Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 5.2e-157 557.8 300 100.0
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 5.0e-99 365.2 308 71.1
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 1.9e-98 363.2 297 71.0
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 2.7e-97 359.4 299 69.6
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 3.2e-82 309.3 315 63.2
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 3.3e-79 299.3 294 61.2
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 1.7e-78 297.0 300 60.0
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 2.4e-77 293.1 298 61.4
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 2.2e-75 286.6 240 67.5
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 1.4e-69 267.3 299 59.2
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 1.7e-62 243.8 234 58.1
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 3.3e-58 229.6 298 49.3
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 1.6e-57 227.3 234 54.7
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 6.1e-57 225.3 235 55.3
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 1.0e-56 224.6 308 49.0
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 1.4e-56 224.2 271 51.3
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 1.4e-56 224.2 272 51.1
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 3.0e-56 223.0 307 46.3
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 5.2e-56 222.2 307 46.6
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 5.2e-56 222.2 307 49.2
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 5.2e-56 222.2 208 63.5
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 8.9e-56 221.5 298 48.3
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 8.9e-56 221.5 307 48.9
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 1.2e-55 221.1 301 47.5
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 2.0e-55 220.3 269 50.6
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 3.4e-55 219.5 305 48.5
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 5.7e-55 218.8 292 45.9
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 7.5e-55 218.4 234 54.3
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 1.7e-54 217.2 282 47.2
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 4.9e-54 215.7 284 49.6
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 6.4e-54 215.3 240 52.5
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 6.4e-54 215.3 302 48.7
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 6.4e-54 215.3 275 46.9
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 3.2e-53 213.0 299 47.2
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 1.2e-52 211.1 272 50.7
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.2e-52 211.1 238 54.6
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 2.0e-52 210.3 240 50.8
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 2.0e-52 210.3 284 46.5
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 2.7e-52 209.9 255 49.8
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 2.7e-52 209.9 272 49.6
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 3.5e-52 209.5 269 48.3
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 3.5e-52 209.5 210 55.7
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 3.5e-52 209.5 291 49.8
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 1.0e-51 208.0 271 47.2
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 1.3e-51 207.6 209 58.4
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 1.3e-51 207.6 314 46.8
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 1.7e-51 207.2 224 51.8
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 2.3e-51 206.8 203 55.7
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 2.3e-51 206.8 282 47.2
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 3.0e-51 206.5 261 48.7
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 3.9e-51 206.1 303 47.2
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 5.0e-51 205.7 289 45.7
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 8.6e-51 204.9 240 49.6
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 1.1e-50 204.5 282 46.8
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 2.5e-50 203.4 276 47.5
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 2.5e-50 203.4 228 53.5
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 2.5e-50 203.4 359 41.5
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 4.3e-50 202.6 301 45.2
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 9.5e-50 201.4 228 51.3
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 3.6e-49 199.5 284 45.8
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 8.0e-49 198.4 222 52.7
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 8.0e-49 198.4 284 45.4
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 1.0e-48 198.0 307 46.6
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 1.0e-48 198.0 257 51.4
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 1.8e-48 197.2 282 50.0
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 2.3e-48 196.8 282 45.0
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 3.1e-48 196.4 280 48.6
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 3.1e-48 196.4 273 45.4
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 6.8e-48 195.3 231 52.4
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 8.9e-48 194.9 241 51.9
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 8.9e-48 194.9 304 42.4
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 1.5e-47 194.1 297 45.1
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 3.4e-47 193.0 317 46.7
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 4.4e-47 192.6 251 46.2
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 4.4e-47 192.6 288 44.8
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 5.8e-47 192.2 211 51.2
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 9.8e-47 191.4 251 47.8
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 1.7e-46 190.7 215 53.5
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 2.2e-46 190.3 311 44.4
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 2.2e-46 190.3 291 46.4
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 2.9e-46 189.9 258 46.5
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 8.3e-46 188.3 260 47.7
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 8.3e-46 188.3 321 43.9
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 3.2e-45 186.4 306 44.4
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 3.2e-45 186.4 287 43.9
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 7.0e-45 185.3 293 44.0
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.2e-44 184.5 196 56.1
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 1.6e-44 184.1 383 36.3
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 3.5e-44 183.0 324 38.0
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 3.5e-44 183.0 252 49.2
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 5.0e-43 179.1 238 49.6
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 1.5e-42 177.6 204 54.9
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 2.5e-42 176.8 190 55.3
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 3.3e-42 176.4 208 52.4
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 6.8e-40 168.7 235 46.8
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 2.0e-39 167.2 202 50.0
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 6.0e-36 155.6 180 56.1
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.0e-35 154.8 286 39.9
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 3.2e-29 133.3 314 33.4
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 2.5e-26 123.6 181 40.3
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 5.8e-23 112.5 221 40.7
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 9.9e-23 111.7 221 38.9
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 6.0e-20 102.4 264 35.2
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 7.8e-20 102.1 95 62.1
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 9.0e-16 88.6 123 47.2
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 2.0e-15 87.4 60 68.3
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 4.9e-14 82.8 96 45.8
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 4.9e-14 82.8 147 43.5
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 3.2e-13 80.1 172 36.0
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 4.6e-12 76.3 100 41.0
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 6.7e-11 72.4 78 42.3
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.5e-10 70.5 158 38.0
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 2.5e-10 70.5 58 62.1
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 4.3e-10 69.7 68 54.4
Eucgr.H00986 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.8e-08 64.3 42 71.4
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 4.5e-07 59.7 43 65.1
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 7.6e-07 58.9 102 36.3
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 8.4e-06 55.5 59 49.2


User provided reference genes

Program Settings