Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_09177_v3 Cicer arietinum L. HOM05D000880 ORTHO05D004760 0.0e+00 1560.0 878 100.0
Psat3g021720 Pisum sativum HOM05D000880 ORTHO05D004760 0.0e+00 1121.7 888 72.2
Medtr7g108730 Medicago truncatula HOM05D000880 ORTHO05D004760 0.0e+00 1107.8 890 71.1
TPR.G9606 Trifolium pratense HOM05D000880 ORTHO05D004760 0.0e+00 1107.8 884 70.8
Glyma.19G211500 Glycine max HOM05D000880 ORTHO05D004760 5.7e-305 1050.8 894 70.6
Glyma.03G214900 Glycine max HOM05D000880 ORTHO05D004760 1.3e-304 1049.7 892 70.7
Lj1g0000333 Lotus japonicus HOM05D000880 ORTHO05D004760 5.9e-302 1040.8 894 67.4
Phvul.001G207700 Phaseolus vulgaris HOM05D000880 ORTHO05D004760 4.4e-297 1024.6 891 68.7
Lalb_Chr18g0046951 Lupinus albus HOM05D000880 ORTHO05D004760 1.1e-287 993.4 907 64.1
arahy.Tifrunner.gnm1.ann1.FAXC2W Arachis hypogaea HOM05D000880 ORTHO05D004760 3.5e-286 988.4 901 64.9
arahy.Tifrunner.gnm1.ann1.DCE7TU Arachis hypogaea HOM05D000880 ORTHO05D004760 2.3e-282 975.7 904 63.6
Medtr3g113240 Medicago truncatula HOM05D000880 ORTHO05D004760 2.2e-280 969.1 877 65.0
QL12p028379 Quercus lobata HOM05D000880 ORTHO05D004760 3.8e-256 888.6 886 58.1
Dinv33059 Davidia involucrata HOM05D000880 ORTHO05D004760 4.3e-252 875.2 914 53.6
GSVIVG01028028001 Vitis vinifera HOM05D000880 ORTHO05D004760 1.1e-250 870.5 899 56.4
CiPaw.07G109900 Carya illinoinensis HOM05D000880 ORTHO05D004760 8.4e-248 860.9 923 55.7
Manes.01G219900 Manihot esculenta HOM05D000880 ORTHO05D004760 2.5e-247 859.4 895 55.6
Ciclev10027776m.g Citrus clementina HOM05D000880 ORTHO05D004760 9.3e-247 857.4 914 54.5
Thecc.01G301500 Theobroma cacao HOM05D000880 ORTHO05D004760 1.3e-243 847.0 915 54.8
Cfa005904 Carpinus fangiana HOM05D000880 ORTHO05D004760 2.1e-243 846.3 847 58.6
TAR362G0476 Trochodendron aralioides HOM05D000880 ORTHO05D004760 1.1e-242 844.0 913 55.1
Haze_04946 Corylus avellana HOM05D000880 ORTHO05D004760 1.3e-240 837.0 866 56.8
Eucgr.K03490 Eucalyptus grandis HOM05D000880 ORTHO05D004760 3.8e-240 835.5 911 54.8
PGR044G0963 Punica granatum HOM05D000880 ORTHO05D004760 5.0e-240 835.1 906 54.9
Duzib138G0681 Durio zibethinus HOM05D000880 ORTHO05D004760 1.0e-237 827.4 911 54.1
Hma1.2p1_0494F.1_g165220 Hydrangea macrophylla HOM05D000880 ORTHO05D004760 1.1e-236 823.9 901 52.8
CANSAT25G3354 Cannabis sativa HOM05D000880 ORTHO05D004760 5.7e-236 821.6 888 55.4
Lj2A1196T50 Lonicera japonica HOM05D000880 ORTHO05D004760 1.3e-235 820.5 906 54.2
Oeu000551.1 Olea europaea HOM05D000880 ORTHO05D004760 4.8e-235 818.5 903 52.7
CSS0046847 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D004760 8.2e-235 817.8 932 52.0
Gorai.008G144800 Gossypium raimondii HOM05D000880 ORTHO05D004760 8.2e-235 817.8 911 57.4
Gohir.D12G133800 Gossypium hirsutum HOM05D000880 ORTHO05D004760 1.1e-234 817.4 911 57.1
Atru.chr3.2809 Acer truncatum HOM05D000880 ORTHO05D004760 1.4e-234 817.0 919 53.3
Nn3g21505 Nelumbo nucifera HOM05D000880 ORTHO05D004760 2.0e-233 813.1 865 56.6
Gohir.A12G130000 Gossypium hirsutum HOM05D000880 ORTHO05D004760 6.5e-232 808.1 911 55.1
MD11G1308900 Malus domestica HOM05D000880 ORTHO05D004760 2.1e-230 803.1 900 55.8
Potri.002G203700 Populus trichocarpa HOM05D000880 ORTHO05D004760 1.5e-228 797.0 886 54.4
Hund25319 Selenicereus undatus HOM05D000880 ORTHO05D004760 5.7e-228 795.0 910 53.3
CsaV3_7G029310 Cucumis sativus L. HOM05D000880 ORTHO05D004760 8.2e-227 791.2 906 53.2
Cc01_g20920 Coffea canephora HOM05D000880 ORTHO05D004760 1.8e-226 790.0 904 52.4
MD03G1289000 Malus domestica HOM05D000880 ORTHO05D004760 1.8e-226 790.0 919 56.3
Potri.014G128300 Populus trichocarpa HOM05D000880 ORTHO05D004760 4.1e-226 788.9 887 52.8
CSS0022271 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D004760 1.5e-225 786.9 884 52.3
ClCG09G005830 Citrullus lanatus HOM05D000880 ORTHO05D004760 2.6e-225 786.2 907 52.5
Sc04g0008900 Simmondsia chinensis HOM05D000880 ORTHO05D004760 1.3e-224 783.9 922 55.1
MELO3C015997.2 Cucumis melo HOM05D000880 ORTHO05D004760 3.8e-224 782.3 908 52.6
Cpa.g.sc229.11 Carica papaya HOM05D000880 ORTHO05D004760 8.5e-224 781.2 938 52.6
Sabra02G0155400 Salix brachista HOM05D000880 ORTHO05D004760 2.1e-222 776.5 898 55.0
Nitab4.5_0002995g0010 Nicotiana tabacum HOM05D000880 ORTHO05D004760 6.1e-222 775.0 903 52.5
Sed0027832 Sechium edule HOM05D000880 ORTHO05D004760 1.0e-221 774.2 911 52.4
Migut.C01322 Erythranthe guttata HOM05D000880 ORTHO05D004760 1.6e-217 760.4 906 51.5
TWI14G0456 Tripterygium wilfordii HOM05D000880 ORTHO05D004760 5.9e-217 758.4 921 53.3
Aqoxy2G02932 Aquilegia oxysepala HOM05D000880 ORTHO05D004760 2.9e-216 756.1 907 50.2
PGSC0003DMG400023908 Solanum tuberosum HOM05D000880 ORTHO05D004760 8.5e-216 754.6 900 53.0
Solyc09g005760.3 Solanum lycopersicum HOM05D000880 ORTHO05D004760 1.9e-215 753.4 899 53.4
RcHm_v2.0_Chr6g0294141 Rosa chinensis HOM05D000880 ORTHO05D004760 1.6e-214 750.4 911 50.4
SalBow7G4572 Salvia bowleyana HOM05D000880 ORTHO05D004760 3.6e-214 749.2 887 51.3
COL.COLO4_23336 Corchorus olitorius HOM05D000880 ORTHO05D004760 1.8e-213 746.9 901 50.7
Sed0021307 Sechium edule HOM05D000880 ORTHO05D004760 3.0e-213 746.1 878 51.6
CAN.G125.1 Capsicum annuum HOM05D000880 ORTHO05D004760 2.6e-212 743.0 901 52.5
Sopen09g001650 Solanum pennellii HOM05D000880 ORTHO05D004760 3.7e-211 739.2 917 52.0
SalBow5G3782 Salvia bowleyana HOM05D000880 ORTHO05D004760 1.4e-210 737.3 893 50.4
Peaxi162Scf00039g00620 Petunia axillaris HOM05D000880 ORTHO05D004760 1.8e-210 736.9 812 54.2
DCAR_015239 Daucus carota HOM05D000880 ORTHO05D004760 4.1e-210 735.7 846 53.1
PSO675G6830 Papaver somniferum HOM05D000880 ORTHO05D004760 7.0e-210 734.9 921 50.5
FAN27G2693 Fragaria x ananassa HOM05D000880 ORTHO05D004760 1.2e-209 734.2 888 50.2
FAN20G0148 Fragaria x ananassa HOM05D000880 ORTHO05D007053 2.0e-209 733.4 911 49.4
PSO541G5609 Papaver somniferum HOM05D000880 ORTHO05D004760 2.5e-207 726.5 928 48.4
vmacro15153 Vaccinium macrocarpon HOM05D000880 ORTHO05D004760 1.6e-206 723.8 862 51.2
FAN24G3174 Fragaria x ananassa HOM05D000880 ORTHO05D007053 2.7e-206 723.0 905 49.4
SGA_v2.0_scaffold24G10608 Striga asiatica HOM05D000880 ORTHO05D004760 8.0e-206 721.5 898 50.0
THA.LOC104801276 Tarenaya hassleriana HOM05D000880 ORTHO05D004760 4.4e-204 715.7 875 49.6
FAN15G1023 Fragaria x ananassa HOM05D000880 ORTHO05D007053 1.8e-202 710.3 888 49.1
AUR62026599 Chenopodium quinoa HOM05D000880 ORTHO05D004760 9.1e-202 708.0 927 46.8
EL10Ac9g22871 Beta vulgaris HOM05D000880 ORTHO05D004760 2.7e-201 706.4 819 52.4
Ah.07g202710 Amaranthus hybridus HOM05D000880 ORTHO05D004760 3.8e-200 702.6 895 50.2
Sp6g02280 Schrenkiella parvula HOM05D000880 ORTHO05D004760 3.8e-200 702.6 882 50.7
Rhsim01G0285600 Rhododendron simsii HOM05D000880 ORTHO05D004760 8.6e-200 701.4 861 49.5
MSTRG.25483 Avicennia marina HOM05D000880 ORTHO05D004760 1.1e-199 701.0 732 54.2
FvH4_2g25830 Fragaria vesca HOM05D000880 ORTHO05D004760 3.2e-199 699.5 851 49.9
CARHR250590 Cardamine hirsuta HOM05D000880 ORTHO05D004760 1.2e-198 697.6 879 50.7
Lsat_1_v5_gn_5_191521 Lactuca sativa HOM05D000880 ORTHO05D004760 1.2e-198 697.6 861 51.3
Rhsim11G0035900 Rhododendron simsii HOM05D000880 ORTHO05D004760 3.6e-198 696.0 861 49.2
AL6G50720 Arabidopsis lyrata HOM05D000880 ORTHO05D004760 2.6e-196 689.9 877 49.0
Os03g0343300 Oryza sativa ssp. japonica HOM05D000880 ORTHO05D004760 2.6e-196 689.9 880 49.7
Aa31LG5G2040 Aethionema arabicum HOM05D000880 ORTHO05D004760 1.1e-194 684.5 885 48.0
Carub.0006s3476 Capsella rubella HOM05D000880 ORTHO05D004760 7.8e-193 678.3 878 48.9
HanXRQChr01g0001311 Helianthus annuus HOM05D000880 ORTHO05D004760 1.7e-192 677.2 869 50.2
AT4G02400 Arabidopsis thaliana HOM05D000880 ORTHO05D004760 6.6e-192 675.2 888 48.3
Hma1.2p1_1471F.1_g285620 Hydrangea macrophylla HOM05D000880 ORTHO05D004760 5.6e-191 672.2 770 51.2
Thhalv10028424m.g Eutrema salsugineum HOM05D000880 ORTHO05D004760 7.5e-188 661.8 877 48.0
Zm00001eb016440 Zea mays HOM05D000880 ORTHO05D004760 1.7e-187 660.6 871 49.5
AUR62005314 Chenopodium quinoa HOM05D000880 ORTHO05D004760 4.3e-183 646.0 922 44.0
BcaC03g16120 Brassica carinata HOM05D000880 ORTHO05D004760 7.3e-183 645.2 885 47.5
HPP92_011847 Vanilla planifolia HOM05D000880 ORTHO05D004760 2.8e-182 643.3 882 45.8
ECA248G0121 Erigeron canadensis HOM05D000880 ORTHO05D004760 2.2e-179 633.6 872 47.0
A02p24660 Brassica napus HOM05D000880 ORTHO05D004760 8.3e-179 631.7 889 46.8
unitig_747.g21560 Utricularia gibba HOM05D000880 ORTHO05D004760 5.4e-178 629.0 875 47.2
BcaB05g23626 Brassica carinata HOM05D000880 ORTHO05D004760 5.0e-176 622.5 884 46.2
BolC2t09905H Brassica oleracea HOM05D000880 ORTHO05D004760 9.5e-175 618.2 910 45.7
Oeu028138.2 Olea europaea HOM05D000880 ORTHO05D004760 9.5e-175 618.2 811 47.3
C02p38920 Brassica napus HOM05D000880 ORTHO05D004760 2.8e-174 616.7 897 46.0
ATR0100G058 Amborella trichopoda HOM05D000880 ORTHO05D004760 1.2e-172 611.3 891 44.2
Medtr7g091790 Medicago truncatula HOM05D000880 ORTHO05D004760 2.0e-172 610.5 843 49.9
PSO478G4138 Papaver somniferum HOM05D000880 ORTHO05D004760 7.5e-172 608.6 757 48.9
Nitab4.5_0004207g0040 Nicotiana tabacum HOM05D000880 ORTHO05D004760 3.7e-171 606.3 902 44.6
Carub.0006s0757 Capsella rubella HOM05D000880 ORTHO05D004760 2.1e-169 600.5 863 44.7
BraA02t07457Z Brassica rapa HOM05D000880 ORTHO05D004760 1.8e-165 587.4 913 44.1
AL6G19330 Arabidopsis lyrata HOM05D000880 ORTHO05D004760 2.9e-163 580.1 867 43.1
AT5G08600 Arabidopsis thaliana HOM05D000880 ORTHO05D004760 1.5e-159 567.8 882 43.0
Thhalv10015339m.g Eutrema salsugineum HOM05D000880 ORTHO05D004760 5.6e-159 565.8 831 44.2
Nitab4.5_0007049g0030 Nicotiana tabacum HOM05D000880 ORTHO05D004760 8.4e-155 552.0 612 51.8
Actinidia26752 Actinidia chinensis HOM05D000880 ORTHO05D004760 1.6e-153 547.7 571 55.0
Prupe.8G262300 Prunus persica HOM05D000880 ORTHO05D004760 5.6e-151 539.3 654 53.1
VMungo1383G0181 Vigna mungo HOM05D000880 ORTHO05D004760 4.8e-150 536.2 433 67.2
A09p01860 Brassica napus HOM05D000880 ORTHO05D004760 9.9e-148 528.5 875 42.7
BcaNung04048 Brassica carinata HOM05D000880 ORTHO05D004760 6.0e-145 519.2 882 42.4
Atru.chr5.2474 Acer truncatum HOM05D000880 ORTHO05D004760 4.8e-142 509.6 642 49.2
SEGI_18392 Sequoiadendron giganteum HOM05D000880 ORTHO05D004760 4.6e-137 493.0 1074 38.2
CDE05G0797 Ceratophyllum demersum HOM05D000880 ORTHO05D004760 1.1e-135 488.4 871 39.8
Medtr8g058740 Medicago truncatula HOM05D000880 ORTHO05D004760 3.8e-123 446.8 344 72.7
MBI19_g43564_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D004760 3.4e-116 423.7 405 58.8
BcaB01g02051 Brassica carinata HOM05D000880 ORTHO05D004760 3.7e-110 403.7 762 38.5
SMO146G0364 Selaginella moellendorffii HOM05D000880 ORTHO05D004760 2.8e-102 377.5 932 34.5
PSO541G3373 Papaver somniferum HOM05D000880 ORTHO05D004760 4.5e-100 370.2 455 49.9
Mapoly0012s0035 Marchantia polymorpha HOM05D000880 ORTHO05D004760 5.5e-98 363.2 1040 32.3
TAR633G1122 Trochodendron aralioides HOM05D000880 ORTHO05D004760 2.1e-89 334.7 250 66.8
TAR636G2791 Trochodendron aralioides HOM05D000880 ORTHO05D004760 5.7e-87 326.6 280 61.4
Pp3c9_17240 Physcomitrium patens HOM05D000880 ORTHO05D004760 2.2e-86 324.7 986 33.7
VMungo1383G0715 Vigna mungo HOM05D000880 ORTHO05D004760 6.6e-83 313.2 208 78.8
C09p01900 Brassica napus HOM05D000880 ORTHO05D004760 4.7e-81 307.0 873 31.8
BolC9t53125H Brassica oleracea HOM05D000880 ORTHO05D004760 4.7e-81 307.0 873 31.8
PGR003G0015 Punica granatum HOM05D000880 ORTHO05D004760 8.0e-81 306.2 340 50.3
AagrBONN_evm.TU.Sc2ySwM_117.3282 Anthoceros agrestis HOM05D000880 ORTHO05D004760 2.0e-79 301.6 943 32.2
PSO782G1438 Papaver somniferum HOM05D000880 ORTHO05D004760 7.5e-79 299.7 612 36.6
MSTRG.25474 Avicennia marina HOM05D000880 ORTHO05D004760 1.4e-69 268.9 219 63.9
PSO210G4167 Papaver somniferum HOM05D000880 ORTHO05D004760 7.5e-63 246.5 335 44.2
CBR_g19437 Chara braunii HOM05D000880 ORTHO05D004760 1.7e-62 245.4 975 27.5
MCO13G364 Micromonas commoda HOM05D000880 ORTHO05D004760 2.2e-54 218.4 732 30.2
Oeu000538.1 Olea europaea HOM05D000880 ORTHO05D004760 5.1e-51 207.2 464 33.8
BolC4t25292H Brassica oleracea HOM05D000880 ORTHO05D004760 4.3e-50 204.1 406 38.4
BcaC02g09729 Brassica carinata HOM05D000880 ORTHO05D004760 2.1e-49 201.8 406 37.9
C02p30160 Brassica napus HOM05D000880 ORTHO05D004760 2.8e-49 201.4 414 37.4
BcaC07g42028 Brassica carinata HOM05D000880 ORTHO05D004760 8.1e-49 199.9 424 37.7
PRCOL_00002788 Prasinoderma coloniale HOM05D000880 ORTHO05D004760 9.9e-47 193.0 733 27.3
TAR627G0201 Trochodendron aralioides HOM05D000880 ORTHO05D004760 1.1e-45 189.5 316 44.9
BcaC06g34728 Brassica carinata HOM05D000880 ORTHO05D004760 1.4e-45 189.1 365 37.0
SEGI_12067 Sequoiadendron giganteum HOM05D000880 ORTHO05D004760 1.5e-42 179.1 217 47.9
C08p50820 Brassica napus HOM05D000880 ORTHO05D004760 3.3e-42 177.9 407 36.9
CAN.G1465.7 Capsicum annuum HOM05D000880 ORTHO05D004760 2.4e-40 171.8 160 58.8
SEGI_30897 Sequoiadendron giganteum HOM05D000880 ORTHO05D004760 3.4e-39 167.9 187 50.3
BcaC08g44566 Brassica carinata HOM05D000880 ORTHO05D004760 6.0e-36 157.1 367 34.1
Cfa026849 Carpinus fangiana HOM05D000880 ORTHO05D004760 1.3e-33 149.4 695 25.2
BolC8t52610H Brassica oleracea HOM05D000880 ORTHO05D004760 2.4e-32 145.2 312 37.2
Gorai.008G145900 Gossypium raimondii HOM05D000880 ORTHO05D004760 2.4e-32 145.2 177 50.3
Gohir.D12G134950 Gossypium hirsutum HOM05D000880 ORTHO05D004760 9.9e-31 139.8 175 55.4
SMO146G0006 Selaginella moellendorffii HOM05D000880 ORTHO05D004760 2.9e-30 138.3 198 41.9
BcaC03g15404 Brassica carinata HOM05D000880 ORTHO05D001048 8.4e-30 136.7 312 34.0
CAN.G1018.15 Capsicum annuum HOM05D000880 ORTHO05D004760 1.2e-28 132.9 137 48.9
Cre11.g478966 Chlamydomonas reinhardtii HOM05D000880 ORTHO05D004760 9.6e-26 123.2 187 39.0
A04p15040 Brassica napus HOM05D000880 ORTHO05D004760 2.8e-25 121.7 310 32.6
A10p23840 Brassica napus HOM05D000880 ORTHO05D004760 4.8e-25 120.9 210 40.0
Cre11.g478950 Chlamydomonas reinhardtii HOM05D000880 ORTHO05D004760 4.8e-25 120.9 1000 23.9
BraA04t17148Z Brassica rapa HOM05D000880 ORTHO05D004760 1.8e-24 119.0 310 32.3
A09p11280 Brassica napus HOM05D000880 ORTHO05D004760 2.4e-24 118.6 280 35.0
A04p00500 Brassica napus HOM05D000880 ORTHO05D004760 2.0e-23 115.5 280 34.6
C07p40760 Brassica napus HOM05D000880 ORTHO05D004760 4.5e-23 114.4 165 44.8
Gohir.A12G131050 Gossypium hirsutum HOM05D000880 ORTHO05D004760 5.3e-16 90.9 128 46.9
SEGI_39037 Sequoiadendron giganteum HOM05D000880 ORTHO05D004760 2.0e-15 89.0 122 56.6
Actinidia21043 Actinidia chinensis HOM05D000203 ORTHO05D000135 6.7e-11 73.9 216 28.7
CAN.G1015.4 Capsicum annuum HOM05D004625 ORTHO05D006054 2.5e-10 72.0 83 49.4
CAN.G619.12 Capsicum annuum HOM05D000880 ORTHO05D004760 1.3e-09 69.7 92 45.7
CAN.G1465.8 Capsicum annuum HOM05D000880 ORTHO05D004760 4.8e-09 67.8 65 55.4
AT5G36980 Arabidopsis thaliana HOM05D000880 ORTHO05D004760 6.9e-08 63.9 182 33.0


User provided reference genes

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