 85 47.1
BcaC01g01514 Brassica carinata HOM05D005759 ORTHO05D007172 1.1e-13 80.9 85 45.9
vmacro10276 Vaccinium macrocarpon HOM05D005759 ORTHO05D007172 1.4e-13 80.5 93 41.9
BolC3t21576H Brassica oleracea HOM05D005759 ORTHO05D007172 2.4e-13 79.7 81 46.9
Carub.0004s0956 Capsella rubella HOM05D005759 ORTHO05D007172 2.4e-13 79.7 104 40.4
PSO063G1818 Papaver somniferum HOM05D005759 ORTHO05D007172 5.3e-13 78.6 102 42.2
BcaB04g16965 Brassica carinata HOM05D005759 ORTHO05D007172 6.9e-13 78.2 82 45.1
Rhsim09G0144200 Rhododendron simsii HOM05D005759 ORTHO05D007172 2.6e-12 76.3 92 41.3
RhsimUnG0061600 Rhododendron simsii HOM05D005759 ORTHO05D007172 2.6e-12 76.3 92 41.3
CARHR121620 Cardamine hirsuta HOM05D005759 ORTHO05D007172 3.4e-12 75.9 89 40.4
AT2G28600 Arabidopsis thaliana HOM05D005759 ORTHO05D007172 5.8e-12 75.1 88 39.8
THA.LOC104826349 Tarenaya hassleriana HOM05D005759 ORTHO05D007172 2.9e-11 72.8 89 43.8
Nn6g35073 Nelumbo nucifera HOM05D005759 ORTHO05D007172 1.4e-10 70.5 73 45.2
CDE04G0943 Ceratophyllum demersum HOM05D005759 ORTHO05D007172 2.1e-09 66.6 63 50.8
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 1.1e-07 60.8 69 44.9
SEGI_18985 Sequoiadendron giganteum HOM05D005759 ORTHO05D007172 7.4e-07 58.2 94 31.9
ATR0820G119 Amborella trichopoda HOM05D005759 ORTHO05D007172 9.6e-07 57.8 90 34.4
Eucgr.G02716 Eucalyptus grandis HOM05D005759 ORTHO05D007172 4.8e-06 55.5 71 35.2
MBI17_g30596_MAGBIO Magnolia biondii HOM05D005759 ORTHO05D007172 8.1e-06 54.7 68 42.6


User provided reference genes

Program Settings