Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09678_v3 Cicer arietinum L. HOM05D003989 ORTHO05D004626 2.1e-117 425.6 206 100.0
TPR.G23970 Trifolium pratense HOM05D003989 ORTHO05D004626 1.3e-103 379.8 206 88.3
Psat6g041800 Pisum sativum HOM05D003989 ORTHO05D004626 3.9e-103 378.3 206 87.9
Medtr1g069900 Medicago truncatula HOM05D003989 ORTHO05D004626 4.9e-98 361.3 206 84.5
arahy.Tifrunner.gnm1.ann1.CXB6W4 Arachis hypogaea HOM05D003989 ORTHO05D004626 3.2e-89 332.0 207 74.4
Medtr1g069870 Medicago truncatula HOM05D003989 ORTHO05D004626 2.7e-88 328.9 206 78.6
Lj5g0003366 Lotus japonicus HOM05D003989 ORTHO05D004626 8.7e-87 323.9 206 74.3
Glyma.12G060500 Glycine max HOM05D003989 ORTHO05D004626 2.5e-86 322.4 206 73.3
Hma1.2p1_0273F.1_g109620 Hydrangea macrophylla HOM05D003989 ORTHO05D004626 3.7e-85 318.5 206 71.4
Nitab4.5_0000470g0010 Nicotiana tabacum HOM05D003989 ORTHO05D004626 3.7e-85 318.5 206 72.8
Phvul.007G192500 Phaseolus vulgaris HOM05D003989 ORTHO05D004626 8.2e-85 317.4 206 73.3
Rhsim01G0262900 Rhododendron simsii HOM05D003989 ORTHO05D004626 9.0e-84 313.9 206 70.4
vmacro02667 Vaccinium macrocarpon HOM05D003989 ORTHO05D004626 2.0e-83 312.8 206 71.8
Atru.chr5.1704 Acer truncatum HOM05D003989 ORTHO05D004626 2.6e-83 312.4 206 71.8
Oeu063312.1 Olea europaea HOM05D003989 ORTHO05D004626 7.6e-83 310.8 206 71.4
Dinv22401 Davidia involucrata HOM05D003989 ORTHO05D004626 1.3e-82 310.1 206 70.9
Potri.005G225100 Populus trichocarpa HOM05D003989 ORTHO05D004626 1.7e-82 309.7 206 68.9
Actinidia07300 Actinidia chinensis HOM05D003989 ORTHO05D004626 2.2e-82 309.3 206 69.9
Nn1g02783 Nelumbo nucifera HOM05D003989 ORTHO05D004626 3.8e-82 308.5 212 69.3
Hund02930 Selenicereus undatus HOM05D003989 ORTHO05D004626 3.8e-82 308.5 206 68.4
EL10As5g23494 Beta vulgaris HOM05D003989 ORTHO05D004626 4.9e-82 308.1 206 67.5
FvH4_2g21360 Fragaria vesca HOM05D003989 ORTHO05D004626 4.9e-82 308.1 206 69.4
Sabra05G0173700 Salix brachista HOM05D003989 ORTHO05D004626 4.9e-82 308.1 206 68.0
RcHm_v2.0_Chr6g0287951 Rosa chinensis HOM05D003989 ORTHO05D004626 6.5e-82 307.8 206 68.9
Sed0015900 Sechium edule HOM05D003989 ORTHO05D004626 8.4e-82 307.4 206 66.0
Thecc.01G257400 Theobroma cacao HOM05D003989 ORTHO05D004626 8.4e-82 307.4 206 69.4
HanXRQChr04g0115141 Helianthus annuus HOM05D003989 ORTHO05D004626 1.9e-81 306.2 206 70.4
DCAR_012550 Daucus carota HOM05D003989 ORTHO05D004626 2.5e-81 305.8 206 67.5
Lalb_Chr06g0170491 Lupinus albus HOM05D003989 ORTHO05D004626 4.2e-81 305.1 204 70.1
MD10G1183600 Malus domestica HOM05D003989 ORTHO05D004626 4.2e-81 305.1 206 68.9
Sc05g0000580 Simmondsia chinensis HOM05D003989 ORTHO05D004626 4.2e-81 305.1 206 67.5
Duzib211G0528 Durio zibethinus HOM05D003989 ORTHO05D004626 5.5e-81 304.7 206 70.4
Lj1A67G39 Lonicera japonica HOM05D003989 ORTHO05D004626 5.5e-81 304.7 206 68.9
Gohir.D07G155200 Gossypium hirsutum HOM05D003989 ORTHO05D004626 7.1e-81 304.3 206 68.9
Potri.002G037900 Populus trichocarpa HOM05D003989 ORTHO05D004626 7.1e-81 304.3 206 67.5
Hma1.2p1_0576F.1_g182030 Hydrangea macrophylla HOM05D003989 ORTHO05D004626 1.6e-80 303.1 206 69.4
Manes.12G032900 Manihot esculenta HOM05D003989 ORTHO05D004626 2.1e-80 302.8 206 68.4
Hund09614 Selenicereus undatus HOM05D003989 ORTHO05D004626 2.1e-80 302.8 205 68.3
CAN.G1147.6 Capsicum annuum HOM05D003989 ORTHO05D004626 2.7e-80 302.4 214 67.8
Cpa.g.sc50.14 Carica papaya HOM05D003989 ORTHO05D004626 2.7e-80 302.4 206 68.0
MELO3C012749.2 Cucumis melo HOM05D003989 ORTHO05D004626 3.5e-80 302.0 212 66.0
CsaV3_7G027030 Cucumis sativus L. HOM05D003989 ORTHO05D004626 3.5e-80 302.0 206 66.5
Prupe.8G222700 Prunus persica HOM05D003989 ORTHO05D004626 3.5e-80 302.0 206 68.9
ECA236G3729 Erigeron canadensis HOM05D003989 ORTHO05D004626 4.6e-80 301.6 206 70.4
Lalb_Chr21g0313881 Lupinus albus HOM05D003989 ORTHO05D004626 6.0e-80 301.2 204 69.1
MD05G1196300 Malus domestica HOM05D003989 ORTHO05D004626 1.0e-79 300.4 206 68.0
Solyc09g025250.4 Solanum lycopersicum HOM05D003989 ORTHO05D004626 1.3e-79 300.1 206 70.4
Sopen09g028270 Solanum pennellii HOM05D003989 ORTHO05D004626 1.3e-79 300.1 206 70.4
FAN15G1221 Fragaria x ananassa HOM05D003989 ORTHO05D004626 1.8e-79 299.7 212 67.0
Gohir.A07G148900 Gossypium hirsutum HOM05D003989 ORTHO05D004626 3.0e-79 298.9 209 68.4
Gorai.001G177700 Gossypium raimondii HOM05D003989 ORTHO05D004626 3.0e-79 298.9 209 67.9
PSO210G1270 Papaver somniferum HOM05D003989 ORTHO05D004626 3.0e-79 298.9 206 67.5
PSO832G2594 Papaver somniferum HOM05D003989 ORTHO05D004626 3.0e-79 298.9 206 67.5
FAN27G0191 Fragaria x ananassa HOM05D003989 ORTHO05D004626 3.9e-79 298.5 212 66.5
PGSC0003DMG400010319 Solanum tuberosum HOM05D003989 ORTHO05D004626 3.9e-79 298.5 207 70.5
Aqoxy5G00222 Aquilegia oxysepala HOM05D003989 ORTHO05D004626 6.7e-79 297.7 207 69.1
FAN20G0664 Fragaria x ananassa HOM05D003989 ORTHO05D004626 1.5e-78 296.6 212 66.5
Haze_24640 Corylus avellana HOM05D003989 ORTHO05D004626 3.3e-78 295.4 231 60.6
Glyma.13G123800 Glycine max HOM05D003989 ORTHO05D004626 3.3e-78 295.4 206 69.4
CiPaw.03G265100 Carya illinoinensis HOM05D003989 ORTHO05D004626 4.3e-78 295.0 211 65.9
FAN24G0489 Fragaria x ananassa HOM05D003989 ORTHO05D004626 9.7e-78 293.9 217 65.4
Rhsim13G0035500 Rhododendron simsii HOM05D003989 ORTHO05D004626 9.7e-78 293.9 183 76.0
SGA_v2.0_scaffold1G00618 Striga asiatica HOM05D003989 ORTHO05D004626 2.8e-77 292.4 205 66.8
Peaxi162Scf01280g00015 Petunia axillaris HOM05D003989 ORTHO05D004626 8.2e-77 290.8 182 75.3
CANSAT01G0960 Cannabis sativa HOM05D003989 ORTHO05D004626 1.1e-76 290.4 206 64.1
AUR62024686 Chenopodium quinoa HOM05D003989 ORTHO05D004626 1.4e-76 290.0 183 71.0
Sabra02G0030600 Salix brachista HOM05D003989 ORTHO05D004626 2.4e-76 289.3 229 59.8
arahy.Tifrunner.gnm1.ann1.IYUI89 Arachis hypogaea HOM05D003989 ORTHO05D004626 3.1e-76 288.9 178 72.5
vmacro14818 Vaccinium macrocarpon HOM05D003989 ORTHO05D004626 3.1e-76 288.9 206 67.5
CSS0015513 Camellia sinensis var. sinensis HOM05D003989 ORTHO05D004626 4.1e-76 288.5 206 68.0
GSVIVG01028345001 Vitis vinifera HOM05D003989 ORTHO05D004626 6.9e-76 287.7 245 57.1
CDE04G0538 Ceratophyllum demersum HOM05D001473 ORTHO05D003900 9.0e-76 287.3 206 64.1
Gorai.001G254000 Gossypium raimondii HOM05D003989 ORTHO05D004626 9.0e-76 287.3 206 65.0
Cfa002434 Carpinus fangiana HOM05D003989 ORTHO05D004626 2.0e-75 286.2 207 65.7
TWI12G0613 Tripterygium wilfordii HOM05D003989 ORTHO05D004626 2.0e-75 286.2 204 64.7
CSS0015006 Camellia sinensis var. sinensis HOM05D003989 ORTHO05D004626 2.6e-75 285.8 206 64.6
DCAR_018490 Daucus carota HOM05D003989 ORTHO05D004626 5.0e-74 281.6 204 63.7
MBI10_g23171_MAGBIO Magnolia biondii HOM05D003989 ORTHO05D004626 5.0e-74 281.6 207 64.7
Migut.D00429 Erythranthe guttata HOM05D003989 ORTHO05D004626 1.9e-73 279.6 205 63.4
Eucgr.K03258 Eucalyptus grandis HOM05D003989 ORTHO05D004626 2.5e-73 279.3 206 62.1
TWI75G1341 Tripterygium wilfordii HOM05D003989 ORTHO05D004626 3.2e-73 278.9 206 62.1
SGA_v2.0_scaffold138G35226 Striga asiatica HOM05D003989 ORTHO05D004626 4.2e-73 278.5 204 63.7
ATR0736G179 Amborella trichopoda HOM05D003989 ORTHO05D004626 9.3e-73 277.3 207 63.8
Cc01_g18270 Coffea canephora HOM05D003989 ORTHO05D004626 1.6e-72 276.6 206 67.0
TAR633G0447 Trochodendron aralioides HOM05D003989 ORTHO05D004626 6.7e-71 271.2 183 69.4
COL.COLO4_03876 Corchorus olitorius HOM05D003989 ORTHO05D004626 1.5e-70 270.0 206 60.2
TAR636G0965 Trochodendron aralioides HOM05D003989 ORTHO05D004626 1.9e-70 269.6 208 63.0
ClCG09G008040 Citrullus lanatus HOM05D003989 ORTHO05D004626 7.4e-70 267.7 255 53.3
QL09p039095 Quercus lobata HOM05D003989 ORTHO05D004626 7.4e-70 267.7 304 46.7
Lj2A1151T33 Lonicera japonica HOM05D003989 ORTHO05D004626 9.7e-70 267.3 183 69.9
TAR362G1008 Trochodendron aralioides HOM05D003989 ORTHO05D004626 2.8e-69 265.8 183 68.3
Migut.N02208 Erythranthe guttata HOM05D003989 ORTHO05D004626 4.8e-69 265.0 206 63.1
THA.LOC104815848 Tarenaya hassleriana HOM05D003989 ORTHO05D004626 1.1e-68 263.8 206 60.7
HPP92_008957 Vanilla planifolia HOM05D003989 ORTHO05D004626 1.8e-68 263.1 206 59.7
CDE04G0232 Ceratophyllum demersum HOM05D003989 ORTHO05D004626 3.1e-68 262.3 206 60.2
Os04g0102600 Oryza sativa ssp. japonica HOM05D003989 ORTHO05D004626 5.3e-68 261.5 207 59.9
SGA_v2.0_scaffold2G00880 Striga asiatica HOM05D003989 ORTHO05D004626 9.1e-68 260.8 204 62.7
Thhalv10017243m.g Eutrema salsugineum HOM05D003989 ORTHO05D004626 1.2e-67 260.4 205 58.5
AL4G26330 Arabidopsis lyrata HOM05D003989 ORTHO05D004626 1.5e-67 260.0 206 59.7
BraA03t11012Z Brassica rapa HOM05D003989 ORTHO05D004626 4.5e-67 258.5 205 60.0
BcaC01g05976 Brassica carinata HOM05D003989 ORTHO05D004626 7.7e-67 257.7 205 59.5
C03p20540 Brassica napus HOM05D003989 ORTHO05D004626 7.7e-67 257.7 205 59.5
BolC3t14434H Brassica oleracea HOM05D003989 ORTHO05D004626 7.7e-67 257.7 205 59.5
Thhalv10008791m.g Eutrema salsugineum HOM05D003989 ORTHO05D004626 1.3e-66 256.9 206 58.7
BraA10t42752Z Brassica rapa HOM05D003989 ORTHO05D004626 2.2e-66 256.1 206 58.3
Sp1g05010 Schrenkiella parvula HOM05D003989 ORTHO05D004626 2.2e-66 256.1 206 60.7
AT2G31140 Arabidopsis thaliana HOM05D003989 ORTHO05D004626 2.9e-66 255.8 206 58.7
BcaB01g04061 Brassica carinata HOM05D003989 ORTHO05D004626 2.9e-66 255.8 205 59.0
BcaB02g06815 Brassica carinata HOM05D003989 ORTHO05D004626 2.9e-66 255.8 206 59.2
Sp4g13620 Schrenkiella parvula HOM05D003989 ORTHO05D004626 3.8e-66 255.4 205 58.0
THA.LOC104800868 Tarenaya hassleriana HOM05D003989 ORTHO05D004626 3.8e-66 255.4 209 59.3
C05p04520 Brassica napus HOM05D003989 ORTHO05D004626 1.1e-65 253.8 206 57.8
CARHR005730 Cardamine hirsuta HOM05D003989 ORTHO05D004626 1.9e-65 253.1 206 57.3
AL1G16180 Arabidopsis lyrata HOM05D003989 ORTHO05D004626 5.5e-65 251.5 206 56.8
Carub.0001s0556 Capsella rubella HOM05D003989 ORTHO05D004626 5.5e-65 251.5 207 57.5
AT1G06200 Arabidopsis thaliana HOM05D003989 ORTHO05D004626 7.2e-65 251.1 205 56.6
Carub.0004s1243 Capsella rubella HOM05D003989 ORTHO05D004626 1.2e-64 250.4 206 57.3
Ciclev10022360m.g Citrus clementina HOM05D003989 ORTHO05D004626 1.2e-64 250.4 185 61.6
BolC5t29223H Brassica oleracea HOM05D003989 ORTHO05D004626 4.6e-64 248.4 219 54.8
MSTRG.17493 Avicennia marina HOM05D003989 ORTHO05D004626 6.1e-64 248.1 204 61.3
BraA08t35517Z Brassica rapa HOM05D003989 ORTHO05D004626 2.3e-63 246.1 206 57.3
CARHR124740 Cardamine hirsuta HOM05D003989 ORTHO05D004626 3.0e-63 245.7 206 57.3
ATR0736G119 Amborella trichopoda HOM05D003989 ORTHO05D004626 3.9e-63 245.4 202 58.9
Gohir.D07G219600 Gossypium hirsutum HOM05D003989 ORTHO05D004626 5.1e-63 245.0 206 58.7
MSTRG.18323 Avicennia marina HOM05D003989 ORTHO05D004626 1.1e-62 243.8 206 60.2
Gohir.A07G213400 Gossypium hirsutum HOM05D003989 ORTHO05D004626 1.5e-62 243.4 206 58.3
BcaB03g13432 Brassica carinata HOM05D003989 ORTHO05D004626 4.4e-62 241.9 207 57.5
Zm00001eb089650 Zea mays HOM05D003989 ORTHO05D004626 2.2e-61 239.6 207 56.5
C08p02410 Brassica napus HOM05D003989 ORTHO05D004626 4.8e-61 238.4 214 54.7
AUR62011843 Chenopodium quinoa HOM05D003989 ORTHO05D004626 6.3e-61 238.0 209 55.0
BcaC05g24296 Brassica carinata HOM05D003989 ORTHO05D004626 1.4e-60 236.9 182 61.0
A08p36100 Brassica napus HOM05D003989 ORTHO05D004626 6.9e-60 234.6 214 54.2
CiPaw.04G187100 Carya illinoinensis HOM05D003989 ORTHO05D004626 2.0e-59 233.0 203 55.7
Lsat_1_v5_gn_8_92701 Lactuca sativa HOM05D003989 ORTHO05D004626 2.6e-59 232.6 147 76.9
SMO238G0041 Selaginella moellendorffii HOM05D003989 ORTHO05D004626 1.1e-57 227.3 195 54.4
Aa31LG5G5780 Aethionema arabicum HOM05D003989 ORTHO05D004626 6.1e-56 221.5 176 59.7
unitig_60.g25751 Utricularia gibba HOM05D003989 ORTHO05D004626 1.8e-55 219.9 206 55.3
SalBow6G3340 Salvia bowleyana HOM05D003989 ORTHO05D004626 2.3e-55 219.5 203 56.2
Zm00001eb418960 Zea mays HOM05D003989 ORTHO05D004626 1.5e-54 216.9 232 50.0
COL.COLO4_04036 Corchorus olitorius HOM05D003989 ORTHO05D004626 2.6e-54 216.1 183 57.4
unitig_22.g5457 Utricularia gibba HOM05D003989 ORTHO05D004626 9.7e-54 214.2 206 53.9
Pp3c12_14220 Physcomitrium patens HOM05D003989 ORTHO05D004626 1.1e-52 210.7 201 51.7
Nitab4.5_0005001g0020 Nicotiana tabacum HOM05D003989 ORTHO05D004626 1.8e-52 209.9 136 69.9
Pp3c3_23160 Physcomitrium patens HOM05D003989 ORTHO05D004626 5.3e-52 208.4 199 50.3
PGR044G1132 Punica granatum HOM05D003989 ORTHO05D004626 1.2e-48 197.2 146 60.3
Medtr1g069890 Medicago truncatula HOM05D003989 ORTHO05D004626 2.7e-48 196.1 119 84.0
Actinidia30162 Actinidia chinensis HOM05D003989 ORTHO05D004626 1.0e-47 194.1 143 59.4
EL10Ac3g04998 Beta vulgaris HOM05D003989 ORTHO05D004626 1.0e-47 194.1 204 48.5
Mapoly0108s0055 Marchantia polymorpha HOM05D003989 ORTHO05D004626 5.2e-47 191.8 195 48.7
CBR_g23031 Chara braunii HOM05D003989 ORTHO05D004626 6.7e-47 191.4 204 46.1
Oeu025856.1 Olea europaea HOM05D003989 ORTHO05D004626 9.7e-46 187.6 124 76.6
AUR62002143 Chenopodium quinoa HOM05D003989 ORTHO05D004626 1.4e-44 183.7 196 49.5
AUR62015563 Chenopodium quinoa HOM05D003989 ORTHO05D004626 4.5e-43 178.7 189 50.3
Actinidia09544 Actinidia chinensis HOM05D003989 ORTHO05D004626 5.9e-43 178.3 122 73.8
SEGI_09904 Sequoiadendron giganteum HOM05D003989 ORTHO05D004626 1.3e-42 177.2 146 53.4
Ah.13g072470 Amaranthus hybridus HOM05D003989 ORTHO05D004626 2.9e-42 176.0 173 52.6
Hund03044 Selenicereus undatus HOM05D003989 ORTHO05D004626 6.8e-39 164.9 194 44.3
AUR62015565 Chenopodium quinoa HOM05D003989 ORTHO05D004626 7.5e-38 161.4 196 44.4
EL10Ac3g05001 Beta vulgaris HOM05D003989 ORTHO05D004626 3.7e-37 159.1 178 46.6
Carub.0007s3141 Capsella rubella HOM05D003989 ORTHO05D004626 7.7e-35 151.4 119 63.9
Hund03045 Selenicereus undatus HOM05D003989 ORTHO05D004626 8.6e-34 147.9 199 40.2
AagrBONN_evm.TU.Sc2ySwM_228.3815 Anthoceros agrestis HOM05D003989 ORTHO05D004626 2.6e-30 136.3 152 44.7
MCO11G084 Micromonas commoda HOM05D003989 ORTHO05D004626 2.6e-22 109.8 221 34.4
BcaB06g28424 Brassica carinata HOM05D003989 ORTHO05D004626 8.3e-21 104.8 146 40.4
Medtr1g069860 Medicago truncatula HOM05D003989 ORTHO05D004626 1.4e-20 104.0 67 76.1
Cre16.g694703 Chlamydomonas reinhardtii HOM05D003989 ORTHO05D004626 2.0e-19 100.1 164 36.0
A10p04820 Brassica napus HOM05D005109 ORTHO05D006084 4.6e-19 99.0 111 41.4
A04p23940 Brassica napus HOM05D003989 ORTHO05D004626 1.3e-18 97.4 94 58.5
BraA04t17918Z Brassica rapa HOM05D003989 ORTHO05D004626 1.3e-18 97.4 94 58.5
BcaB06g28507 Brassica carinata HOM05D003989 ORTHO05D004626 1.4e-15 87.4 92 50.0
AUR62015564 Chenopodium quinoa HOM05D003989 ORTHO05D004626 1.4e-15 87.4 162 35.8
C04p60570 Brassica napus HOM05D003989 ORTHO05D004626 8.9e-15 84.7 67 65.7
BcaC02g11217 Brassica carinata HOM05D003989 ORTHO05D004626 2.5e-09 66.6 46 60.9
BcaC02g11218 Brassica carinata HOM05D003989 ORTHO05D004626 2.5e-09 66.6 46 60.9
BolC4t23443H Brassica oleracea HOM05D003989 ORTHO05D004626 2.5e-09 66.6 46 60.9
C04p19080 Brassica napus HOM05D003989 ORTHO05D004626 4.3e-09 65.9 46 60.9
MD05G1287400 Malus domestica HOM05D001774 ORTHO05D001663 8.1e-08 61.6 130 32.3
RcHm_v2.0_Chr5g0013501 Rosa chinensis HOM05D001774 ORTHO05D001663 8.1e-08 61.6 185 31.4
SMO117G0314 Selaginella moellendorffii HOM05D001774 ORTHO05D001663 8.1e-08 61.6 128 34.4
Hund21516 Selenicereus undatus HOM05D001774 ORTHO05D001663 1.8e-07 60.5 133 29.3
FvH4_3g05970 Fragaria vesca HOM05D001774 ORTHO05D001663 1.2e-06 57.8 180 30.0
Lalb_Chr01g0007351 Lupinus albus HOM05D001774 ORTHO05D001663 1.2e-06 57.8 139 30.9
CARHR029470 Cardamine hirsuta HOM05D001774 ORTHO05D001663 1.5e-06 57.4 142 28.2
Thecc.06G153800 Theobroma cacao HOM05D001774 ORTHO05D001663 1.5e-06 57.4 150 28.0
FAN11G3092 Fragaria x ananassa HOM05D001937 ORTHO05D003828 5.8e-06 55.5 169 32.0
Sc17g0005050 Simmondsia chinensis HOM05D001774 ORTHO05D001663 5.8e-06 55.5 156 28.8
Rhsim06G0187400 Rhododendron simsii HOM05D001774 ORTHO05D001663 7.5e-06 55.1 120 30.8


User provided reference genes

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