Gene: AT2G02080

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G02080
  • Transcript Identifier AT2G02080.1
  • Gene Type Coding gene
  • Location Chr2 : 518328-521170 : negative

Gene Family Information

  • ID HOM05D000179
  • #Genes/#Species 2119/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G02080.1
  • symbol IDD4
  • Alias AtIDD4,indeterminate(ID)-domain 4
  • uniprot Q8GYC1

Descriptions

  • Description indeterminate(ID)-domain 4
  • Computational description indeterminate(ID)-domain 4 (IDD4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G14580.2); Has 51298 Blast hits to 20221 proteins in 333 species: Archae - 2; Bacteria - 165; Metazoa - 48118; Fungi - 358; Plants - 855; Viruses - 7; Other Eukaryotes - 1793 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008356
IMP
Gene Ontologyasymmetric cell division1
GO:0048364
IMP
Gene Ontologyroot development1
GO:0045893
IDA
Gene Ontologypositive regulation of transcription, DNA-templated2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003700
IDA, IMP
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 2 3 4
GO:0043565
IDA
Gene Ontologysequence-specific DNA binding2
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IEA
GOA Databaseplastid
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus2 4
GO:0009507
IEA
GOA Databasechloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR022755 Zinc finger, double-stranded RNA binding
IPR013087 Zinc finger C2H2-type
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)