Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 2.1e-111 405.6 190 100.0
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 2.9e-97 358.6 190 88.4
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 5.5e-96 354.4 190 86.3
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 1.0e-94 350.1 191 86.9
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 1.3e-92 343.2 192 83.9
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 4.9e-92 341.3 192 81.8
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 3.2e-91 338.6 191 82.7
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 1.3e-89 333.2 196 79.1
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 2.8e-87 325.5 190 79.5
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 2.5e-80 302.4 184 75.0
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.2e-79 300.1 188 72.3
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 1.1e-78 297.0 188 71.8
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.1e-78 297.0 188 71.8
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 1.1e-78 297.0 188 71.8
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 3.1e-78 295.4 189 70.9
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 3.1e-78 295.4 188 71.3
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 4.0e-78 295.0 188 70.2
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 4.0e-78 295.0 186 71.0
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 5.2e-78 294.7 187 71.7
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 1.5e-77 293.1 189 71.4
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 2.0e-77 292.7 189 71.4
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 2.6e-77 292.4 188 71.8
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 2.6e-77 292.4 188 70.7
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 2.6e-77 292.4 188 70.7
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 4.4e-77 291.6 184 72.8
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 7.5e-77 290.8 188 71.3
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 7.5e-77 290.8 186 71.5
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 9.8e-77 290.4 187 69.5
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 1.3e-76 290.0 188 70.2
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.7e-76 289.7 184 72.8
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 1.7e-76 289.7 184 71.7
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 1.7e-76 289.7 188 72.3
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 3.7e-76 288.5 187 69.5
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.1e-75 287.0 192 68.8
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 1.9e-75 286.2 186 72.0
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.9e-75 286.2 187 69.0
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.9e-75 286.2 187 69.0
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 1.9e-75 286.2 187 72.2
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 2.4e-75 285.8 188 69.7
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 2.4e-75 285.8 187 70.1
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 3.2e-75 285.4 188 70.7
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 4.1e-75 285.0 189 70.4
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 4.1e-75 285.0 187 67.9
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 4.1e-75 285.0 188 70.7
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 5.4e-75 284.6 189 70.4
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 5.4e-75 284.6 190 70.5
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 5.4e-75 284.6 184 69.0
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 7.1e-75 284.3 188 68.6
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 1.2e-74 283.5 188 71.8
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.6e-74 283.1 188 69.1
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 2.7e-74 282.3 186 71.0
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 2.7e-74 282.3 191 65.4
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 3.5e-74 282.0 189 69.3
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 3.5e-74 282.0 187 70.1
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 6.0e-74 281.2 190 68.9
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 7.8e-74 280.8 187 69.0
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 7.8e-74 280.8 183 70.5
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 7.8e-74 280.8 192 67.7
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 7.8e-74 280.8 187 69.0
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 7.8e-74 280.8 187 68.4
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 1.0e-73 280.4 189 68.8
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 1.0e-73 280.4 189 68.8
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 2.3e-73 279.3 190 69.5
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 2.3e-73 279.3 184 66.8
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 3.0e-73 278.9 188 68.1
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 3.0e-73 278.9 189 70.4
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 3.9e-73 278.5 187 67.4
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 3.9e-73 278.5 187 67.4
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 5.1e-73 278.1 187 67.4
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 8.6e-73 277.3 189 70.4
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 8.6e-73 277.3 190 64.7
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 1.1e-72 276.9 187 69.5
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 1.5e-72 276.6 189 69.8
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.5e-72 276.6 187 66.8
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 3.3e-72 275.4 191 70.7
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 4.3e-72 275.0 189 69.8
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 7.3e-72 274.2 189 69.8
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 2.1e-71 272.7 192 63.0
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 2.8e-71 272.3 186 67.2
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 2.8e-71 272.3 191 68.1
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 2.8e-71 272.3 186 65.1
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 3.6e-71 271.9 188 64.4
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 4.7e-71 271.6 191 69.6
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 6.2e-71 271.2 203 63.5
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 6.2e-71 271.2 188 68.1
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 1.1e-70 270.4 188 64.9
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 5.2e-70 268.1 190 66.3
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 2.6e-69 265.8 219 60.3
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 4.4e-69 265.0 188 64.9
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 5.8e-69 264.6 187 65.8
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 1.7e-68 263.1 182 65.9
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 2.9e-68 262.3 187 63.1
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 4.9e-68 261.5 184 62.5
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 8.4e-68 260.8 192 64.1
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 8.4e-68 260.8 188 67.0
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 3.2e-67 258.8 192 65.6
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 7.1e-67 257.7 184 62.0
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 9.2e-67 257.3 189 64.0
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.0e-65 253.8 184 61.4
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 2.3e-65 252.7 229 55.0
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 3.3e-64 248.8 187 62.0
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 2.8e-63 245.7 191 63.4
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 4.7e-63 245.0 184 63.6
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 1.2e-61 240.4 183 63.4
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.5e-61 240.0 144 74.3
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.5e-61 240.0 188 59.0
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 1.9e-59 233.0 187 57.2
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.9e-59 233.0 179 64.8
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 5.4e-59 231.5 185 59.5
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 3.5e-58 228.8 185 58.4
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.7e-57 226.5 183 60.7
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 2.5e-56 222.6 188 59.0
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 3.3e-56 222.2 188 59.6
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 4.3e-56 221.9 189 55.0
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 7.3e-56 221.1 146 68.5
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 6.9e-54 214.5 184 55.4
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 1.9e-51 206.5 183 54.1
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 7.9e-50 201.1 131 67.9
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 2.3e-49 199.5 185 50.8
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 4.6e-34 148.7 111 64.0
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.4e-30 136.3 84 67.9
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 4.5e-29 132.1 81 74.1
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 8.4e-28 127.9 109 54.1
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 6.3e-23 111.7 101 53.5
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.1e-19 100.9 115 47.0
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 6.7e-17 91.7 95 50.5
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 2.7e-10 69.7 78 47.4


User provided reference genes

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