Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_10154_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 8.4e-147 524.2 392 100.0
Ca_29832_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 8.4e-147 524.2 392 100.0
Psat6g151720 Pisum sativum HOM05D005421 ORTHO05D007601 1.7e-139 500.0 393 96.4
Glyma.20G238500 Glycine max HOM05D005421 ORTHO05D007601 8.7e-136 487.6 390 91.5
Glyma.10G149900 Glycine max HOM05D005421 ORTHO05D007601 4.8e-134 481.9 390 90.3
Lj5g0011296 Lotus japonicus HOM05D005421 ORTHO05D007601 9.3e-130 467.6 391 92.8
Phvul.007G199400 Phaseolus vulgaris HOM05D005421 ORTHO05D007601 4.6e-129 465.3 391 88.2
Lalb_Chr02g0148011 Lupinus albus HOM05D005421 ORTHO05D007601 9.9e-124 447.6 396 86.4
Medtr1g083720 Medicago truncatula HOM05D005421 ORTHO05D007601 5.1e-120 435.3 393 89.6
Lalb_Chr21g0310441 Lupinus albus HOM05D005421 ORTHO05D007601 9.6e-119 431.0 393 86.8
TAR636G1951 Trochodendron aralioides HOM05D005421 ORTHO05D007601 1.6e-118 430.3 394 84.5
QL03p018920 Quercus lobata HOM05D005421 ORTHO05D007601 2.8e-118 429.5 402 86.1
VMungo0720G1843 Vigna mungo HOM05D005421 ORTHO05D007601 6.9e-117 424.9 395 85.8
Actinidia35540 Actinidia chinensis HOM05D005421 ORTHO05D007601 2.0e-116 423.3 390 83.8
CSS0007056 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 2.6e-116 422.9 390 82.8
CSS0046729 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 2.6e-116 422.9 390 82.6
CiPaw.07G025400 Carya illinoinensis HOM05D005421 ORTHO05D007601 4.5e-116 422.2 404 83.9
FvH4_6g07010 Fragaria vesca HOM05D005421 ORTHO05D007601 6.5e-115 418.3 392 83.7
RcHm_v2.0_Chr3g0456541 Rosa chinensis HOM05D005421 ORTHO05D007601 2.5e-114 416.4 392 84.2
CANSAT54G2596 Cannabis sativa HOM05D005421 ORTHO05D007601 9.3e-114 414.5 397 86.9
FAN14G1909 Fragaria x ananassa HOM05D005421 ORTHO05D007601 2.7e-113 412.9 392 82.4
MBI18_g04564_MAGBIO Magnolia biondii HOM05D005421 ORTHO05D007601 6.7e-112 408.3 393 81.7
MELO3C004206.2 Cucumis melo HOM05D005421 ORTHO05D007601 1.1e-111 407.5 399 83.2
Prupe.1G236900 Prunus persica HOM05D005421 ORTHO05D007601 1.5e-111 407.1 395 80.0
CsaV3_2G006840 Cucumis sativus L. HOM05D005421 ORTHO05D007601 7.4e-111 404.8 409 81.4
PSO170G1114 Papaver somniferum HOM05D005421 ORTHO05D007601 3.7e-110 402.5 392 83.2
Eucgr.H03270 Eucalyptus grandis HOM05D005421 ORTHO05D007601 1.4e-109 400.6 396 81.1
FAN05G0688 Fragaria x ananassa HOM05D005421 ORTHO05D007601 1.4e-109 400.6 423 72.1
ClCG02G015170 Citrullus lanatus HOM05D005421 ORTHO05D007601 2.4e-109 399.8 405 82.0
Solyc01g100060.4 Solanum lycopersicum HOM05D005421 ORTHO05D007601 2.0e-108 396.7 392 82.1
Manes.13G000084 Manihot esculenta HOM05D005421 ORTHO05D007601 5.9e-108 395.2 390 83.6
PGR031G1007 Punica granatum HOM05D005421 ORTHO05D007601 5.9e-108 395.2 402 82.3
FAN02G3486 Fragaria x ananassa HOM05D005421 ORTHO05D007601 7.6e-108 394.8 409 77.8
GSVIVG01031188001 Vitis vinifera HOM05D005421 ORTHO05D007601 1.3e-107 394.0 222 89.2
MD12G1209800 Malus domestica HOM05D005421 ORTHO05D007601 1.7e-107 393.7 390 82.6
Nitab4.5_0002612g0040 Nicotiana tabacum HOM05D005421 ORTHO05D007601 2.2e-107 393.3 392 82.7
Gohir.D10G110800 Gossypium hirsutum HOM05D005421 ORTHO05D007601 2.9e-107 392.9 395 75.9
Gorai.011G122100 Gossypium raimondii HOM05D005421 ORTHO05D007601 2.9e-107 392.9 395 75.9
Nitab4.5_0001971g0070 Nicotiana tabacum HOM05D005421 ORTHO05D007601 3.8e-107 392.5 392 81.9
Cfa006671 Carpinus fangiana HOM05D005421 ORTHO05D007601 1.1e-106 391.0 222 87.4
MD04G1196900 Malus domestica HOM05D005421 ORTHO05D007601 1.1e-106 391.0 390 78.5
Sopen01g043590 Solanum pennellii HOM05D005421 ORTHO05D007601 1.9e-106 390.2 399 79.4
Thecc.06G040900 Theobroma cacao HOM05D005421 ORTHO05D007601 2.5e-106 389.8 400 79.5
Duzib150G0691 Durio zibethinus HOM05D005421 ORTHO05D007601 3.2e-106 389.4 394 81.7
Atru.chr2.115 Acer truncatum HOM05D005421 ORTHO05D007601 7.2e-106 388.3 396 82.6
CAN.G1273.26 Capsicum annuum HOM05D005421 ORTHO05D007601 1.2e-105 387.5 396 81.1
Cpa.g.sc48.125 Carica papaya HOM05D005421 ORTHO05D007601 1.2e-105 387.5 413 80.9
PSO407G0035 Papaver somniferum HOM05D005421 ORTHO05D007601 3.6e-105 386.0 222 84.7
Sed0018701 Sechium edule HOM05D005421 ORTHO05D007601 4.6e-105 385.6 407 77.4
Gohir.A10G155100 Gossypium hirsutum HOM05D005421 ORTHO05D007601 6.1e-105 385.2 398 75.4
Aqoxy2G02863 Aquilegia oxysepala HOM05D005421 ORTHO05D007601 1.0e-104 384.4 222 85.6
Haze_04100 Corylus avellana HOM05D005421 ORTHO05D007601 3.0e-104 382.9 497 63.2
Dinv30846 Davidia involucrata HOM05D005421 ORTHO05D007601 6.7e-104 381.7 221 86.9
Sabra13G0010600 Salix brachista HOM05D005421 ORTHO05D007601 8.7e-104 381.3 390 79.0
SalBow1G5723 Salvia bowleyana HOM05D005421 ORTHO05D007601 8.7e-104 381.3 392 79.8
Peaxi162Scf00037g01816 Petunia axillaris HOM05D005421 ORTHO05D007601 1.5e-103 380.6 390 80.0
Rhsim11G0092200 Rhododendron simsii HOM05D005421 ORTHO05D007601 1.5e-103 380.6 439 75.6
SGA_v2.0_scaffold4G01947 Striga asiatica HOM05D005421 ORTHO05D007601 1.5e-103 380.6 390 72.6
Potri.013G012000 Populus trichocarpa HOM05D005421 ORTHO05D007601 2.5e-103 379.8 390 77.9
CDE02G0330 Ceratophyllum demersum HOM05D005421 ORTHO05D007601 3.3e-103 379.4 222 84.2
Cc02_g34540 Coffea canephora HOM05D005421 ORTHO05D007601 3.3e-103 379.4 222 86.0
DCAR_004503 Daucus carota HOM05D005421 ORTHO05D007601 4.3e-103 379.0 398 79.9
Lsat_1_v5_gn_7_73220 Lactuca sativa HOM05D005421 ORTHO05D007601 4.8e-102 375.6 222 84.7
Ciclev10001489m.g Citrus clementina HOM05D005421 ORTHO05D007601 6.3e-102 375.2 392 81.4
TWI12G1149 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 1.1e-101 374.4 222 80.6
arahy.Tifrunner.gnm1.ann1.1MC3I0 Arachis hypogaea HOM05D005421 ORTHO05D007601 1.4e-101 374.0 487 66.1
PGSC0003DMG400024728 Solanum tuberosum HOM05D005421 ORTHO05D007601 6.9e-101 371.7 393 78.4
TWI56G0052 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 5.9e-100 368.6 240 77.1
Migut.B01005 Erythranthe guttata HOM05D005421 ORTHO05D007601 1.0e-99 367.9 224 83.5
HanXRQChr01g0011821 Helianthus annuus HOM05D005421 ORTHO05D007601 1.7e-99 367.1 392 80.1
vmacro01533 Vaccinium macrocarpon HOM05D005421 ORTHO05D007601 1.7e-99 367.1 442 74.0
HPP92_020212 Vanilla planifolia HOM05D005421 ORTHO05D007601 8.5e-99 364.8 216 86.1
HPP92_020232 Vanilla planifolia HOM05D005421 ORTHO05D007601 8.5e-99 364.8 216 86.1
Oeu045895.1 Olea europaea HOM05D005421 ORTHO05D007601 2.5e-98 363.2 410 63.4
ECA236G4663 Erigeron canadensis HOM05D005421 ORTHO05D007601 4.2e-98 362.5 222 81.5
Dinv24409 Davidia involucrata HOM05D005421 ORTHO05D007601 5.5e-98 362.1 390 80.5
THA.LOC104805907 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 9.4e-98 361.3 392 80.9
Hund07118 Selenicereus undatus HOM05D005421 ORTHO05D007601 2.1e-97 360.1 189 89.9
THA.LOC104820733 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 2.1e-97 360.1 222 82.4
BcaB01g03524 Brassica carinata HOM05D005421 ORTHO05D007601 2.7e-97 359.8 219 82.6
BcaC01g05387 Brassica carinata HOM05D005421 ORTHO05D007601 6.1e-97 358.6 221 81.4
C03p27110 Brassica napus HOM05D005421 ORTHO05D007601 6.1e-97 358.6 221 81.4
BolC3t15092H Brassica oleracea HOM05D005421 ORTHO05D007601 6.1e-97 358.6 221 81.4
arahy.Tifrunner.gnm1.ann1.MB2RBZ Arachis hypogaea HOM05D005421 ORTHO05D007601 2.3e-96 356.7 529 60.7
Sc16g0008670 Simmondsia chinensis HOM05D005421 ORTHO05D007601 8.8e-96 354.8 189 87.3
AUR62005243 Chenopodium quinoa HOM05D005421 ORTHO05D007601 1.1e-95 354.4 189 87.3
Sp4g22980 Schrenkiella parvula HOM05D005421 ORTHO05D007601 1.5e-95 354.0 189 86.2
Ah.04g161240 Amaranthus hybridus HOM05D005421 ORTHO05D007601 2.6e-95 353.2 189 86.2
Aa31LG3G1470 Aethionema arabicum HOM05D005421 ORTHO05D007601 5.7e-95 352.1 222 80.2
EL10Ac4g09870 Beta vulgaris HOM05D005421 ORTHO05D007601 7.4e-95 351.7 395 78.2
CARHR135760 Cardamine hirsuta HOM05D005421 ORTHO05D007601 1.7e-94 350.5 189 85.2
AL4G38520 Arabidopsis lyrata HOM05D005421 ORTHO05D007601 2.8e-94 349.7 189 85.2
AT2G40650 Arabidopsis thaliana HOM05D005421 ORTHO05D007601 6.3e-94 348.6 189 84.7
BraA03t11510Z Brassica rapa HOM05D005421 ORTHO05D007601 6.3e-94 348.6 189 84.7
Carub.0004s2294 Capsella rubella HOM05D005421 ORTHO05D007601 1.1e-93 347.8 189 84.7
Mapoly0138s0022 Marchantia polymorpha HOM05D005421 ORTHO05D007601 1.1e-93 347.8 189 85.7
COL.COLO4_26689 Corchorus olitorius HOM05D005421 ORTHO05D007601 2.0e-92 343.6 403 52.1
Pp3c1_35390 Physcomitrium patens HOM05D005421 ORTHO05D007601 2.0e-92 343.6 222 78.4
Zm00001eb095730 Zea mays HOM05D005421 ORTHO05D007601 5.9e-92 342.0 189 83.1
BcaC02g07328 Brassica carinata HOM05D005421 ORTHO05D007601 7.7e-92 341.7 189 84.1
A04p31080 Brassica napus HOM05D005421 ORTHO05D007601 2.2e-91 340.1 189 83.6
Nitab4.5_0003248g0020 Nicotiana tabacum HOM05D005421 ORTHO05D007601 3.8e-91 339.3 214 77.6
Os09g0103600 Oryza sativa ssp. japonica HOM05D005421 ORTHO05D007601 1.1e-90 337.8 189 82.0
AagrBONN_evm.TU.Sc2ySwM_117.208 Anthoceros agrestis HOM05D005421 ORTHO05D007601 1.4e-90 337.4 189 83.1
A03p22860 Brassica napus HOM05D005421 ORTHO05D007601 5.5e-90 335.5 212 75.5
C04p68470 Brassica napus HOM05D005421 ORTHO05D007601 9.4e-90 334.7 196 81.1
CBR_g27792 Chara braunii HOM05D005421 ORTHO05D007601 3.6e-89 332.8 189 83.6
BraA04t18563Z Brassica rapa HOM05D005421 ORTHO05D007601 1.1e-87 327.8 210 75.2
BolC4t28347H Brassica oleracea HOM05D005421 ORTHO05D007601 1.5e-87 327.4 218 72.9
COL.COLO4_07356 Corchorus olitorius HOM05D005421 ORTHO05D007601 3.3e-87 326.2 394 54.1
BcaB06g29166 Brassica carinata HOM05D005421 ORTHO05D007601 2.8e-86 323.2 189 79.9
SMO361G0640 Selaginella moellendorffii HOM05D005421 ORTHO05D007601 1.8e-85 320.5 189 78.8
FAN09G4258 Fragaria x ananassa HOM05D000389 ORTHO05D000287 3.1e-85 319.7 387 68.0
TWI38G1969 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 7.0e-85 318.5 404 50.0
AUR62000721 Chenopodium quinoa HOM05D005421 ORTHO05D007601 2.0e-84 317.0 167 88.6
Nn4g25707 Nelumbo nucifera HOM05D005421 ORTHO05D007601 1.3e-83 314.3 222 77.0
Cre12.g503400 Chlamydomonas reinhardtii HOM05D005421 ORTHO05D007601 5.7e-71 272.3 189 63.5
Peaxi162Scf00404g00814 Petunia axillaris HOM05D005421 ORTHO05D007601 3.8e-67 259.6 388 44.3
MCO01G394 Micromonas commoda HOM05D005421 ORTHO05D007601 6.8e-56 222.2 185 54.6
Haze_27467 Corylus avellana HOM05D005421 ORTHO05D007601 1.1e-53 214.9 184 55.4
Potri.005G021600 Populus trichocarpa HOM05D005421 ORTHO05D007601 1.0e-51 208.4 337 65.0
PRCOL_00004539 Prasinoderma coloniale HOM05D005421 ORTHO05D007601 1.0e-51 208.4 192 53.6
Lj9C202T10 Lonicera japonica HOM05D005421 ORTHO05D007601 2.6e-47 193.7 97 91.8
Prupe.6G317400 Prunus persica HOM05D005421 ORTHO05D007601 9.8e-47 191.8 302 67.5
Lj9A202T65 Lonicera japonica HOM05D005421 ORTHO05D007601 1.7e-43 181.0 126 76.2
SEGI_13779 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 3.3e-42 176.8 94 86.2
TAR362G1077 Trochodendron aralioides HOM05D005421 ORTHO05D026565 7.3e-26 122.5 85 80.0
SEGI_07889 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 8.1e-25 119.0 143 49.0
ATR0469G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 5.2e-24 116.3 70 78.6
ATR1164G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 5.2e-24 116.3 70 78.6
Lj3g0025046 Lotus japonicus HOM05D005421 ORTHO05D026565 1.8e-16 91.3 60 73.3
BcaB06g27834 Brassica carinata HOM05D005421 ORTHO05D031867 7.1e-13 79.3 68 61.8
RcHm_v2.0_Chr7g0209371 Rosa chinensis HOM05D005421 ORTHO05D007601 9.3e-13 79.0 53 60.4
Dinv05263 Davidia involucrata HOM05D002902 ORTHO05D008934 1.1e-10 72.0 42 81.0
ATR0693G087 Amborella trichopoda HOM05D005421 ORTHO05D026565 2.6e-07 60.8 55 72.7
Oeu029357.1 Olea europaea HOM05D005421 ORTHO05D026565 3.4e-07 60.5 53 62.3
ATR0693G223 Amborella trichopoda HOM05D005421 ORTHO05D031077 1.3e-06 58.5 28 96.4
BcaB06g29163 Brassica carinata HOM05D005421 ORTHO05D031077 4.9e-06 56.6 26 96.2


User provided reference genes

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