Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 3.7e-274 947.6 473 100.0
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 3.6e-229 798.1 478 85.6
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 2.7e-224 781.9 474 84.8
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 1.1e-209 733.4 469 78.3
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 7.6e-203 710.7 394 89.8
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 2.1e-200 702.6 418 81.6
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 4.2e-193 678.3 470 71.9
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.1e-190 670.2 458 72.5
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 5.7e-182 641.3 411 76.2
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 1.2e-171 607.1 461 68.1
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 1.1e-169 600.5 388 76.3
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 5.1e-167 591.7 413 68.8
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 6.9e-164 581.3 413 67.8
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 1.2e-163 580.5 419 68.7
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 4.7e-160 568.5 364 75.3
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.4e-159 567.0 422 66.4
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 1.8e-159 566.6 413 67.1
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 5.7e-158 561.6 418 66.3
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 6.3e-157 558.1 416 66.1
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 9.1e-156 554.3 412 65.8
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 1.6e-155 553.5 414 65.7
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 2.0e-155 553.1 484 58.5
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 1.3e-154 550.4 460 61.1
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 2.9e-154 549.3 418 64.8
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 5.0e-154 548.5 472 58.7
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 6.5e-154 548.1 418 64.6
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.1e-153 547.4 414 65.2
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 3.2e-153 545.8 420 63.1
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 3.2e-153 545.8 430 62.8
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 5.5e-153 545.0 413 64.4
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 7.2e-153 544.7 416 64.7
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 7.2e-153 544.7 425 63.1
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 9.4e-153 544.3 418 64.6
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.2e-152 543.9 419 62.5
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 6.1e-152 541.6 412 65.5
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 6.1e-152 541.6 430 62.1
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 1.0e-151 540.8 418 64.6
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 1.0e-151 540.8 415 63.6
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 1.4e-151 540.4 422 63.5
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 1.8e-151 540.0 413 64.6
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 3.0e-151 539.3 415 63.4
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 6.7e-151 538.1 414 64.7
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 8.8e-151 537.7 418 63.9
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 2.6e-150 536.2 417 60.9
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 5.7e-150 535.0 430 62.6
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 9.7e-150 534.3 467 58.2
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 1.3e-149 533.9 424 61.8
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 2.2e-149 533.1 450 60.4
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 2.2e-149 533.1 436 61.9
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 2.2e-149 533.1 421 62.9
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 2.8e-149 532.7 423 62.6
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 3.7e-149 532.3 455 58.0
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 6.3e-149 531.6 472 57.4
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 1.1e-148 530.8 475 57.3
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 3.1e-148 529.3 456 58.3
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 7.7e-147 524.6 413 62.7
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 2.9e-146 522.7 467 56.5
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 3.8e-146 522.3 420 61.0
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 5.0e-146 521.9 452 58.0
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 6.5e-146 521.5 417 60.9
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 6.5e-146 521.5 455 56.7
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 6.5e-146 521.5 395 64.8
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 2.5e-145 519.6 402 63.9
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 4.2e-145 518.8 461 57.0
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 5.5e-145 518.5 426 59.9
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.2e-144 517.3 402 61.7
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 4.7e-144 515.4 419 59.4
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 8.0e-144 514.6 472 55.1
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 1.0e-143 514.2 417 60.9
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 1.4e-143 513.8 465 55.9
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 1.8e-143 513.5 412 60.7
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 4.0e-143 512.3 472 54.0
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 1.5e-142 510.4 417 60.4
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 1.1e-140 504.2 421 59.1
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.4e-140 503.8 475 53.9
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 9.1e-140 501.1 411 59.9
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 2.7e-139 499.6 419 60.1
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 1.3e-138 497.3 498 54.8
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 1.3e-138 497.3 434 58.3
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 3.8e-138 495.7 464 53.2
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 1.9e-137 493.4 421 57.7
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 5.7e-134 481.9 473 52.6
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 2.2e-133 479.9 437 55.6
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 4.5e-131 472.2 477 52.8
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 8.0e-128 461.5 364 61.3
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 8.9e-127 458.0 389 58.1
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 2.6e-126 456.4 365 60.3
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 4.4e-126 455.7 411 55.0
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 1.3e-125 454.1 417 54.4
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 1.4e-124 450.7 434 52.8
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 9.2e-124 448.0 361 59.6
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 9.2e-124 448.0 419 55.4
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 5.2e-119 432.2 417 52.5
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 9.2e-116 421.4 471 48.6
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 2.3e-106 390.2 308 63.3
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.0e-106 389.8 426 50.0
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.1e-104 383.6 412 50.2
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 7.3e-97 358.6 433 42.5
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.4e-95 354.4 304 60.5
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 5.2e-95 352.4 430 42.6
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 1.6e-88 330.9 407 42.3
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.4e-87 327.8 355 51.3
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 6.9e-87 325.5 397 42.6
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 6.4e-85 318.9 293 54.3
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 9.0e-79 298.5 222 64.9
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 1.8e-71 274.2 247 57.5
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.0e-66 258.5 272 52.9
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 1.8e-66 257.7 251 53.8
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 3.8e-53 213.4 115 90.4
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 1.0e-50 205.3 443 32.5
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 2.8e-48 197.2 232 47.0
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 8.0e-43 179.1 450 31.6
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 3.0e-34 150.6 105 65.7
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 6.7e-34 149.4 100 65.0
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 9.1e-31 139.0 95 65.3
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.1e-28 132.1 83 79.5
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 2.3e-26 124.4 93 60.2
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 3.0e-26 124.0 116 50.0
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.5e-25 121.7 396 27.3
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 9.8e-25 119.0 69 85.5
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 3.5e-22 110.5 130 46.9
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 5.4e-15 86.7 92 43.5
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 5.9e-14 83.2 69 53.6
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 3.6e-11 73.9 98 48.0
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.6e-09 67.8 51 58.8
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 4.9e-08 63.5 42 66.7


User provided reference genes

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