Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 8.8e-182 640.2 331 100.0
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 2.9e-156 555.4 326 87.7
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 7.0e-155 550.8 326 86.8
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 1.3e-153 546.6 326 86.5
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 7.8e-146 520.8 329 82.4
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 7.8e-146 520.8 324 84.0
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 1.1e-142 510.4 322 81.4
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 3.2e-139 498.8 323 78.9
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 4.6e-138 495.0 329 78.4
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 1.0e-137 493.8 324 78.7
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 2.4e-131 472.6 319 74.6
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 2.3e-129 466.1 321 73.5
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 3.3e-128 462.2 321 73.2
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 7.3e-128 461.1 329 75.4
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 4.8e-127 458.4 330 71.5
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 5.8e-125 451.4 324 70.4
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 1.9e-123 446.4 315 72.1
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 3.2e-123 445.7 336 68.5
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 3.5e-122 442.2 322 67.7
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 3.5e-122 442.2 327 68.8
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 7.9e-122 441.0 323 70.3
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.0e-121 440.7 323 70.3
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.3e-121 440.3 322 67.7
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.7e-121 439.9 323 70.6
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 3.0e-121 439.1 321 67.6
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.9e-121 438.7 323 69.3
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 3.9e-121 438.7 323 68.4
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 6.6e-121 438.0 323 70.0
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 6.6e-121 438.0 323 69.3
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 8.7e-121 437.6 326 67.8
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.3e-120 435.3 323 69.3
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 4.3e-120 435.3 325 68.3
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 7.4e-120 434.5 323 67.2
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 1.3e-119 433.7 329 68.4
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 1.6e-119 433.3 318 67.6
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 2.8e-119 432.6 324 66.7
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 2.8e-119 432.6 324 66.7
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 3.6e-119 432.2 323 66.9
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 3.6e-119 432.2 327 67.6
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 8.1e-119 431.0 328 67.1
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.1e-118 430.6 319 67.4
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 5.8e-117 424.9 321 66.0
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 9.9e-117 424.1 325 63.7
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 3.8e-116 422.2 322 65.8
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 4.9e-116 421.8 321 65.4
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 2.4e-115 419.5 325 64.6
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 2.4e-115 419.5 327 66.4
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 1.6e-114 416.8 322 63.7
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 1.6e-114 416.8 325 64.0
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 2.1e-114 416.4 321 63.6
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 2.1e-114 416.4 321 63.6
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 4.6e-114 415.2 321 65.7
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 6.0e-114 414.8 321 65.1
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 7.9e-114 414.5 321 64.8
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 1.0e-113 414.1 319 67.7
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 5.1e-113 411.8 304 68.8
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 6.7e-113 411.4 325 63.7
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 4.3e-112 408.7 322 63.0
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 9.6e-112 407.5 325 64.6
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 1.6e-111 406.8 327 63.9
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.1e-111 406.4 326 62.6
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 6.2e-111 404.8 326 64.4
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 1.4e-110 403.7 321 64.5
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 5.3e-110 401.7 320 64.7
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 6.9e-110 401.4 319 62.1
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 9.0e-110 401.0 320 63.8
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 3.4e-109 399.1 307 65.1
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.7e-108 396.7 304 66.1
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 1.7e-108 396.7 322 63.7
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 1.9e-107 393.3 322 62.1
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 3.5e-106 389.0 329 61.4
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 1.8e-105 386.7 326 60.4
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 1.5e-104 383.6 323 60.7
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 2.5e-104 382.9 320 61.6
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 2.5e-104 382.9 270 69.6
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 3.3e-104 382.5 296 63.9
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 4.3e-104 382.1 322 61.2
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 5.7e-104 381.7 327 61.5
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 2.8e-103 379.4 327 59.3
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 6.9e-102 374.8 325 58.8
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 2.0e-101 373.2 332 59.3
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 1.3e-100 370.5 322 59.3
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 2.7e-98 362.8 328 63.7
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 1.8e-97 360.1 329 58.7
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 3.3e-96 355.9 267 68.2
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 9.7e-96 354.4 333 55.9
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 1.5e-93 347.1 326 57.4
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 3.2e-91 339.3 245 68.2
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 3.1e-86 322.8 267 61.4
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 1.2e-82 310.8 322 55.9
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 1.4e-81 307.4 329 50.5
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 2.6e-77 293.1 318 48.7
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 2.9e-76 289.7 322 49.1
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 6.1e-74 282.0 331 48.9
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 5.2e-73 278.9 333 48.0
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 5.5e-67 258.8 320 44.1
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 6.1e-66 255.4 323 46.7
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 8.0e-66 255.0 234 59.8
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 7.5e-64 248.4 191 63.9
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 3.7e-63 246.1 205 62.0
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 1.2e-61 241.1 189 65.6
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 2.5e-59 233.4 164 72.0
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 1.5e-56 224.2 199 58.8
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 2.3e-44 183.7 254 42.9
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 7.0e-38 162.2 108 71.3
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.6e-37 161.0 108 70.4
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.7e-28 131.0 86 72.1
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 9.5e-27 125.2 269 28.6
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 8.4e-23 112.1 80 70.0
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 2.3e-20 104.0 122 47.5
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.7e-13 80.5 66 65.2
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 4.5e-08 63.2 91 48.4


User provided reference genes

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