Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 8.3e-282 973.0 476 100.0
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 1.4e-268 929.1 475 94.7
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 1.2e-267 926.0 475 93.9
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 2.9e-263 911.4 477 92.5
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 7.0e-257 890.2 475 89.7
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 1.6e-256 889.0 475 90.1
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 6.8e-252 873.6 475 88.2
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 2.3e-247 858.6 475 86.9
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 4.3e-246 854.4 475 86.9
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 2.1e-245 852.0 475 86.5
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 1.2e-243 846.3 475 85.3
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 5.8e-243 844.0 475 85.3
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 1.4e-225 786.2 481 79.4
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 3.2e-225 785.0 481 79.8
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 7.1e-225 783.9 483 79.1
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 1.6e-224 782.7 481 78.2
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 1.6e-224 782.7 481 79.0
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 2.7e-224 781.9 477 78.4
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 2.7e-224 781.9 481 78.6
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 4.6e-224 781.2 481 78.8
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 7.9e-224 780.4 481 78.0
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 1.3e-223 779.6 481 78.8
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 1.3e-223 779.6 481 77.5
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 2.3e-223 778.9 481 78.6
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 3.9e-223 778.1 482 78.8
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 6.6e-223 777.3 481 78.4
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 8.7e-223 776.9 481 78.2
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 1.9e-222 775.8 481 78.2
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 1.9e-222 775.8 483 78.3
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 3.3e-222 775.0 480 77.7
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 3.3e-222 775.0 481 77.5
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 3.3e-222 775.0 481 78.0
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 4.3e-222 774.6 481 78.0
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 4.3e-222 774.6 483 78.1
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 1.6e-221 772.7 481 78.4
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 3.6e-221 771.5 481 78.6
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 4.8e-221 771.2 481 78.4
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 4.8e-221 771.2 481 77.8
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 4.8e-221 771.2 483 78.1
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 4.8e-221 771.2 481 77.3
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 1.4e-220 769.6 481 77.8
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 2.4e-220 768.8 481 77.3
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 2.4e-220 768.8 483 77.8
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 2.4e-220 768.8 475 77.9
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 4.0e-220 768.1 481 76.9
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 6.9e-220 767.3 483 77.2
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 6.9e-220 767.3 481 78.0
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 9.0e-220 766.9 481 78.4
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.2e-219 766.5 481 78.0
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.2e-219 766.5 481 78.4
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 1.5e-219 766.1 481 78.2
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.5e-219 766.1 480 76.2
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 2.0e-219 765.8 482 76.8
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 2.0e-219 765.8 481 78.4
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 2.0e-219 765.8 479 77.5
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 3.4e-219 765.0 479 78.1
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 3.4e-219 765.0 481 76.9
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 5.8e-219 764.2 481 77.8
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 5.8e-219 764.2 481 77.8
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 5.8e-219 764.2 481 78.0
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 7.6e-219 763.8 477 78.4
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 9.9e-219 763.5 479 77.7
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 9.9e-219 763.5 512 73.0
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 1.3e-218 763.1 481 77.1
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 1.9e-217 759.2 481 76.3
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 2.4e-217 758.8 480 75.6
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 5.5e-217 757.7 477 77.6
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 5.5e-217 757.7 487 76.0
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 9.3e-217 756.9 481 76.7
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 1.6e-216 756.1 479 77.2
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 1.6e-216 756.1 481 77.1
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 4.6e-216 754.6 477 76.7
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.0e-215 753.4 480 74.8
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 1.0e-215 753.4 431 82.1
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 1.3e-215 753.1 483 76.6
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.8e-215 752.7 481 77.1
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.0e-215 751.9 481 77.1
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 8.7e-215 750.4 479 76.2
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 8.7e-215 750.4 479 76.2
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 8.7e-215 750.4 487 75.6
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 3.3e-214 748.4 418 84.7
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 3.3e-214 748.4 480 76.5
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 8.1e-213 743.8 475 75.8
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 1.8e-212 742.7 479 76.0
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 3.1e-212 741.9 478 76.6
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 4.0e-212 741.5 480 75.6
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 6.9e-212 740.7 427 82.0
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 3.4e-211 738.4 479 75.8
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 5.8e-211 737.6 477 75.7
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 1.7e-210 736.1 483 74.1
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 2.2e-210 735.7 479 74.9
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 3.2e-209 731.9 478 75.3
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 3.2e-209 731.9 482 74.3
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 3.2e-209 731.9 479 74.5
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 1.2e-208 729.9 476 75.4
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 2.1e-208 729.2 478 74.9
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 2.4e-204 715.7 389 85.9
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 4.2e-201 704.9 477 73.0
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 1.1e-198 696.8 484 71.9
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 1.1e-193 680.2 441 71.7
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 4.2e-193 678.3 480 70.8
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 7.2e-193 677.6 443 74.5
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 5.1e-191 671.4 415 76.4
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 6.3e-189 664.5 391 78.3
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 3.4e-187 658.7 398 77.1
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 7.7e-187 657.5 389 77.4
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 2.5e-177 625.9 384 78.6
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 6.1e-176 621.3 390 74.4
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.5e-170 601.3 431 71.0
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 4.8e-165 585.1 388 67.3
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 1.0e-162 577.4 480 63.1
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 2.5e-161 572.8 395 65.6
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 2.3e-151 539.7 286 87.8
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 2.6e-150 536.2 286 87.8
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.4e-140 503.8 339 73.2
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 7.3e-137 491.5 298 76.8
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 5.3e-103 379.0 237 77.2
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 2.6e-102 376.7 272 68.8
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 2.8e-80 303.5 171 80.7
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.0e-62 244.2 196 62.8
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 3.0e-58 230.3 130 83.1
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 2.8e-56 223.8 136 75.7
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.5e-54 216.5 132 76.5
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 5.0e-45 186.4 140 67.1
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 3.8e-37 160.2 158 56.3
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 1.7e-32 144.8 93 75.3
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 3.0e-29 134.0 105 61.0
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 1.1e-12 79.0 59 62.7
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 8.1e-11 72.8 284 26.1
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 4.4e-09 67.0 156 29.5
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 1.7e-08 65.1 128 33.6
PSO782G1764 Papaver somniferum HOM05D000776 ORTHO05D001624 8.4e-08 62.8 174 27.6
PSO478G2983 Papaver somniferum HOM05D000776 ORTHO05D001624 1.1e-07 62.4 174 27.0
Migut.E01129 Erythranthe guttata HOM05D000776 ORTHO05D001624 1.4e-07 62.0 154 28.6
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 1.4e-07 62.0 138 30.4
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 1.9e-07 61.6 161 26.7
TPR.G12967 Trifolium pratense HOM05D000776 ORTHO05D001624 1.9e-07 61.6 165 27.9
BraA01t02620Z Brassica rapa HOM05D000776 ORTHO05D001624 4.1e-07 60.5 156 25.6
Sc01g0008640 Simmondsia chinensis HOM05D000776 ORTHO05D001624 4.1e-07 60.5 159 26.4
Lalb_Chr16g0390661 Lupinus albus HOM05D000776 ORTHO05D001624 5.4e-07 60.1 155 29.7
Pp3c4_23720 Physcomitrium patens HOM05D000739 ORTHO05D001171 5.4e-07 60.1 326 25.2
Psat7g036120 Pisum sativum HOM05D000776 ORTHO05D001624 5.4e-07 60.1 130 27.7
PGR004G2387 Punica granatum HOM05D000739 ORTHO05D001171 5.4e-07 60.1 356 23.9
Pp3c10_11740 Physcomitrium patens HOM05D000739 ORTHO05D001171 1.2e-06 58.9 323 24.5
CSS0022914 Camellia sinensis var. sinensis HOM05D000776 ORTHO05D001624 1.6e-06 58.5 174 27.6
RcHm_v2.0_Chr3g0467761 Rosa chinensis HOM05D000739 ORTHO05D001171 1.6e-06 58.5 337 23.1
Lalb_Chr05g0224991 Lupinus albus HOM05D000776 ORTHO05D001624 2.1e-06 58.2 156 27.6
CiPaw.11G120200 Carya illinoinensis HOM05D000776 ORTHO05D001624 6.0e-06 56.6 131 29.0
Haze_27503 Corylus avellana HOM05D000776 ORTHO05D002281 6.0e-06 56.6 159 28.9
FAN08G0150 Fragaria x ananassa HOM05D000776 ORTHO05D001624 6.0e-06 56.6 128 28.9


User provided reference genes

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