Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10770_v3 Cicer arietinum L. HOM05D004189 ORTHO05D004092 4.5e-270 934.1 506 100.0
TPR.G14322 Trifolium pratense HOM05D004189 ORTHO05D004092 8.9e-133 478.0 619 54.1
Medtr1g100627 Medicago truncatula HOM05D004189 ORTHO05D004092 1.4e-130 470.7 556 57.2
Glyma.20G158500 Glycine max HOM05D004189 ORTHO05D004092 4.3e-103 379.4 553 52.3
Glyma.10G236000 Glycine max HOM05D004189 ORTHO05D004092 4.6e-89 332.8 541 47.9
Lj5g0019959 Lotus japonicus HOM05D004189 ORTHO05D004092 1.1e-87 328.2 753 39.2
VMungo0720G0841 Vigna mungo HOM05D004189 ORTHO05D004092 3.2e-82 310.1 524 46.0
Medtr1g100623 Medicago truncatula HOM05D004189 ORTHO05D004092 2.1e-78 297.4 847 34.9
Phvul.007G069800 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 1.4e-74 284.6 539 47.1
arahy.Tifrunner.gnm1.ann1.4R9DEN Arachis hypogaea HOM05D001888 ORTHO05D001842 3.7e-54 216.9 674 34.6
TPR.G14317 Trifolium pratense HOM05D004189 ORTHO05D017062 1.2e-49 201.8 584 33.6
arahy.Tifrunner.gnm1.ann1.EQ3RBX Arachis hypogaea HOM05D004189 ORTHO05D004092 2.7e-49 200.7 622 33.6
arahy.Tifrunner.gnm1.ann1.06RI6S Arachis hypogaea HOM05D004189 ORTHO05D004092 1.4e-48 198.4 697 33.4
arahy.Tifrunner.gnm1.ann1.E2ZRS1 Arachis hypogaea HOM05D004189 ORTHO05D004092 2.3e-48 197.6 610 33.6
Psat6g199400 Pisum sativum HOM05D004189 ORTHO05D004092 8.8e-48 195.7 350 44.3
Lj2g0010006 Lotus japonicus HOM05D004189 ORTHO05D004092 1.3e-35 155.2 288 44.4
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 3.2e-34 150.6 553 33.8
Gohir.D12G259100 Gossypium hirsutum HOM05D004189 ORTHO05D004092 7.2e-34 149.4 544 34.6
Gohir.A12G257800 Gossypium hirsutum HOM05D004189 ORTHO05D004092 9.4e-34 149.1 545 33.0
Lalb_Chr21g0305031 Lupinus albus HOM05D004189 ORTHO05D004092 9.4e-34 149.1 163 59.5
Lalb_Chr19g0130831 Lupinus albus HOM05D004189 ORTHO05D004092 6.8e-32 142.9 244 46.7
Phvul.004G117100 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 7.5e-31 139.4 294 39.8
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 6.3e-30 136.3 561 31.9
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 1.8e-29 134.8 559 32.0
Gorai.008G277500 Gossypium raimondii HOM05D004189 ORTHO05D004092 4.1e-29 133.7 542 33.0
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 2.0e-28 131.3 369 34.4
Cpa.g.sc107.53 Carica papaya HOM05D004189 ORTHO05D004092 3.8e-27 127.1 561 31.6
TAR374G0772 Trochodendron aralioides HOM05D004189 ORTHO05D004092 5.0e-27 126.7 502 34.1
Glyma.16G189900 Glycine max HOM05D004189 ORTHO05D004092 1.1e-26 125.6 188 47.3
QL09p014192 Quercus lobata HOM05D004189 ORTHO05D004092 6.1e-25 119.8 595 29.4
Duzib205G0656 Durio zibethinus HOM05D004189 ORTHO05D004092 2.3e-24 117.9 582 30.6
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 2.0e-23 114.8 538 32.2
Potri.015G143950 Populus trichocarpa HOM05D004189 ORTHO05D004092 1.3e-22 112.1 504 30.8
Medtr6g045273 Medicago truncatula HOM05D004189 ORTHO05D004092 1.7e-22 111.7 271 36.2
Solyc03g025810.4 Solanum lycopersicum HOM05D004189 ORTHO05D004092 1.7e-22 111.7 338 32.2
Ciclev10004574m.g Citrus clementina HOM05D004189 ORTHO05D004092 2.2e-22 111.3 611 29.5
QL09p014207 Quercus lobata HOM05D004189 ORTHO05D004092 2.8e-22 110.9 594 29.3
TWI23G0464 Tripterygium wilfordii HOM05D004189 ORTHO05D004092 2.8e-22 110.9 426 31.0
Thecc.03G176700 Theobroma cacao HOM05D004189 ORTHO05D004092 8.3e-22 109.4 316 34.5
COL.COLO4_14310 Corchorus olitorius HOM05D004189 ORTHO05D004092 2.4e-21 107.8 359 32.9
CAN.G490.32 Capsicum annuum HOM05D004189 ORTHO05D004092 4.1e-21 107.1 375 33.1
Glyma.09G139600 Glycine max HOM05D004189 ORTHO05D004092 9.2e-21 105.9 281 38.4
Glyma.16G193200 Glycine max HOM05D004189 ORTHO05D004092 1.2e-20 105.5 330 32.7
PGSC0003DMG400014293 Solanum tuberosum HOM05D004189 ORTHO05D004092 1.6e-20 105.1 340 33.5
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 2.7e-20 104.4 342 32.7
vmacro06681 Vaccinium macrocarpon HOM05D004189 ORTHO05D004092 1.3e-19 102.1 536 30.6
Nn6g33499 Nelumbo nucifera HOM05D004189 ORTHO05D004092 2.3e-19 101.3 524 31.9
Sc19g0001510 Simmondsia chinensis HOM05D004189 ORTHO05D004092 3.8e-19 100.5 645 27.4
Sopen03g004620 Solanum pennellii HOM05D004189 ORTHO05D004092 5.0e-19 100.1 348 30.5
Migut.F01119 Erythranthe guttata HOM05D004189 ORTHO05D004092 8.6e-19 99.4 460 30.9
Peaxi162Scf00444g00847 Petunia axillaris HOM05D004189 ORTHO05D004092 1.1e-18 99.0 339 32.7
Actinidia34113 Actinidia chinensis HOM05D004189 ORTHO05D004092 1.5e-18 98.6 506 28.7
TPR.G10748 Trifolium pratense HOM05D004189 ORTHO05D004092 1.5e-18 98.6 209 45.9
THA.LOC104811978 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 2.5e-18 97.8 561 30.5
Hund11746 Selenicereus undatus HOM05D004189 ORTHO05D004092 4.3e-18 97.1 584 30.0
MD01G1201000 Malus domestica HOM05D004189 ORTHO05D004092 5.6e-18 96.7 551 30.1
arahy.Tifrunner.gnm1.ann1.UM41MD Arachis hypogaea HOM05D004189 ORTHO05D004092 3.6e-17 94.0 202 38.1
Medtr1g100607 Medicago truncatula HOM05D004189 ORTHO05D004092 1.5e-15 88.6 140 50.0
AL8G26690 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 2.0e-15 88.2 527 30.0
Ca_25745_v3 Cicer arietinum L. HOM05D004189 ORTHO05D004092 2.6e-15 87.8 162 41.4
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 2.6e-15 87.8 616 26.1
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 2.6e-15 87.8 322 33.2
ECA238G1803 Erigeron canadensis HOM05D004189 ORTHO05D004092 3.4e-15 87.4 550 26.7
Cfa008320 Carpinus fangiana HOM05D004189 ORTHO05D004092 2.9e-14 84.3 515 26.8
MBI18_g30543_MAGBIO Magnolia biondii HOM05D004189 ORTHO05D004092 1.8e-13 81.6 481 28.9
HanXRQChr07g0207021 Helianthus annuus HOM05D004189 ORTHO05D004092 2.4e-13 81.3 538 29.2
EL10Ac3g05642 Beta vulgaris HOM05D004189 ORTHO05D004092 7.0e-13 79.7 364 27.7
Lj8A24G36 Lonicera japonica HOM05D004189 ORTHO05D004092 9.2e-13 79.3 276 33.3
Oeu056256.2 Olea europaea HOM05D004189 ORTHO05D004092 1.2e-12 79.0 184 34.8
BcaC03g14545 Brassica carinata HOM05D004189 ORTHO05D004092 1.6e-12 78.6 578 28.2
GSVIVG01028976001 Vitis vinifera HOM05D004189 ORTHO05D004092 2.0e-12 78.2 248 32.3
AT5G52300 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 2.7e-12 77.8 600 26.3
C02p19900 Brassica napus HOM05D004189 ORTHO05D004092 3.5e-12 77.4 578 28.5
BolC2t08123H Brassica oleracea HOM05D004189 ORTHO05D004092 3.5e-12 77.4 578 28.5
Eucgr.A02790 Eucalyptus grandis HOM05D004189 ORTHO05D004092 3.5e-12 77.4 593 27.7
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 3.5e-12 77.4 212 34.4
AUR62021191 Chenopodium quinoa HOM05D004189 ORTHO05D004092 4.6e-12 77.0 404 27.5
FAN03G0716 Fragaria x ananassa HOM05D013146 ORTHO05D004092 5.9e-12 76.6 212 34.4
Migut.F00339 Erythranthe guttata HOM05D004189 ORTHO05D004092 1.0e-11 75.9 451 29.9
CSS0007027 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 1.3e-11 75.5 380 28.4
RcHm_v2.0_Chr1g0377331 Rosa chinensis HOM05D013146 ORTHO05D004092 1.3e-11 75.5 338 31.1
CSS0002108 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 1.7e-11 75.1 390 27.4
PSO782G0005 Papaver somniferum HOM05D004189 ORTHO05D004092 3.9e-11 73.9 544 28.3
AUR62015982 Chenopodium quinoa HOM05D004189 ORTHO05D004092 5.0e-11 73.6 357 25.8
Glyma.16G183700 Glycine max HOM05D004189 ORTHO05D004092 5.0e-11 73.6 176 36.4
ATR0680G076 Amborella trichopoda HOM05D004189 ORTHO05D004092 6.6e-11 73.2 479 25.9
Glyma.16G192732 Glycine max HOM05D004189 ORTHO05D004092 8.6e-11 72.8 176 36.4
FAN06G1386 Fragaria x ananassa HOM05D013146 ORTHO05D004092 1.5e-10 72.0 594 25.9
Lsat_1_v5_gn_8_8621 Lactuca sativa HOM05D004189 ORTHO05D004092 1.5e-10 72.0 412 27.2
Lsat_1_v5_gn_2_132020 Lactuca sativa HOM05D004189 ORTHO05D004092 1.9e-10 71.6 504 26.4
Carub.0008s1240 Capsella rubella HOM05D004189 ORTHO05D004092 4.3e-10 70.5 630 25.9
A02p11900 Brassica napus HOM05D004189 ORTHO05D004092 5.6e-10 70.1 590 25.4
Prupe.2G294400 Prunus persica HOM05D004189 ORTHO05D004092 5.6e-10 70.1 323 28.8
ECA233G5127 Erigeron canadensis HOM05D004189 ORTHO05D004092 7.3e-10 69.7 277 28.5
FAN06G2021 Fragaria x ananassa HOM05D013146 ORTHO05D004092 9.5e-10 69.3 592 25.2
Psat0s2227g0040 Pisum sativum HOM05D004189 ORTHO05D004092 1.2e-09 68.9 187 34.8
PGR042G0303 Punica granatum HOM05D004189 ORTHO05D004092 1.2e-09 68.9 648 26.7
Thhalv10013021m.g Eutrema salsugineum HOM05D004189 ORTHO05D004092 2.1e-09 68.2 587 27.9
FAN10G2986 Fragaria x ananassa HOM05D013146 ORTHO05D004092 2.1e-09 68.2 171 37.4
Aa31LG3G8720 Aethionema arabicum HOM05D004189 ORTHO05D004092 8.0e-09 66.2 138 34.8
CARHR265280 Cardamine hirsuta HOM05D004189 ORTHO05D004092 8.0e-09 66.2 603 25.7
Glyma.16G192000 Glycine max HOM05D004189 ORTHO05D004092 1.0e-08 65.9 149 34.9
Glyma.16G192200 Glycine max HOM05D004189 ORTHO05D004092 1.4e-08 65.5 149 32.9
Sp6g14560 Schrenkiella parvula HOM05D004189 ORTHO05D004092 3.1e-08 64.3 184 35.9
TPR.G10757 Trifolium pratense HOM05D004189 ORTHO05D004092 3.1e-08 64.3 187 33.7
BcaB05g21946 Brassica carinata HOM05D004189 ORTHO05D004092 4.0e-08 63.9 468 27.1
CiPaw.03G106300 Carya illinoinensis HOM05D004189 ORTHO05D004092 8.9e-08 62.8 311 26.0
MELO3C003321.2 Cucumis melo HOM05D004189 ORTHO05D004092 8.9e-08 62.8 464 30.8
Dinv28441 Davidia involucrata HOM05D004189 ORTHO05D004092 1.2e-07 62.4 561 26.9
FvH4_7g29491 Fragaria vesca HOM05D013146 ORTHO05D004092 2.0e-07 61.6 225 30.2
MBI17_g21975_MAGBIO Magnolia biondii HOM05D004189 ORTHO05D004092 3.4e-07 60.8 88 42.0
MD07G1268800 Malus domestica HOM05D004189 ORTHO05D004092 4.4e-07 60.5 226 32.7
RcHm_v2.0_Chr1g0377291 Rosa chinensis HOM05D013146 ORTHO05D004092 5.8e-07 60.1 363 26.4
Aqoxy7G00356 Aquilegia oxysepala HOM05D004189 ORTHO05D004092 7.5e-07 59.7 588 28.1
CDE08G1026 Ceratophyllum demersum HOM05D004189 ORTHO05D004092 1.3e-06 58.9 164 34.8
Nn1g01463 Nelumbo nucifera HOM05D004189 ORTHO05D004092 1.3e-06 58.9 414 28.7
ClCG09G012920 Citrullus lanatus HOM05D004189 ORTHO05D004092 2.2e-06 58.2 233 28.8
PSO339G0783 Papaver somniferum HOM05D006297 ORTHO05D007873 6.4e-06 56.6 167 29.3
Ah.07g207200 Amaranthus hybridus HOM05D032681 ORTHO05D004092 8.3e-06 56.2 221 27.6


User provided reference genes

Program Settings