Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10534_v3 Cicer arietinum L. HOM05D000179 ORTHO05D000107 2.3e-115 419.1 235 100.0
Medtr1g094115 Medicago truncatula HOM05D000179 ORTHO05D000107 6.9e-56 221.5 255 59.2
TPR.G9811 Trifolium pratense HOM05D000179 ORTHO05D000107 2.9e-38 162.9 233 52.8
Lalb_Chr02g0151961 Lupinus albus HOM05D000179 ORTHO05D000107 4.7e-36 155.6 305 42.3
Psat6g181320 Pisum sativum HOM05D000179 ORTHO05D000107 1.3e-33 147.5 257 47.9
VMungo1215G1467 Vigna mungo HOM05D000179 ORTHO05D000107 2.7e-31 139.8 296 40.5
Thecc.02G298700 Theobroma cacao HOM05D000179 ORTHO05D000107 5.5e-29 132.1 309 36.9
Phvul.003G008100 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 1.0e-27 127.9 274 43.4
Lalb_Chr17g0338071 Lupinus albus HOM05D000179 ORTHO05D000107 1.5e-26 124.0 268 41.0
Lalb_Chr10g0095201 Lupinus albus HOM05D000179 ORTHO05D000107 2.0e-26 123.6 279 39.4
Glyma.20G184000 Glycine max HOM05D000179 ORTHO05D000107 1.3e-25 120.9 308 37.7
MD13G1013000 Malus domestica HOM05D000179 ORTHO05D000107 1.7e-25 120.6 323 36.2
Lj2g0018233 Lotus japonicus HOM05D000179 ORTHO05D000107 1.1e-24 117.9 296 36.8
Potri.008G142500 Populus trichocarpa HOM05D000179 ORTHO05D000107 1.1e-24 117.9 257 37.7
Duzib251G0192 Durio zibethinus HOM05D000179 ORTHO05D000107 1.8e-24 117.1 311 40.2
Ca_25728_v3 Cicer arietinum L. HOM05D000179 ORTHO05D000107 3.1e-24 116.3 280 42.5
Glyma.07G158000 Glycine max HOM05D000179 ORTHO05D000107 3.1e-24 116.3 279 39.4
Glyma.20G005800 Glycine max HOM05D000179 ORTHO05D000107 3.1e-24 116.3 292 39.0
Potri.010G099100 Populus trichocarpa HOM05D000179 ORTHO05D000107 3.1e-24 116.3 261 37.2
QL03p041156 Quercus lobata HOM05D000179 ORTHO05D000107 5.4e-24 115.5 302 35.1
Gorai.005G158200 Gossypium raimondii HOM05D000179 ORTHO05D000107 1.2e-23 114.4 303 36.0
Gohir.D02G139000 Gossypium hirsutum HOM05D000179 ORTHO05D000107 2.0e-23 113.6 301 36.2
TWI74G1193 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 2.0e-23 113.6 283 37.1
VMungo0720G3005 Vigna mungo HOM05D000179 ORTHO05D000107 5.9e-23 112.1 261 37.2
Duzib248G1292 Durio zibethinus HOM05D000179 ORTHO05D000107 1.7e-22 110.5 328 33.8
Gohir.A03G116200 Gossypium hirsutum HOM05D000179 ORTHO05D000107 1.7e-22 110.5 265 38.5
Phvul.007G099800 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 5.0e-22 109.0 262 37.0
Duzib268G0575 Durio zibethinus HOM05D000179 ORTHO05D000107 6.6e-22 108.6 327 33.9
Lj5g0019938 Lotus japonicus HOM05D000179 ORTHO05D000107 6.6e-22 108.6 292 40.1
Sabra08G0107900 Salix brachista HOM05D000179 ORTHO05D000107 1.1e-21 107.8 256 36.7
Gohir.D12G156300 Gossypium hirsutum HOM05D000179 ORTHO05D000107 5.6e-21 105.5 297 35.4
Gorai.008G168900 Gossypium raimondii HOM05D000179 ORTHO05D000107 5.6e-21 105.5 297 35.4
Gohir.A12G152900 Gossypium hirsutum HOM05D000179 ORTHO05D000107 7.3e-21 105.1 297 35.4
Atru.chr11.1022 Acer truncatum HOM05D000179 ORTHO05D000107 1.2e-20 104.4 307 35.5
Sabra10G0071700 Salix brachista HOM05D000179 ORTHO05D000107 1.2e-20 104.4 261 35.6
Manes.17G092200 Manihot esculenta HOM05D000179 ORTHO05D000107 2.1e-20 103.6 303 34.3
Lj3A856T35 Lonicera japonica HOM05D000179 ORTHO05D000107 3.6e-20 102.8 272 35.7
Dinv10873 Davidia involucrata HOM05D000179 ORTHO05D000107 6.1e-20 102.1 277 35.7
Manes.15G141400 Manihot esculenta HOM05D000179 ORTHO05D000107 2.6e-18 96.7 284 34.5
Glyma.10G206600 Glycine max HOM05D000179 ORTHO05D000107 9.8e-18 94.7 299 32.4
Aqoxy3G04182 Aquilegia oxysepala HOM05D000179 ORTHO05D000107 1.3e-17 94.4 334 29.6
Cpa.g.sc2.89 Carica papaya HOM05D000179 ORTHO05D000107 2.2e-17 93.6 319 31.0
Oeu044058.1 Olea europaea HOM05D000179 ORTHO05D000107 3.7e-17 92.8 237 36.3
Oeu044057.1 Olea europaea HOM05D000179 ORTHO05D000107 4.9e-17 92.4 237 36.3
Haze_01591 Corylus avellana HOM05D000179 ORTHO05D000107 6.4e-17 92.0 151 46.4
Nn4g24783 Nelumbo nucifera HOM05D000179 ORTHO05D000107 6.4e-17 92.0 327 29.7
Prupe.1G341100 Prunus persica HOM05D000179 ORTHO05D000107 8.3e-17 91.7 325 34.8
Cfa015095 Carpinus fangiana HOM05D000179 ORTHO05D000107 1.4e-16 90.9 246 42.3
DCAR_030324 Daucus carota HOM05D000179 ORTHO05D000107 7.0e-16 88.6 293 35.2
CSS0018845 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 9.2e-16 88.2 299 32.4
CSS0050143 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 9.2e-16 88.2 299 32.4
FAN07G0120 Fragaria x ananassa HOM05D000179 ORTHO05D000107 9.2e-16 88.2 321 35.5
Oeu001138.1 Olea europaea HOM05D000179 ORTHO05D000107 9.2e-16 88.2 244 35.7
Oeu001139.1 Olea europaea HOM05D000179 ORTHO05D000107 9.2e-16 88.2 244 35.7
Oeu001140.1 Olea europaea HOM05D000179 ORTHO05D000107 9.2e-16 88.2 244 35.7
GSVIVG01010284001 Vitis vinifera HOM05D000179 ORTHO05D000107 1.2e-15 87.8 225 44.4
CDE07G1266 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 2.0e-15 87.0 309 31.1
FAN17G2110 Fragaria x ananassa HOM05D000179 ORTHO05D000107 2.0e-15 87.0 329 36.5
MBI08_g40158_MAGBIO Magnolia biondii HOM05D000179 ORTHO05D000107 2.0e-15 87.0 331 31.7
TAR629G1590 Trochodendron aralioides HOM05D000179 ORTHO05D000107 3.5e-15 86.3 330 30.3
RcHm_v2.0_Chr4g0445671 Rosa chinensis HOM05D000179 ORTHO05D000107 4.6e-15 85.9 332 35.5
CiPaw.05G164600 Carya illinoinensis HOM05D000179 ORTHO05D000107 7.8e-15 85.1 298 33.2
DCAR_026844 Daucus carota HOM05D000179 ORTHO05D000107 7.8e-15 85.1 247 34.8
vmacro10770 Vaccinium macrocarpon HOM05D000179 ORTHO05D000107 1.0e-14 84.7 274 35.0
CDE04G2903 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 1.3e-14 84.3 307 31.3
Manes.17G092100 Manihot esculenta HOM05D000179 ORTHO05D000107 1.3e-14 84.3 316 33.2
Gohir.D12G156400 Gossypium hirsutum HOM05D000179 ORTHO05D000107 2.3e-14 83.6 227 37.9
Rhsim09G0079200 Rhododendron simsii HOM05D000179 ORTHO05D000107 5.0e-14 82.4 234 36.8
DCAR_002635 Daucus carota HOM05D000179 ORTHO05D000107 8.6e-14 81.6 264 35.2
Gorai.008G169000 Gossypium raimondii HOM05D000179 ORTHO05D000107 8.6e-14 81.6 208 38.0
Manes.15G141300 Manihot esculenta HOM05D000179 ORTHO05D000107 2.5e-13 80.1 267 34.8
FAN22G1496 Fragaria x ananassa HOM05D000179 ORTHO05D000107 3.3e-13 79.7 331 34.7
Gohir.A12G153000 Gossypium hirsutum HOM05D000179 ORTHO05D000107 3.3e-13 79.7 213 37.6
AL5G11310 Arabidopsis lyrata HOM05D000179 ORTHO05D000107 4.3e-13 79.3 250 35.2
Duzib268G1325 Durio zibethinus HOM05D000179 ORTHO05D000107 4.3e-13 79.3 302 29.8
Atru.chr11.1023 Acer truncatum HOM05D000179 ORTHO05D000107 1.2e-12 77.8 292 30.1
Hma1.2p1_0131F.1_g060620 Hydrangea macrophylla HOM05D000179 ORTHO05D000107 1.2e-12 77.8 282 32.6
AT2G02080 Arabidopsis thaliana HOM05D000179 ORTHO05D000107 1.6e-12 77.4 188 37.8
Eucgr.B02626 Eucalyptus grandis HOM05D000179 ORTHO05D000107 2.8e-12 76.6 308 31.8
FvH4_4g36050 Fragaria vesca HOM05D000179 ORTHO05D000107 2.8e-12 76.6 331 35.3
CDE04G3196 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 6.2e-12 75.5 290 31.4
Dinv08463 Davidia involucrata HOM05D000179 ORTHO05D000107 8.0e-12 75.1 148 41.9
THA.LOC104805117 Tarenaya hassleriana HOM05D000179 ORTHO05D000107 8.0e-12 75.1 234 35.0
Phvul.007G020900 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 1.0e-11 74.7 246 32.1
Carub.0005s0111 Capsella rubella HOM05D000179 ORTHO05D000107 2.3e-11 73.6 251 32.7
FAN12G3463 Fragaria x ananassa HOM05D000179 ORTHO05D000107 3.1e-11 73.2 331 33.5
Dinv03379 Davidia involucrata HOM05D000179 ORTHO05D000107 4.0e-11 72.8 300 30.3
CiPaw.05G164500 Carya illinoinensis HOM05D000179 ORTHO05D000107 5.2e-11 72.4 200 38.5
Peaxi162Scf00025g00051 Petunia axillaris HOM05D000179 ORTHO05D000107 5.2e-11 72.4 257 32.7
Thhalv10004022m.g Eutrema salsugineum HOM05D000179 ORTHO05D000107 8.9e-11 71.6 243 33.3
CAN.G458.9 Capsicum annuum HOM05D000179 ORTHO05D000107 1.2e-10 71.2 258 34.5
MBI06_g13410_MAGBIO Magnolia biondii HOM05D000179 ORTHO05D000107 1.2e-10 71.2 329 29.8
CDE02G0975 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 2.0e-10 70.5 290 32.1
Sabra08G0107800 Salix brachista HOM05D000179 ORTHO05D000107 3.4e-10 69.7 247 32.4
TAR371G1178 Trochodendron aralioides HOM05D000179 ORTHO05D000107 3.4e-10 69.7 299 29.4
COL.COLO4_27535 Corchorus olitorius HOM05D000179 ORTHO05D000107 5.8e-10 68.9 131 35.1
Lj6A726T39 Lonicera japonica HOM05D000179 ORTHO05D000107 5.8e-10 68.9 237 36.7
Actinidia37473 Actinidia chinensis HOM05D000179 ORTHO05D000107 9.8e-10 68.2 268 34.7
arahy.Tifrunner.gnm1.ann1.QV2KCV Arachis hypogaea HOM05D000179 ORTHO05D000107 1.3e-09 67.8 297 33.3
arahy.Tifrunner.gnm1.ann1.72FWH3 Arachis hypogaea HOM05D000179 ORTHO05D000107 1.7e-09 67.4 293 32.8
TAR374G0116 Trochodendron aralioides HOM05D000179 ORTHO05D000107 1.7e-09 67.4 326 31.0
PSO782G0494 Papaver somniferum HOM05D000179 ORTHO05D000107 2.9e-09 66.6 333 30.6
Cpa.g.sc2.88 Carica papaya HOM05D000179 ORTHO05D000107 3.7e-09 66.2 271 33.2
HPP92_005104 Vanilla planifolia HOM05D000179 ORTHO05D000107 6.4e-09 65.5 286 28.7
Potri.008G142400 Populus trichocarpa HOM05D000179 ORTHO05D000107 8.3e-09 65.1 326 29.1
Lalb_Chr17g0338081 Lupinus albus HOM05D000179 ORTHO05D000107 1.4e-08 64.3 250 34.4
BcaB07g30713 Brassica carinata HOM05D000179 ORTHO05D000107 1.9e-08 63.9 246 33.7
BcaB07g30714 Brassica carinata HOM05D000179 ORTHO05D000107 1.9e-08 63.9 246 33.7
BcaC06g31250 Brassica carinata HOM05D000179 ORTHO05D000107 1.9e-08 63.9 237 31.2
BraA09t37980Z Brassica rapa HOM05D000179 ORTHO05D000107 1.9e-08 63.9 250 33.6
CARHR288910 Cardamine hirsuta HOM05D000179 ORTHO05D000107 2.4e-08 63.5 238 34.0
Sp2g13500 Schrenkiella parvula HOM05D000179 ORTHO05D000107 2.4e-08 63.5 254 32.7
Psat6g097680 Pisum sativum HOM05D000179 ORTHO05D000107 3.2e-08 63.2 259 30.5
TPR.G11174 Trifolium pratense HOM05D000179 ORTHO05D000107 4.1e-08 62.8 257 28.8
A09p23780 Brassica napus HOM05D000179 ORTHO05D000107 7.0e-08 62.0 250 33.2
SHI04259 Sapria himalayana HOM05D000179 ORTHO05D000107 7.0e-08 62.0 158 39.2
Actinidia12417 Actinidia chinensis HOM05D000179 ORTHO05D000107 1.6e-07 60.8 274 31.4
EL10Ac6g15399 Beta vulgaris HOM05D000179 ORTHO05D000107 2.7e-07 60.1 158 39.2
DCAR_023527 Daucus carota HOM05D000179 ORTHO05D000107 2.7e-07 60.1 292 30.8
Duzib248G1497 Durio zibethinus HOM05D000179 ORTHO05D000107 2.7e-07 60.1 303 29.4
Duzib251G0818 Durio zibethinus HOM05D000179 ORTHO05D000107 2.7e-07 60.1 262 32.1
Medtr1g112270 Medicago truncatula HOM05D000179 ORTHO05D000107 2.7e-07 60.1 202 34.2
Sopen04g003650 Solanum pennellii HOM05D000179 ORTHO05D000107 3.5e-07 59.7 249 37.3
TWI77G0459 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 4.6e-07 59.3 293 28.3
BcaC06g34080 Brassica carinata HOM05D000179 ORTHO05D000107 6.0e-07 58.9 239 29.7
BolC7t43806H Brassica oleracea HOM05D000179 ORTHO05D000107 6.0e-07 58.9 239 29.7
Dinv10875 Davidia involucrata HOM05D000179 ORTHO05D000107 6.0e-07 58.9 310 27.7
Aa31LG2G7860 Aethionema arabicum HOM05D000179 ORTHO05D000107 7.8e-07 58.5 159 34.6
C07p32910 Brassica napus HOM05D000179 ORTHO05D000107 7.8e-07 58.5 239 29.7
C09p30640 Brassica napus HOM05D000179 ORTHO05D000107 1.0e-06 58.2 211 35.1
BolC9t55927H Brassica oleracea HOM05D000179 ORTHO05D000107 1.0e-06 58.2 211 35.1
CiPaw.06G056900 Carya illinoinensis HOM05D000179 ORTHO05D000107 1.3e-06 57.8 279 29.0
VMungo0720G1853 Vigna mungo HOM05D000179 ORTHO05D000107 1.3e-06 57.8 259 30.9
A06p43810 Brassica napus HOM05D000179 ORTHO05D000107 1.7e-06 57.4 229 30.6
BraA06t27259Z Brassica rapa HOM05D000179 ORTHO05D000107 1.7e-06 57.4 229 30.6
FAN22G0697 Fragaria x ananassa HOM05D000179 ORTHO05D000107 2.3e-06 57.0 104 45.2
BcaB07g30356 Brassica carinata HOM05D000179 ORTHO05D000107 3.0e-06 56.6 167 37.1
Lj3C856G6 Lonicera japonica HOM05D000179 ORTHO05D000107 3.0e-06 56.6 166 38.0
Thecc.02G298800 Theobroma cacao HOM05D000179 ORTHO05D000107 3.0e-06 56.6 305 28.2
BcaC04g21533 Brassica carinata HOM05D000179 ORTHO05D000107 3.9e-06 56.2 217 35.0
Cc11_g03360 Coffea canephora HOM05D000179 ORTHO05D000107 3.9e-06 56.2 232 32.3
Ciclev10004533m.g Citrus clementina HOM05D000179 ORTHO05D000107 5.0e-06 55.8 228 30.7
Gohir.D01G136800 Gossypium hirsutum HOM05D000179 ORTHO05D000107 5.0e-06 55.8 245 29.4
Gorai.002G169100 Gossypium raimondii HOM05D000179 ORTHO05D000107 5.0e-06 55.8 245 29.4
PSO063G6427 Papaver somniferum HOM05D000179 ORTHO05D000107 5.0e-06 55.8 204 37.7
arahy.Tifrunner.gnm1.ann1.5VME1B Arachis hypogaea HOM05D000179 ORTHO05D000107 8.6e-06 55.1 69 47.8
arahy.Tifrunner.gnm1.ann1.6KXL6V Arachis hypogaea HOM05D000179 ORTHO05D000107 8.6e-06 55.1 69 47.8
Glyma.10G280000 Glycine max HOM05D000179 ORTHO05D000107 8.6e-06 55.1 284 30.3


User provided reference genes

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