Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 3.0e-145 518.5 254 100.0
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 8.4e-124 447.2 256 87.9
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 4.3e-120 434.9 256 83.2
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 4.8e-111 404.8 262 77.1
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 2.1e-106 389.4 263 74.5
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 3.5e-106 388.7 257 75.1
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 9.0e-102 374.0 259 70.7
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 3.8e-100 368.6 259 70.3
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 4.2e-83 312.0 261 58.6
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 9.7e-80 300.8 255 59.2
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 2.8e-79 299.3 260 56.9
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 4.8e-79 298.5 259 56.8
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 1.8e-78 296.6 260 56.9
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 4.1e-78 295.4 259 56.8
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 4.5e-77 292.0 258 56.2
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 4.5e-77 292.0 258 57.0
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 4.5e-77 292.0 248 61.7
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 1.3e-76 290.4 258 55.4
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 1.3e-76 290.4 260 55.8
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 3.8e-76 288.9 254 57.1
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 5.0e-76 288.5 248 61.3
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 5.0e-76 288.5 255 55.7
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 2.5e-75 286.2 250 58.4
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 4.2e-75 285.4 257 55.6
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 5.5e-75 285.0 250 58.0
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 5.5e-75 285.0 250 58.0
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 7.2e-75 284.6 250 58.0
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 7.2e-75 284.6 157 87.9
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 7.2e-75 284.6 157 87.9
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 7.2e-75 284.6 157 87.9
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 9.4e-75 284.3 250 57.6
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 1.2e-74 283.9 260 56.2
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 1.2e-74 283.9 259 54.4
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.2e-74 283.9 250 57.6
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 1.2e-74 283.9 255 56.5
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 1.6e-74 283.5 259 54.4
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 4.7e-74 282.0 257 55.6
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 4.7e-74 282.0 257 55.3
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.0e-73 280.8 250 57.6
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.0e-73 280.8 250 57.6
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 1.4e-73 280.4 257 54.9
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 5.2e-73 278.5 254 54.7
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 1.2e-72 277.3 261 54.8
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 2.6e-72 276.2 269 53.5
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 2.6e-72 276.2 260 54.2
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 2.6e-72 276.2 233 57.1
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.7e-71 273.5 263 52.1
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 2.8e-71 272.7 257 56.0
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 6.3e-71 271.6 260 53.8
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 1.4e-70 270.4 259 54.8
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 1.8e-70 270.0 257 51.8
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 2.4e-70 269.6 263 51.7
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 3.1e-70 269.2 257 53.3
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 4.1e-70 268.9 259 52.1
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 9.1e-70 267.7 257 52.9
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 1.2e-69 267.3 260 54.2
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 1.2e-69 267.3 259 51.7
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 2.0e-69 266.5 257 52.5
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 3.5e-69 265.8 244 54.9
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 1.0e-68 264.2 252 52.8
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 1.1e-67 260.8 253 52.6
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 1.9e-67 260.0 257 52.5
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 2.5e-67 259.6 255 52.2
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 3.2e-67 259.2 255 52.2
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 7.2e-67 258.1 259 52.1
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 1.2e-66 257.3 253 50.2
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 1.6e-66 256.9 259 51.7
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 2.1e-66 256.5 259 51.7
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 2.1e-66 256.5 255 51.4
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 2.1e-66 256.5 259 52.1
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 2.7e-66 256.1 262 50.8
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 2.7e-66 256.1 233 54.5
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 3.6e-66 255.8 253 49.8
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 4.7e-66 255.4 253 52.2
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 4.7e-66 255.4 253 52.2
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 4.7e-66 255.4 253 52.2
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 6.1e-66 255.0 253 50.6
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 8.0e-66 254.6 260 51.5
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 8.0e-66 254.6 209 62.2
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 1.4e-65 253.8 258 51.9
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 1.8e-65 253.4 253 51.8
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 3.0e-65 252.7 249 49.0
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 2.0e-64 250.0 235 50.2
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 4.4e-64 248.8 217 58.5
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 1.7e-63 246.9 260 49.2
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 8.3e-63 244.6 155 75.5
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 3.1e-62 242.7 253 48.2
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 7.0e-62 241.5 231 53.2
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 8.6e-60 234.6 249 48.2
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 1.1e-59 234.2 202 55.9
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 3.3e-59 232.6 224 51.8
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 5.6e-59 231.9 308 42.2
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 2.3e-57 226.5 247 46.2
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 8.9e-57 224.6 252 46.8
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 5.7e-56 221.9 210 52.9
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 9.8e-56 221.1 247 46.2
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 3.7e-55 219.2 234 48.3
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 3.7e-55 219.2 265 44.2
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 9.2e-54 214.5 164 64.0
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 1.2e-53 214.2 121 86.8
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 3.5e-53 212.6 259 45.9
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 3.0e-52 209.5 183 56.8
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 3.0e-52 209.5 232 49.1
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 1.9e-51 206.8 112 92.0
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 3.6e-50 202.6 246 45.9
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 5.4e-46 188.7 165 57.0
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 7.8e-45 184.9 151 55.6
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 3.1e-41 172.9 184 48.9
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 8.9e-41 171.4 101 84.2
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 1.4e-38 164.1 101 81.2
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 5.4e-38 162.2 251 39.4
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 2.1e-34 150.2 156 46.2
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 2.2e-31 140.2 204 39.2
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 9.2e-30 134.8 167 48.5
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 9.2e-30 134.8 145 45.5
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 1.2e-29 134.4 122 49.2
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 7.8e-29 131.7 160 48.1
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 1.0e-28 131.3 261 29.5
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 1.2e-26 124.4 215 32.1
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 1.6e-21 107.5 157 44.6
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 2.7e-21 106.7 80 70.0
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 8.1e-18 95.1 84 51.2
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 6.0e-13 79.0 73 47.9
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 1.0e-12 78.2 72 55.6
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 3.0e-12 76.6 76 52.6
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 3.9e-12 76.3 92 44.6
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 4.3e-11 72.8 48 68.8
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 1.6e-10 70.9 67 49.3
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 4.0e-09 66.2 103 39.8


User provided reference genes

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