Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 1.8e-128 462.6 241 100.0
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 2.7e-87 325.9 264 67.0
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 1.5e-66 256.9 265 59.2
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 9.0e-51 204.5 234 52.1
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 4.2e-48 195.7 266 48.9
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 7.1e-48 194.9 264 45.5
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 1.8e-46 190.3 267 47.2
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 4.5e-42 175.6 277 40.4
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 2.7e-39 166.4 283 44.5
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 1.3e-38 164.1 267 44.6
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 3.0e-38 162.9 283 44.9
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 3.0e-38 162.9 265 40.8
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 1.9e-37 160.2 272 41.9
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 3.3e-37 159.5 275 37.1
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 4.3e-37 159.1 272 41.2
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 5.7e-37 158.7 272 41.2
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 6.3e-36 155.2 289 41.5
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 6.3e-36 155.2 277 37.2
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 1.8e-35 153.7 273 38.1
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 4.1e-35 152.5 282 36.2
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 4.5e-34 149.1 254 37.8
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 7.7e-34 148.3 251 36.7
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 1.3e-33 147.5 280 35.0
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 6.5e-33 145.2 314 36.3
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 1.1e-32 144.4 278 39.9
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 1.4e-32 144.1 278 35.3
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 1.9e-32 143.7 274 39.8
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 1.6e-31 140.6 153 47.7
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 2.1e-31 140.2 228 42.5
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 2.7e-31 139.8 280 39.3
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 2.7e-31 139.8 276 36.6
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.6e-31 139.4 279 38.7
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 4.6e-31 139.0 279 36.6
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 6.1e-31 138.7 280 37.9
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 7.9e-31 138.3 274 39.1
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 1.8e-30 137.1 278 37.4
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 3.0e-30 136.3 273 38.8
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 3.0e-30 136.3 287 34.8
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 3.9e-30 136.0 275 38.9
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 5.1e-30 135.6 272 37.1
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 6.7e-30 135.2 282 37.6
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 1.1e-29 134.4 275 38.5
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 1.1e-29 134.4 276 36.6
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.1e-29 134.4 275 38.2
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 2.6e-29 133.3 271 38.4
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 2.6e-29 133.3 284 39.4
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 4.4e-29 132.5 267 39.7
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 5.7e-29 132.1 285 37.2
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 7.4e-29 131.7 279 37.6
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 1.3e-28 131.0 251 40.6
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 1.3e-28 131.0 266 39.5
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 1.7e-28 130.6 285 34.4
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 2.2e-28 130.2 281 35.6
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 2.8e-28 129.8 268 37.7
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 3.7e-28 129.4 279 37.6
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 6.3e-28 128.6 274 36.9
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 8.2e-28 128.3 272 37.9
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 1.1e-27 127.9 274 36.1
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 1.1e-27 127.9 249 38.6
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 1.4e-27 127.5 274 34.3
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 4.1e-27 125.9 275 33.8
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 5.3e-27 125.6 239 34.3
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 5.3e-27 125.6 111 67.6
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 9.1e-27 124.8 282 37.9
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 1.2e-26 124.4 296 37.2
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 2.0e-26 123.6 271 33.9
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 2.0e-26 123.6 271 39.1
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 1.0e-25 121.3 266 38.3
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 1.0e-25 121.3 266 37.6
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 2.2e-25 120.2 278 37.4
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 2.9e-25 119.8 286 38.1
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 2.9e-25 119.8 277 36.1
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 3.8e-25 119.4 273 38.8
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 8.5e-25 118.2 241 40.7
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 1.9e-24 117.1 103 66.0
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 3.2e-24 116.3 316 34.8
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 4.2e-24 115.9 97 69.1
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 4.2e-24 115.9 97 69.1
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 1.2e-23 114.4 97 68.0
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 1.2e-23 114.4 103 63.1
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 1.6e-23 114.0 276 35.5
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 3.6e-23 112.8 101 66.3
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 4.7e-23 112.5 150 54.0
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 4.7e-23 112.5 291 34.4
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 4.7e-23 112.5 103 67.0
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 6.1e-23 112.1 276 35.5
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 7.9e-23 111.7 291 33.7
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 1.0e-22 111.3 97 70.1
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 2.3e-22 110.2 149 43.6
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 1.5e-21 107.5 149 46.3
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 1.5e-21 107.5 155 45.2
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 7.4e-21 105.1 106 44.3
arahy.Tifrunner.gnm1.ann1.T7NAK5 Arachis hypogaea HOM05D015469 ORTHO05D009348 1.1e-19 101.3 82 58.5
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 2.0e-18 97.1 92 47.8
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 1.0e-17 94.7 278 35.3
CBR_g18775 Chara braunii HOM05D000368 ORTHO05D009348 2.2e-17 93.6 186 33.9
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 1.6e-15 87.4 240 34.2
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 3.6e-15 86.3 108 53.7
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 3.6e-15 86.3 156 38.5
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 6.1e-15 85.5 220 28.6
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 6.1e-15 85.5 97 56.7
arahy.Tifrunner.gnm1.ann1.QCHX4X Arachis hypogaea HOM05D000368 ORTHO05D009348 8.0e-15 85.1 136 41.9
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.0e-14 84.7 103 47.6
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.0e-14 84.7 103 48.5
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 1.8e-14 84.0 106 56.6
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 2.3e-14 83.6 247 28.3
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 6.7e-14 82.0 95 45.3
Peaxi162Scf00444g00851 Petunia axillaris HOM05D000368 ORTHO05D009348 1.5e-13 80.9 96 47.9
arahy.Tifrunner.gnm1.ann1.4PMG8D Arachis hypogaea HOM05D000368 ORTHO05D009348 1.4e-11 74.3 80 52.5
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 1.2e-10 71.2 100 53.0
COL.COLO4_29455 Corchorus olitorius HOM05D003229 ORTHO05D003835 2.9e-09 66.6 94 30.9
Lalb_Chr02g0141061 Lupinus albus HOM05D015469 ORTHO05D019215 6.5e-09 65.5 105 33.3
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 8.5e-09 65.1 190 28.4
Nitab4.5_0010116g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 3.2e-08 63.2 111 28.8
Duzib128G1455 Durio zibethinus HOM05D003229 ORTHO05D003835 4.2e-08 62.8 125 28.8
BcaC01g06184 Brassica carinata HOM05D000368 ORTHO05D000289 5.5e-08 62.4 72 47.2
Glyma.20G159000 Glycine max HOM05D015469 ORTHO05D019215 5.5e-08 62.4 90 38.9
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 7.2e-08 62.0 43 58.1
Glyma.10G235300 Glycine max HOM05D015469 ORTHO05D019215 1.2e-07 61.2 90 37.8
EL10Ac5g11782 Beta vulgaris HOM05D003229 ORTHO05D003835 1.6e-07 60.8 132 28.8
Dinv28434 Davidia involucrata HOM05D000368 ORTHO05D000289 2.7e-07 60.1 112 34.8
CAN.G10408.1 Capsicum annuum HOM05D003229 ORTHO05D003835 6.1e-07 58.9 69 40.6
Nitab4.5_0013078g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 8.0e-07 58.5 80 37.5
Nitab4.5_0002498g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 3.0e-06 56.6 93 30.1
Nitab4.5_0000875g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 5.2e-06 55.8 80 36.2


User provided reference genes

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