Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07697_v3 Cicer arietinum L. HOM05D006201 ORTHO05D007178 0.0e+00 1340.9 691 100.0
Psat3g124360 Pisum sativum HOM05D006201 ORTHO05D007178 1.4e-298 1029.2 724 77.2
TPR.G6637 Trifolium pratense HOM05D006201 ORTHO05D007178 2.5e-295 1018.5 724 75.8
Medtr7g070280 Medicago truncatula HOM05D006201 ORTHO05D007178 6.2e-262 907.5 720 70.1
Lj1g0025030 Lotus japonicus HOM05D006201 ORTHO05D007178 1.0e-248 863.6 731 67.2
VMungo1383G1579 Vigna mungo HOM05D006201 ORTHO05D007178 1.6e-230 803.1 716 63.0
Lalb_Chr01g0023361 Lupinus albus HOM05D006201 ORTHO05D007178 2.4e-229 799.3 704 62.9
Glyma.07G156700 Glycine max HOM05D006201 ORTHO05D007178 1.3e-224 783.5 719 62.2
arahy.Tifrunner.gnm1.ann1.0N3F9M Arachis hypogaea HOM05D006201 ORTHO05D007178 7.7e-188 661.4 750 50.7
arahy.Tifrunner.gnm1.ann1.WUZ318 Arachis hypogaea HOM05D006201 ORTHO05D007178 7.2e-186 654.8 750 50.1
QL07p033902 Quercus lobata HOM05D006201 ORTHO05D007178 2.6e-175 619.8 758 49.2
Cfa017112 Carpinus fangiana HOM05D006201 ORTHO05D007178 1.7e-174 617.1 726 49.4
CiPaw.09G215500 Carya illinoinensis HOM05D006201 ORTHO05D007178 2.9e-171 606.3 738 47.8
Phvul.008G092200 Phaseolus vulgaris HOM05D006201 ORTHO05D007178 3.3e-170 602.8 479 68.1
Haze_21088 Corylus avellana HOM05D006201 ORTHO05D007178 4.4e-167 592.4 756 46.8
Prupe.6G285000 Prunus persica HOM05D006201 ORTHO05D007178 5.8e-167 592.0 737 47.4
FAN05G0393 Fragaria x ananassa HOM05D006201 ORTHO05D007178 2.7e-164 583.2 714 47.5
FAN05G0066 Fragaria x ananassa HOM05D006201 ORTHO05D007178 6.0e-164 582.0 714 47.9
MD04G1166800 Malus domestica HOM05D006201 ORTHO05D007178 7.3e-162 575.1 727 46.6
CANSAT35G1627 Cannabis sativa HOM05D006201 ORTHO05D007178 1.5e-159 567.4 733 45.8
Manes.09G111900 Manihot esculenta HOM05D006201 ORTHO05D007178 6.4e-158 562.0 732 45.1
Thecc.05G006600 Theobroma cacao HOM05D006201 ORTHO05D007178 3.0e-155 553.1 731 45.1
Ciclev10024812m.g Citrus clementina HOM05D006201 ORTHO05D007178 5.8e-151 538.9 724 45.7
FAN14G5119 Fragaria x ananassa HOM05D006201 ORTHO05D007178 7.5e-151 538.5 756 43.9
TWI77G1003 Tripterygium wilfordii HOM05D006201 ORTHO05D007178 7.5e-151 538.5 734 45.0
ClCG03G002510 Citrullus lanatus HOM05D006201 ORTHO05D007178 2.9e-150 536.6 600 49.5
Sabra16G0130900 Salix brachista HOM05D006201 ORTHO05D007178 3.2e-149 533.1 726 44.4
PGR004G1794 Punica granatum HOM05D006201 ORTHO05D007178 1.6e-148 530.8 734 44.3
COL.COLO4_14449 Corchorus olitorius HOM05D006201 ORTHO05D007178 4.6e-148 529.3 746 43.6
CsaV3_1G013180 Cucumis sativus L. HOM05D006201 ORTHO05D007178 8.6e-147 525.0 599 48.4
Gorai.012G119200 Gossypium raimondii HOM05D006201 ORTHO05D007178 2.8e-145 520.0 740 44.2
Sed0013207 Sechium edule HOM05D006201 ORTHO05D007178 3.6e-145 519.6 598 48.7
Gohir.A04G095500 Gossypium hirsutum HOM05D006201 ORTHO05D007178 4.0e-144 516.2 740 43.2
GSVIVG01030267001 Vitis vinifera HOM05D006201 ORTHO05D007178 2.0e-143 513.8 671 47.7
Actinidia11549 Actinidia chinensis HOM05D006201 ORTHO05D007178 1.7e-142 510.8 729 44.3
FAN02G1356 Fragaria x ananassa HOM05D006201 ORTHO05D007178 5.4e-141 505.8 714 43.7
Lj2C67G1 Lonicera japonica HOM05D006201 ORTHO05D007178 1.2e-140 504.6 667 45.7
CSS0012693 Camellia sinensis var. sinensis HOM05D006201 ORTHO05D007178 1.9e-138 497.3 662 45.6
Cpa.g.sc861.1 Carica papaya HOM05D006201 ORTHO05D007178 5.6e-138 495.7 737 41.5
Duzib093G1324 Durio zibethinus HOM05D006201 ORTHO05D007178 1.6e-137 494.2 732 43.3
vmacro20327 Vaccinium macrocarpon HOM05D006201 ORTHO05D007178 6.4e-134 482.3 740 42.6
MELO3C004988.2 Cucumis melo HOM05D006201 ORTHO05D007178 6.0e-132 475.7 617 45.4
HanXRQChr12g0375461 Helianthus annuus HOM05D006201 ORTHO05D007178 1.1e-130 471.5 719 41.3
MSTRG.5539 Avicennia marina HOM05D006201 ORTHO05D007178 7.3e-130 468.8 711 40.4
Rhsim05G0225800 Rhododendron simsii HOM05D006201 ORTHO05D007178 3.6e-129 466.5 733 41.9
Oeu020418.1 Olea europaea HOM05D006201 ORTHO05D007178 2.0e-127 460.7 722 41.1
PSO017G2042 Papaver somniferum HOM05D006201 ORTHO05D007178 1.3e-126 458.0 738 39.2
Sc22g0002850 Simmondsia chinensis HOM05D006201 ORTHO05D007178 5.4e-125 452.6 674 40.9
TAR623G1020 Trochodendron aralioides HOM05D006201 ORTHO05D007178 2.1e-124 450.7 586 44.9
PSO349G0155 Papaver somniferum HOM05D006201 ORTHO05D007178 4.6e-124 449.5 744 39.1
Lsat_1_v5_gn_5_149661 Lactuca sativa HOM05D006201 ORTHO05D007178 1.3e-123 448.0 712 39.7
Migut.J00094 Erythranthe guttata HOM05D006201 ORTHO05D007178 3.7e-121 439.9 665 41.2
Aqoxy1G01280 Aquilegia oxysepala HOM05D006201 ORTHO05D007178 4.8e-121 439.5 739 37.9
THA.LOC104823304 Tarenaya hassleriana HOM05D006201 ORTHO05D007178 9.0e-120 435.3 711 38.7
DCAR_023994 Daucus carota HOM05D006201 ORTHO05D007178 1.2e-119 434.9 712 38.6
Nn4g22431 Nelumbo nucifera HOM05D006201 ORTHO05D007178 2.9e-118 430.3 623 42.1
BolC5t34557H Brassica oleracea HOM05D006201 ORTHO05D007178 4.9e-118 429.5 709 37.9
EL10Ac5g12480 Beta vulgaris HOM05D006201 ORTHO05D007178 6.4e-118 429.1 715 39.0
BraA05t22910Z Brassica rapa HOM05D006201 ORTHO05D007178 8.4e-118 428.7 702 38.2
Nitab4.5_0006173g0010 Nicotiana tabacum HOM05D006201 ORTHO05D007178 8.4e-118 428.7 703 39.3
CARHR083120 Cardamine hirsuta HOM05D006201 ORTHO05D007178 1.4e-117 427.9 719 36.6
Cc06_g00730 Coffea canephora HOM05D006201 ORTHO05D007178 1.9e-117 427.6 711 39.8
C05p59050 Brassica napus HOM05D006201 ORTHO05D007178 2.4e-117 427.2 709 38.1
Nitab4.5_0003493g0040 Nicotiana tabacum HOM05D006201 ORTHO05D007178 3.2e-117 426.8 718 37.9
A05p40010 Brassica napus HOM05D006201 ORTHO05D007178 7.1e-117 425.6 702 38.3
Atru.chr8.2337 Acer truncatum HOM05D006201 ORTHO05D007178 1.6e-116 424.5 480 52.7
BcaC05g29618 Brassica carinata HOM05D006201 ORTHO05D007178 3.5e-116 423.3 695 38.6
Carub.0003s0793 Capsella rubella HOM05D006201 ORTHO05D007178 6.0e-116 422.5 729 37.0
Aa31LG5G18800 Aethionema arabicum HOM05D006201 ORTHO05D007178 3.0e-115 420.2 733 36.6
Ah.12g059100 Amaranthus hybridus HOM05D006201 ORTHO05D007178 5.1e-115 419.5 685 37.7
PGSC0003DMG400026051 Solanum tuberosum HOM05D006201 ORTHO05D007178 4.3e-114 416.4 716 38.1
AL3G19800 Arabidopsis lyrata HOM05D006201 ORTHO05D007178 2.1e-113 414.1 729 36.4
Thhalv10022535m.g Eutrema salsugineum HOM05D006201 ORTHO05D007178 6.2e-113 412.5 720 36.4
Sp3g07220 Schrenkiella parvula HOM05D006201 ORTHO05D007178 1.4e-112 411.4 732 36.3
AUR62036404 Chenopodium quinoa HOM05D006201 ORTHO05D007178 1.8e-112 411.0 685 37.7
Sopen01g036050 Solanum pennellii HOM05D006201 ORTHO05D007178 6.9e-112 409.1 716 37.6
MBI09_g02137_MAGBIO Magnolia biondii HOM05D006201 ORTHO05D007178 6.7e-107 392.5 762 37.4
FvH4_6g10600 Fragaria vesca HOM05D006201 ORTHO05D007178 4.5e-103 379.8 482 45.2
AT3G08800 Arabidopsis thaliana HOM05D006201 ORTHO05D007178 1.0e-102 378.6 541 41.2
SGA_v2.0_scaffold85G26680 Striga asiatica HOM05D006201 ORTHO05D007178 3.8e-102 376.7 735 36.6
Gohir.D04G135400 Gossypium hirsutum HOM05D006201 ORTHO05D007178 1.3e-97 361.7 510 43.9
RcHm_v2.0_Chr3g0461591 Rosa chinensis HOM05D006201 ORTHO05D007178 3.7e-97 360.1 447 46.1
Eucgr.K02944 Eucalyptus grandis HOM05D006201 ORTHO05D007178 4.2e-93 346.7 500 42.8
AUR62030757 Chenopodium quinoa HOM05D006201 ORTHO05D007178 8.8e-91 339.0 547 36.9
Dinv12170 Davidia involucrata HOM05D006201 ORTHO05D007178 1.1e-77 295.4 361 49.6
AUR62044474 Chenopodium quinoa HOM05D006201 ORTHO05D007178 1.5e-77 295.0 574 34.3
Hund14937 Selenicereus undatus HOM05D006201 ORTHO05D007178 1.2e-76 292.0 387 45.5
Solyc01g090260.5.1 Solanum lycopersicum HOM05D006201 ORTHO05D007178 9.7e-74 282.3 492 36.0
CDE04G1687 Ceratophyllum demersum HOM05D006201 ORTHO05D007178 1.8e-67 261.5 552 34.8
CAN.G1473.10 Capsicum annuum HOM05D006201 ORTHO05D007178 6.8e-67 259.6 417 37.6
unitig_578.g15909 Utricularia gibba HOM05D006201 ORTHO05D007178 3.4e-66 257.3 522 35.8
ECA248G2923 Erigeron canadensis HOM05D006201 ORTHO05D007178 1.7e-65 255.0 909 25.5
ATR0605G352 Amborella trichopoda HOM05D006201 ORTHO05D007178 5.0e-62 243.4 308 44.5
Zm00001eb012870 Zea mays HOM05D006201 ORTHO05D007178 1.5e-61 241.9 554 30.9
HPP92_025099 Vanilla planifolia HOM05D006201 ORTHO05D007178 8.0e-60 236.1 497 32.6
Dinv12171 Davidia involucrata HOM05D006201 ORTHO05D007178 1.2e-58 232.3 335 41.8
Peaxi162Scf00028g00419 Petunia axillaris HOM05D006201 ORTHO05D007178 9.2e-56 222.6 401 38.2
RcHm_v2.0_Chr3g0461601 Rosa chinensis HOM05D006201 ORTHO05D007178 2.4e-48 198.0 230 49.1
AagrBONN_evm.TU.Sc2ySwM_344.1123 Anthoceros agrestis HOM05D006201 ORTHO05D007178 7.3e-45 186.4 365 32.9
Pp3c1_35690 Physcomitrium patens HOM05D006201 ORTHO05D007178 1.2e-44 185.7 369 32.0
SEGI_17367 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 3.5e-39 167.5 224 43.8
Mapoly0011s0138 Marchantia polymorpha HOM05D006201 ORTHO05D007178 7.8e-39 166.4 347 32.0
ClCG10G022450 Citrullus lanatus HOM05D006201 ORTHO05D007178 8.9e-35 152.9 374 32.6
Potri.016G127500 Populus trichocarpa HOM05D006201 ORTHO05D007178 3.7e-33 147.5 296 33.1
Rhsim05G0226000 Rhododendron simsii HOM05D006201 ORTHO05D007178 1.7e-30 138.7 275 35.6
CANSAT64G1736 Cannabis sativa HOM05D006201 ORTHO05D007178 1.2e-28 132.5 119 60.5
CAN.G1473.9 Capsicum annuum HOM05D006201 ORTHO05D007178 1.1e-24 119.4 205 40.0
Hund14942 Selenicereus undatus HOM05D006201 ORTHO05D007178 1.2e-23 115.9 230 33.5
SMO351G0194 Selaginella moellendorffii HOM05D006201 ORTHO05D007178 6.9e-19 100.1 416 25.2
Nn2g13629 Nelumbo nucifera HOM05D001630 ORTHO05D007178 2.6e-18 98.2 198 34.3
TAR623G1438 Trochodendron aralioides HOM05D006201 ORTHO05D007178 8.4e-17 93.2 109 45.9
Hma1.2p1_0479F.1_g161690 Hydrangea macrophylla HOM05D006201 ORTHO05D007178 7.1e-16 90.1 141 39.0
Peaxi162Scf00028g00413 Petunia axillaris HOM05D006201 ORTHO05D007178 9.3e-16 89.7 269 28.3
CBR_g8780 Chara braunii HOM05D006201 ORTHO05D007178 2.1e-12 78.6 309 24.9
Rhsim05G0225900 Rhododendron simsii HOM05D006201 ORTHO05D007178 8.1e-12 76.6 114 43.0
SEGI_33665 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 9.3e-08 63.2 282 26.6
ATR0605G310 Amborella trichopoda HOM05D006201 ORTHO05D007178 4.6e-07 60.8 104 36.5


User provided reference genes

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