Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 0.0e+00 1475.7 746 100.0
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 0.0e+00 1266.5 800 81.5
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 0.0e+00 1231.1 800 80.0
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 0.0e+00 1178.3 801 76.9
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 0.0e+00 1128.6 800 74.1
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 0.0e+00 1103.2 800 72.2
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 0.0e+00 1077.8 801 70.8
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 1.5e-309 1065.8 802 70.0
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 8.3e-297 1023.5 824 66.7
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 8.6e-294 1013.4 830 66.1
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 3.6e-247 858.6 674 68.1
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 3.9e-246 855.1 803 56.3
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 2.0e-242 842.8 799 55.7
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 1.1e-240 837.0 804 56.7
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 7.2e-232 807.7 778 56.6
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 4.4e-229 798.5 805 54.3
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 1.3e-225 786.9 779 53.9
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 2.5e-224 782.7 802 53.1
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 2.5e-224 782.7 800 54.8
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 5.5e-224 781.6 802 53.0
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 2.7e-223 779.2 805 51.8
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 1.8e-219 766.5 802 53.4
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 1.6e-215 753.4 801 50.3
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 2.3e-209 733.0 802 51.9
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 5.6e-208 728.4 769 53.1
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 2.6e-205 719.5 743 52.6
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 3.9e-201 705.7 791 47.4
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 3.5e-194 682.6 898 45.3
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 3.5e-194 682.6 797 47.9
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 2.5e-192 676.4 802 47.6
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 4.3e-192 675.6 812 47.7
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 2.8e-191 672.9 814 46.8
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 2.0e-189 666.8 802 47.4
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 4.4e-189 665.6 802 47.9
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 9.8e-189 664.5 805 46.3
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 6.4e-188 661.8 813 45.4
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 1.1e-187 661.0 801 47.8
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 2.4e-187 659.8 806 45.9
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 2.1e-186 656.8 810 45.6
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 6.6e-185 651.7 805 45.8
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 1.9e-184 650.2 794 48.0
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 9.5e-184 647.9 661 53.6
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 2.8e-183 646.4 790 45.3
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 6.2e-183 645.2 789 45.6
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 2.2e-180 636.7 790 45.2
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 2.9e-180 636.3 791 45.4
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 3.5e-178 629.4 807 46.0
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 1.7e-177 627.1 806 46.2
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 2.1e-175 620.2 803 43.8
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 2.1e-175 620.2 803 43.7
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 1.8e-174 617.1 822 43.2
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 5.2e-174 615.5 833 43.6
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 9.9e-173 611.3 776 46.1
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 3.8e-172 609.4 801 43.3
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 4.3e-168 595.9 739 46.1
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 2.6e-165 586.6 786 43.9
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 4.4e-165 585.9 821 43.2
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 2.2e-164 583.6 800 43.8
Atru.chr8.1601 Acer truncatum HOM05D006439 ORTHO05D008152 8.4e-156 555.1 431 64.5
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 3.5e-154 549.7 642 47.7
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 2.3e-153 547.0 672 45.8
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 4.8e-151 539.3 748 44.4
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 1.6e-146 524.2 658 45.3
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 2.4e-142 510.4 731 42.4
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 6.9e-142 508.8 656 46.0
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 1.9e-139 500.7 654 45.1
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 4.6e-138 496.1 780 40.5
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 3.2e-131 473.4 794 38.0
TAR623G1631 Trochodendron aralioides HOM05D006439 ORTHO05D008152 4.6e-130 469.5 536 49.8
Dinv21235 Davidia involucrata HOM05D000103 ORTHO05D008152 1.4e-123 448.0 386 60.6
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 5.5e-123 446.0 578 45.8
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 6.1e-122 442.6 800 37.2
Carub.0004s1817 Capsella rubella HOM05D006439 ORTHO05D008152 1.8e-121 441.0 434 55.3
Rhsim04G0133900 Rhododendron simsii HOM05D006439 ORTHO05D008152 1.4e-118 431.4 347 61.7
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 9.1e-118 428.7 801 35.5
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 1.7e-111 407.9 773 35.6
CSS0038647 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 9.1e-102 375.6 290 63.1
MBI17_g23163_MAGBIO Magnolia biondii HOM05D006439 ORTHO05D008152 1.2e-88 332.0 691 35.3
Zm00001eb139990 Zea mays HOM05D006439 ORTHO05D008152 1.0e-84 318.9 616 35.9
Atru.chr8.1600 Acer truncatum HOM05D006439 ORTHO05D008152 1.5e-83 315.1 316 51.9
Lj3A1001T30 Lonicera japonica HOM05D006439 ORTHO05D008152 5.6e-75 286.6 245 61.2
QL11p044009 Quercus lobata HOM05D006439 ORTHO05D009270 5.2e-73 280.0 350 44.9
QL07p039868 Quercus lobata HOM05D006439 ORTHO05D008152 2.2e-63 248.1 198 63.6
Ciclev10013912m.g Citrus clementina HOM05D006439 ORTHO05D008152 7.8e-61 239.6 175 68.0
Pp3c16_1040 Physcomitrium patens HOM05D006439 ORTHO05D008152 1.0e-60 239.2 788 29.1
VMungo1127G2301 Vigna mungo HOM05D006439 ORTHO05D008152 6.6e-60 236.5 238 58.4
Nitab4.5_0005447g0020 Nicotiana tabacum HOM05D006439 ORTHO05D008152 4.7e-58 230.3 316 42.1
PGSC0003DMG402008399 Solanum tuberosum HOM05D006439 ORTHO05D008152 6.9e-57 226.5 173 61.3
Dinv21234 Davidia involucrata HOM05D006439 ORTHO05D008152 4.8e-50 203.8 248 46.4
Mapoly0116s0006 Marchantia polymorpha HOM05D006439 ORTHO05D008152 1.8e-49 201.8 795 25.8
SMO238G0046 Selaginella moellendorffii HOM05D006439 ORTHO05D008152 9.9e-48 196.1 643 27.5
AagrBONN_evm.TU.Sc2ySwM_117.1948 Anthoceros agrestis HOM05D006439 ORTHO05D008152 3.8e-47 194.1 694 29.0
SEGI_26522 Sequoiadendron giganteum HOM05D006439 ORTHO05D000001 9.6e-43 179.5 221 45.2
Carub.0004s1816 Capsella rubella HOM05D006439 ORTHO05D008152 6.2e-42 176.8 235 39.6
CAN.G1099.8 Capsicum annuum HOM05D006439 ORTHO05D008152 6.0e-37 160.2 130 58.5
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 7.9e-37 159.8 336 33.9
Nitab4.5_0000381g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.5e-35 155.6 125 60.8
SEGI_37059 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 6.9e-33 146.7 137 54.0
FAN09G3024 Fragaria x ananassa HOM05D006439 ORTHO05D008152 2.0e-32 145.2 213 43.7
CSS0030357 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 2.2e-31 141.7 174 44.8
Lj3A1001T31 Lonicera japonica HOM05D006439 ORTHO05D008152 1.9e-30 138.7 98 66.3
AUR62028586 Chenopodium quinoa HOM05D006439 ORTHO05D008152 3.1e-25 121.3 97 56.7
Lj3A1001G26 Lonicera japonica HOM05D006439 ORTHO05D008152 5.3e-25 120.6 135 49.6
Thecc.10G111400 Theobroma cacao HOM05D006439 ORTHO05D008152 2.7e-21 108.2 76 65.8
VMungo1383G1144 Vigna mungo HOM05D006439 ORTHO05D008152 3.3e-19 101.3 68 72.1
SEGI_02684 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.3e-18 99.4 102 48.0
Psat6g076200 Pisum sativum HOM05D006439 ORTHO05D008152 3.8e-15 87.8 67 59.7
AUR62033535 Chenopodium quinoa HOM05D006439 ORTHO05D008152 8.5e-15 86.7 87 46.0
SEGI_31112 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 4.2e-14 84.3 296 28.0
CSS0035414 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 8.2e-10 70.1 65 52.3
ECA232G2349 Erigeron canadensis HOM05D006439 ORTHO05D008321 6.9e-09 67.0 236 26.7
CSS0045256 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 1.5e-08 65.9 69 50.7


User provided reference genes

Program Settings