Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09611_v3 Cicer arietinum L. HOM05D006895 ORTHO05D008605 1.8e-116 424.1 610 100.0
Psat6g065920 Pisum sativum HOM05D006895 ORTHO05D008605 9.2e-68 262.3 606 88.9
Medtr1g068960 Medicago truncatula HOM05D006895 ORTHO05D008605 8.4e-61 239.2 132 90.2
Haze_20748 Corylus avellana HOM05D006895 ORTHO05D008605 1.1e-55 222.2 145 75.2
Psat6g065880 Pisum sativum HOM05D006895 ORTHO05D008605 1.3e-53 215.3 607 83.9
TPR.G30959 Trifolium pratense HOM05D006895 ORTHO05D008605 3.1e-47 194.1 611 77.6
Migut.O00943 Erythranthe guttata HOM05D006895 ORTHO05D008605 4.2e-44 183.7 137 65.0
Atru.chr8.1949 Acer truncatum HOM05D006895 ORTHO05D008605 1.5e-41 175.3 116 73.3
Atru.BG.222.p Acer truncatum HOM05D006895 ORTHO05D008605 3.3e-41 174.1 116 72.4
Carub.0005s2028 Capsella rubella HOM05D006895 ORTHO05D008605 3.3e-41 174.1 131 64.9
AT3G53700 Arabidopsis thaliana HOM05D006895 ORTHO05D008605 1.6e-40 171.8 128 64.1
CsaV3_4G024770 Cucumis sativus L. HOM05D006895 ORTHO05D008605 4.8e-40 170.2 116 69.8
AL5G34670 Arabidopsis lyrata HOM05D006895 ORTHO05D008605 2.4e-39 167.9 127 63.8
MELO3C003111.2 Cucumis melo HOM05D006895 ORTHO05D008605 3.1e-39 167.5 116 69.0
RcHm_v2.0_Chr3g0467211 Rosa chinensis HOM05D006895 ORTHO05D008605 3.1e-39 167.5 112 71.4
Cpa.g.sc312.1 Carica papaya HOM05D006895 ORTHO05D008605 4.0e-39 167.2 148 58.8
Thhalv10010142m.g Eutrema salsugineum HOM05D006895 ORTHO05D008605 5.3e-39 166.8 123 67.5
BcaC02g09140 Brassica carinata HOM05D006895 ORTHO05D008605 6.9e-39 166.4 121 67.8
CARHR163610 Cardamine hirsuta HOM05D006895 ORTHO05D008605 6.9e-39 166.4 126 65.1
Sp5g08680 Schrenkiella parvula HOM05D006895 ORTHO05D008605 6.9e-39 166.4 123 66.7
Ciclev10013605m.g Citrus clementina HOM05D006895 ORTHO05D008605 1.2e-38 165.6 107 75.7
BcaB02g08515 Brassica carinata HOM05D006895 ORTHO05D008605 4.5e-38 163.7 121 66.9
A04p05930 Brassica napus HOM05D006895 ORTHO05D008605 4.5e-38 163.7 121 66.9
C04p38850 Brassica napus HOM05D006895 ORTHO05D008605 4.5e-38 163.7 121 66.9
Potri.004G013300 Populus trichocarpa HOM05D006895 ORTHO05D008605 4.5e-38 163.7 116 70.7
COL.COLO4_14849 Corchorus olitorius HOM05D001886 ORTHO05D005666 1.7e-37 161.8 103 76.7
BraA04t16297Z Brassica rapa HOM05D006895 ORTHO05D008605 3.8e-37 160.6 121 66.1
Actinidia13132 Actinidia chinensis HOM05D006895 ORTHO05D008605 6.4e-37 159.8 149 55.7
AUR62020014 Chenopodium quinoa HOM05D006895 ORTHO05D008605 6.4e-37 159.8 115 67.0
Manes.08G078400 Manihot esculenta HOM05D006895 ORTHO05D008605 8.4e-37 159.5 112 69.6
BolC4t25457H Brassica oleracea HOM05D006895 ORTHO05D008605 1.1e-36 159.1 118 66.9
Nitab4.5_0003267g0080 Nicotiana tabacum HOM05D006895 ORTHO05D008605 1.1e-36 159.1 116 66.4
PGSC0003DMG400008927 Solanum tuberosum HOM05D006895 ORTHO05D008605 4.2e-36 157.1 116 66.4
THA.LOC104806571 Tarenaya hassleriana HOM05D006895 ORTHO05D008605 4.2e-36 157.1 115 65.2
Nitab4.5_0002077g0070 Nicotiana tabacum HOM05D006895 ORTHO05D008605 5.5e-36 156.8 116 64.7
Solyc09g010450.1 Solanum lycopersicum HOM05D006895 ORTHO05D008605 2.7e-35 154.5 115 66.1
Sopen09g005190 Solanum pennellii HOM05D006895 ORTHO05D008605 2.7e-35 154.5 115 66.1
Aqoxy3G03023 Aquilegia oxysepala HOM05D006895 ORTHO05D008605 7.9e-35 152.9 116 63.8
CAN.G97.15 Capsicum annuum HOM05D006895 ORTHO05D008605 7.9e-35 152.9 113 68.1
Rhsim04G0155800 Rhododendron simsii HOM05D006895 ORTHO05D008605 7.9e-35 152.9 121 62.8
PSO648G0005 Papaver somniferum HOM05D006895 ORTHO05D008605 1.8e-34 151.8 117 65.0
PSO339G3203 Papaver somniferum HOM05D006895 ORTHO05D008605 2.3e-34 151.4 117 65.0
HanXRQChr01g0026741 Helianthus annuus HOM05D006895 ORTHO05D008605 3.0e-34 151.0 145 49.0
MD12G1138900 Malus domestica HOM05D006895 ORTHO05D008605 1.5e-33 148.7 97 77.3
Oeu049215.1 Olea europaea HOM05D006895 ORTHO05D008605 1.5e-33 148.7 112 62.5
Eucgr.K03156 Eucalyptus grandis HOM05D006895 ORTHO05D008605 1.3e-32 145.6 108 67.6
Prupe.6G250800 Prunus persica HOM05D006895 ORTHO05D008605 1.6e-32 145.2 101 71.3
Rhsim04G0155700 Rhododendron simsii HOM05D006895 ORTHO05D008605 2.8e-32 144.4 111 64.0
Aa31LG10G9340 Aethionema arabicum HOM05D006895 ORTHO05D008605 6.2e-32 143.3 115 60.9
FvH4_6g14250 Fragaria vesca HOM05D006895 ORTHO05D008605 9.0e-31 139.4 110 61.8
FAN14G2414 Fragaria x ananassa HOM05D006895 ORTHO05D008605 9.0e-31 139.4 110 61.8
FAN05G0539 Fragaria x ananassa HOM05D006895 ORTHO05D008605 2.0e-30 138.3 110 60.9
Migut.J00352 Erythranthe guttata HOM05D006895 ORTHO05D008605 3.4e-30 137.5 113 57.5
Sc01g0004190 Simmondsia chinensis HOM05D006895 ORTHO05D008605 5.8e-30 136.7 112 58.9
FAN09G2819 Fragaria x ananassa HOM05D006895 ORTHO05D008605 1.0e-29 136.0 110 60.0
Cfa017422 Carpinus fangiana HOM05D006895 ORTHO05D008605 1.3e-29 135.6 116 61.2
CiPaw.10G143400 Carya illinoinensis HOM05D006895 ORTHO05D008605 1.7e-29 135.2 111 63.1
Glyma.13G131600 Glycine max HOM05D006895 ORTHO05D008605 4.9e-29 133.7 108 65.7
Lalb_Chr02g0153051 Lupinus albus HOM05D006895 ORTHO05D008605 4.9e-29 133.7 111 64.9
Phvul.007G157700 Phaseolus vulgaris HOM05D006895 ORTHO05D008605 6.5e-29 133.3 110 62.7
ClCG04G008380 Citrullus lanatus HOM05D006895 ORTHO05D008605 8.4e-29 132.9 113 59.3
Lj5g0004082 Lotus japonicus HOM05D006895 ORTHO05D008605 8.4e-29 132.9 117 63.2
Gohir.A04G081000 Gossypium hirsutum HOM05D006895 ORTHO05D008605 4.2e-28 130.6 114 56.1
Actinidia05301 Actinidia chinensis HOM05D006895 ORTHO05D008605 5.5e-28 130.2 108 61.1
VMungo0720G1504 Vigna mungo HOM05D006895 ORTHO05D008605 5.5e-28 130.2 110 61.8
Gohir.D04G119700 Gossypium hirsutum HOM05D006895 ORTHO05D008605 7.1e-28 129.8 114 57.0
Gorai.012G101800 Gossypium raimondii HOM05D006895 ORTHO05D008605 7.1e-28 129.8 114 57.0
vmacro08665 Vaccinium macrocarpon HOM05D006895 ORTHO05D008605 1.2e-27 129.0 111 59.5
TWI77G0080 Tripterygium wilfordii HOM05D006895 ORTHO05D008605 2.1e-27 128.3 110 57.3
Rhsim04G0155400 Rhododendron simsii HOM05D006895 ORTHO05D008605 3.5e-27 127.5 110 55.5
Thecc.05G043800 Theobroma cacao HOM05D006895 ORTHO05D008605 4.6e-27 127.1 110 60.9
EL10Ac8g18760 Beta vulgaris HOM05D006895 ORTHO05D008605 6.0e-27 126.7 118 55.9
Ah.09g224140 Amaranthus hybridus HOM05D006895 ORTHO05D008605 1.3e-26 125.6 115 55.7
Duzib128G0849 Durio zibethinus HOM05D006895 ORTHO05D008605 1.3e-26 125.6 116 56.9
Sed0013405 Sechium edule HOM05D006895 ORTHO05D008605 1.5e-25 122.1 105 59.0
Rhsim04G0155500 Rhododendron simsii HOM05D006895 ORTHO05D008605 2.8e-24 117.9 110 51.8
Zm00001eb043060 Zea mays HOM05D006895 ORTHO05D008605 3.7e-24 117.5 100 57.0
Lsat_1_v5_gn_1_55640 Lactuca sativa HOM05D006895 ORTHO05D008605 6.3e-24 116.7 148 41.9
Sabra04G0006200 Salix brachista HOM05D006895 ORTHO05D008605 1.8e-23 115.2 87 65.5
CSS0025676 Camellia sinensis var. sinensis HOM05D006895 ORTHO05D008605 2.4e-23 114.8 110 53.6
CANSAT80G0660 Cannabis sativa HOM05D006895 ORTHO05D008605 2.4e-23 114.8 103 56.3
TAR636G1679 Trochodendron aralioides HOM05D006895 ORTHO05D008605 2.4e-23 114.8 112 51.8
CSS0020348 Camellia sinensis var. sinensis HOM05D006895 ORTHO05D008605 3.1e-23 114.4 108 54.6
QL07p047413 Quercus lobata HOM05D006895 ORTHO05D008605 3.1e-23 114.4 102 59.8
Os03g0597200 Oryza sativa ssp. japonica HOM05D006895 ORTHO05D008605 4.1e-23 114.0 100 55.0
SalBow3G1315 Salvia bowleyana HOM05D006895 ORTHO05D008605 4.1e-23 114.0 112 51.8
SGA_v2.0_scaffold126G33817 Striga asiatica HOM05D006895 ORTHO05D008605 6.9e-23 113.2 92 58.7
Dinv35630 Davidia involucrata HOM05D006895 ORTHO05D008605 1.2e-22 112.5 111 53.2
QL05p010620 Quercus lobata HOM05D006895 ORTHO05D008605 1.2e-22 112.5 102 58.8
PGR004G1128 Punica granatum HOM05D006895 ORTHO05D008605 3.8e-21 107.5 105 52.4
DCAR_009247 Daucus carota HOM05D006895 ORTHO05D008605 1.9e-20 105.1 110 47.3
GSVIVG01025524001 Vitis vinifera HOM05D006895 ORTHO05D008605 1.9e-20 105.1 143 43.4
Nn8g40743 Nelumbo nucifera HOM05D006895 ORTHO05D008605 4.2e-20 104.0 98 54.1
Lj2C99T13 Lonicera japonica HOM05D006895 ORTHO05D008605 5.5e-20 103.6 109 49.5
Rhsim04G0155600 Rhododendron simsii HOM05D006895 ORTHO05D008605 6.7e-18 96.7 103 50.5
SGA_v2.0_scaffold126G33815 Striga asiatica HOM05D006895 ORTHO05D008605 1.9e-17 95.1 100 49.0
MSTRG.5682 Avicennia marina HOM05D006895 ORTHO05D008605 7.4e-17 93.2 112 43.8
ATR0559G329 Amborella trichopoda HOM05D006895 ORTHO05D008605 1.6e-16 92.0 95 48.4
TAR633G1621 Trochodendron aralioides HOM05D006895 ORTHO05D008605 4.1e-15 87.4 90 50.0
MBI14_g24311_MAGBIO Magnolia biondii HOM05D006895 ORTHO05D008605 5.3e-15 87.0 102 44.1
ECA248G3443 Erigeron canadensis HOM05D006895 ORTHO05D008605 6.9e-15 86.7 112 40.2
CDE04G3188 Ceratophyllum demersum HOM05D006895 ORTHO05D008605 1.0e-13 82.8 94 47.9
SEGI_15105 Sequoiadendron giganteum HOM05D006895 ORTHO05D008605 1.7e-13 82.0 87 44.8
VMungo1309G3120 Vigna mungo HOM05D000949 ORTHO05D009565 1.9e-12 78.6 85 52.9
Cc06_g02910 Coffea canephora HOM05D006895 ORTHO05D008605 2.5e-12 78.2 102 42.2
VMungo0720G1993 Vigna mungo HOM05D000048 ORTHO05D000207 4.6e-11 73.9 98 44.9
Rhsim04G0155200 Rhododendron simsii HOM05D006895 ORTHO05D008605 1.4e-10 72.4 140 34.3
Sabra11G0003600 Salix brachista HOM05D001191 ORTHO05D000979 2.0e-09 68.6 69 52.2
ATR0661G162 Amborella trichopoda HOM05D006895 ORTHO05D008605 3.3e-09 67.8 94 41.5
SGA_v2.0_scaffold135G34956 Striga asiatica HOM05D006895 ORTHO05D000289 1.3e-08 65.9 108 38.9
SEGI_21341 Sequoiadendron giganteum HOM05D000891 ORTHO05D002107 3.7e-08 64.3 69 47.8
MSTRG.19138 Avicennia marina HOM05D000855 ORTHO05D008530 4.8e-08 63.9 125 29.6
Nitab4.5_0000588g0140 Nicotiana tabacum HOM05D005833 ORTHO05D008135 4.8e-08 63.9 113 31.0
Hund13263 Selenicereus undatus HOM05D007128 ORTHO05D000105 4.8e-08 63.9 101 31.7
Ca_01065_v3 Cicer arietinum L. HOM05D000891 ORTHO05D000761 1.4e-07 62.4 112 33.0
Lalb_Chr02g0153641 Lupinus albus HOM05D000855 ORTHO05D008530 1.4e-07 62.4 100 32.0
SEGI_37919 Sequoiadendron giganteum HOM05D006895 ORTHO05D008605 1.4e-07 62.4 67 47.8
AL2G36360 Arabidopsis lyrata HOM05D005833 ORTHO05D008135 1.8e-07 62.0 113 30.1
PGSC0003DMG400009977 Solanum tuberosum HOM05D005833 ORTHO05D008135 2.4e-07 61.6 113 31.0
Prupe.4G052800 Prunus persica HOM05D002986 ORTHO05D007611 3.1e-07 61.2 89 37.1
Glyma.10G049200 Glycine max HOM05D000855 ORTHO05D008530 5.3e-07 60.5 117 31.6
CAN.G311.113 Capsicum annuum HOM05D005833 ORTHO05D008135 6.9e-07 60.1 108 30.6
Os01g0908800 Oryza sativa ssp. japonica HOM05D006980 ORTHO05D008704 6.9e-07 60.1 99 30.3
Sp6g36450 Schrenkiella parvula HOM05D006596 ORTHO05D008497 9.1e-07 59.7 121 31.4
FvH4_4g07830 Fragaria vesca HOM05D002986 ORTHO05D007611 1.2e-06 59.3 89 36.0
VMungo0720G3091 Vigna mungo HOM05D000855 ORTHO05D008530 1.2e-06 59.3 100 32.0
CDE09G0204 Ceratophyllum demersum HOM05D002986 ORTHO05D007611 1.5e-06 58.9 90 35.6
MELO3C035724.2 Cucumis melo HOM05D002986 ORTHO05D007611 1.5e-06 58.9 90 35.6
FAN07G2492 Fragaria x ananassa HOM05D002986 ORTHO05D007611 1.5e-06 58.9 89 36.0
CDE02G3715 Ceratophyllum demersum HOM05D002444 ORTHO05D009235 2.0e-06 58.5 126 28.6
FAN16G0081 Fragaria x ananassa HOM05D002986 ORTHO05D007611 2.0e-06 58.5 89 36.0
Peaxi162Scf00893g00432 Petunia axillaris HOM05D005833 ORTHO05D008135 2.0e-06 58.5 113 30.1
Solyc04g082320.3 Solanum lycopersicum HOM05D005833 ORTHO05D008135 2.0e-06 58.5 113 31.0
TWI36G0594 Tripterygium wilfordii HOM05D016681 ORTHO05D015207 2.0e-06 58.5 106 33.0
EL10Ac4g08466 Beta vulgaris HOM05D007085 ORTHO05D008828 2.6e-06 58.2 81 38.3
BcaC08g47126 Brassica carinata HOM05D005833 ORTHO05D008135 2.6e-06 58.2 114 27.2
Ca_17333_v3 Cicer arietinum L. HOM05D003689 ORTHO05D003950 2.6e-06 58.2 116 29.3
Eucgr.B01359 Eucalyptus grandis HOM05D002804 ORTHO05D003755 2.6e-06 58.2 91 33.0
FAN02G3427 Fragaria x ananassa HOM05D000855 ORTHO05D008530 2.6e-06 58.2 117 28.2
Psat6g067680 Pisum sativum HOM05D000855 ORTHO05D008530 2.6e-06 58.2 115 31.3
QL02p014018 Quercus lobata HOM05D005833 ORTHO05D008135 2.6e-06 58.2 113 29.2
RcHm_v2.0_Chr5g0009291 Rosa chinensis HOM05D002986 ORTHO05D007611 2.6e-06 58.2 89 36.0
GSVIVG01025536001 Vitis vinifera HOM05D000855 ORTHO05D008530 2.6e-06 58.2 117 29.9
Actinidia04698 Actinidia chinensis HOM05D000855 ORTHO05D008530 3.4e-06 57.8 125 28.8
AUR62026807 Chenopodium quinoa HOM05D005973 ORTHO05D007285 3.4e-06 57.8 101 31.7
Cc09_g07760 Coffea canephora HOM05D005973 ORTHO05D007285 3.4e-06 57.8 101 31.7
DCAR_007997 Daucus carota HOM05D002986 ORTHO05D007611 3.4e-06 57.8 81 39.5
Duzib235G0042 Durio zibethinus HOM05D002986 ORTHO05D007611 3.4e-06 57.8 89 34.8
Thhalv10012543m.g Eutrema salsugineum HOM05D006596 ORTHO05D008497 3.4e-06 57.8 105 33.3
Medtr1g066900 Medicago truncatula HOM05D000855 ORTHO05D008530 3.4e-06 57.8 115 31.3
Medtr2g103550 Medicago truncatula HOM05D000891 ORTHO05D000761 3.4e-06 57.8 112 31.2
Sp5g31420 Schrenkiella parvula HOM05D005833 ORTHO05D008135 3.4e-06 57.8 114 26.3
Sed0000822 Sechium edule HOM05D002986 ORTHO05D007611 3.4e-06 57.8 90 34.4
Dinv35708 Davidia involucrata HOM05D000855 ORTHO05D008530 4.5e-06 57.4 110 29.1
ECA248G3068 Erigeron canadensis HOM05D005973 ORTHO05D007285 4.5e-06 57.4 102 32.4
Eucgr.E03144 Eucalyptus grandis HOM05D002986 ORTHO05D007611 4.5e-06 57.4 101 32.7
FAN11G0723 Fragaria x ananassa HOM05D002986 ORTHO05D007611 4.5e-06 57.4 89 34.8
MD10G1288900 Malus domestica HOM05D002986 ORTHO05D007611 4.5e-06 57.4 90 36.7
Phvul.007G163500 Phaseolus vulgaris HOM05D000855 ORTHO05D008530 4.5e-06 57.4 115 30.4
Sabra16G0092100 Salix brachista HOM05D000855 ORTHO05D008530 4.5e-06 57.4 116 29.3
unitig_22.g5757 Utricularia gibba HOM05D002804 ORTHO05D003755 4.5e-06 57.4 111 30.6
FvH4_3g08550 Fragaria vesca HOM05D002986 ORTHO05D007611 5.9e-06 57.0 89 33.7
FAN25G0667 Fragaria x ananassa HOM05D002986 ORTHO05D007611 5.9e-06 57.0 88 35.2
Manes.08G003100 Manihot esculenta HOM05D000855 ORTHO05D008530 5.9e-06 57.0 115 30.4
Medtr7g070170 Medicago truncatula HOM05D018871 ORTHO05D019812 5.9e-06 57.0 81 34.6
VMungo0331G1630 Vigna mungo HOM05D002986 ORTHO05D007611 5.9e-06 57.0 94 31.9
ATR0564G055 Amborella trichopoda HOM05D002986 ORTHO05D007611 7.7e-06 56.6 99 30.3
CAN.G1003.15 Capsicum annuum HOM05D007172 ORTHO05D009267 7.7e-06 56.6 106 32.1
AUR62037245 Chenopodium quinoa HOM05D005973 ORTHO05D007285 7.7e-06 56.6 101 31.7
FAN22G0034 Fragaria x ananassa HOM05D002986 ORTHO05D007611 7.7e-06 56.6 89 36.0
PSO339G3775 Papaver somniferum HOM05D000855 ORTHO05D008530 7.7e-06 56.6 115 28.7
Peaxi162Scf00099g00032 Petunia axillaris HOM05D002986 ORTHO05D007611 7.7e-06 56.6 89 33.7
Potri.016G085300 Populus trichocarpa HOM05D000855 ORTHO05D008530 7.7e-06 56.6 116 29.3


User provided reference genes

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