Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06884_v3 Cicer arietinum L. HOM05D005759 ORTHO05D007172 4.8e-141 504.6 275 100.0
Psat6g094520 Pisum sativum HOM05D005759 ORTHO05D007172 9.1e-108 394.0 284 79.2
Medtr1g050730 Medicago truncatula HOM05D005759 ORTHO05D007172 1.2e-94 350.5 274 67.2
TPR.G7613 Trifolium pratense HOM05D005759 ORTHO05D007172 2.9e-93 345.9 275 66.5
Lj5g0004167 Lotus japonicus HOM05D005759 ORTHO05D007172 2.6e-86 322.8 247 67.2
arahy.Tifrunner.gnm1.ann1.Y61W31 Arachis hypogaea HOM05D005759 ORTHO05D007172 1.6e-83 313.5 276 66.7
Glyma.02G165400 Glycine max HOM05D005759 ORTHO05D007172 3.5e-83 312.4 295 66.1
Lalb_Chr03g0036351 Lupinus albus HOM05D005759 ORTHO05D007172 1.0e-82 310.8 294 58.5
arahy.Tifrunner.gnm1.ann1.0Q505S Arachis hypogaea HOM05D005759 ORTHO05D007172 3.0e-82 309.3 276 65.9
Phvul.007G245100 Phaseolus vulgaris HOM05D005759 ORTHO05D007172 2.1e-80 303.1 298 63.8
VMungo0720G2821 Vigna mungo HOM05D005759 ORTHO05D007172 7.6e-78 294.7 274 65.3
CiPaw.13G035800 Carya illinoinensis HOM05D005759 ORTHO05D007172 2.9e-69 266.2 283 50.2
Cfa011218 Carpinus fangiana HOM05D005759 ORTHO05D007172 1.7e-66 256.9 299 46.2
Atru.chr12.959 Acer truncatum HOM05D005759 ORTHO05D007172 2.3e-66 256.5 289 52.2
Haze_02624 Corylus avellana HOM05D005759 ORTHO05D007172 2.3e-66 256.5 299 46.2
QL04p040912 Quercus lobata HOM05D005759 ORTHO05D007172 4.4e-62 242.3 300 46.3
Gohir.D10G206700 Gossypium hirsutum HOM05D005759 ORTHO05D007172 4.9e-61 238.8 293 45.1
THA.LOC104826349 Tarenaya hassleriana HOM05D005759 ORTHO05D007172 8.4e-61 238.0 292 45.2
Actinidia31089 Actinidia chinensis HOM05D005759 ORTHO05D007172 1.4e-60 237.3 298 49.3
Potri.010G234000 Populus trichocarpa HOM05D005759 ORTHO05D007172 1.4e-60 237.3 284 50.7
Gorai.011G232200 Gossypium raimondii HOM05D005759 ORTHO05D007172 2.4e-60 236.5 293 44.7
Manes.07G091866 Manihot esculenta HOM05D005759 ORTHO05D007172 3.2e-60 236.1 301 46.5
Duzib114G0077 Durio zibethinus HOM05D005759 ORTHO05D007172 4.2e-60 235.7 303 43.2
Dinv31290 Davidia involucrata HOM05D005759 ORTHO05D007172 9.3e-60 234.6 304 42.4
CsaV3_2G032950 Cucumis sativus L. HOM05D005759 ORTHO05D007172 1.2e-59 234.2 292 46.6
Ciclev10031564m.g Citrus clementina HOM05D005759 ORTHO05D007172 1.6e-59 233.8 304 48.0
GSVIVG01034722001 Vitis vinifera HOM05D005759 ORTHO05D007172 6.0e-59 231.9 274 53.3
MD02G1244900 Malus domestica HOM05D005759 ORTHO05D007172 7.9e-59 231.5 299 43.5
CAN.G135.64 Capsicum annuum HOM05D005759 ORTHO05D007172 1.7e-58 230.3 274 45.6
MELO3C019880.2 Cucumis melo HOM05D005759 ORTHO05D007172 1.7e-58 230.3 290 45.9
PGR142G1839 Punica granatum HOM05D005759 ORTHO05D007172 1.7e-58 230.3 291 45.4
ClCG08G008080 Citrullus lanatus HOM05D005759 ORTHO05D007172 3.9e-58 229.2 293 45.7
MD07G1072000 Malus domestica HOM05D005759 ORTHO05D007172 3.9e-58 229.2 299 43.8
RcHm_v2.0_Chr1g0334181 Rosa chinensis HOM05D005759 ORTHO05D007172 5.1e-58 228.8 295 46.1
Nitab4.5_0010486g0020 Nicotiana tabacum HOM05D005759 ORTHO05D007172 6.6e-58 228.4 275 44.0
Sed0025588 Sechium edule HOM05D005759 ORTHO05D007172 8.7e-58 228.0 296 45.9
FAN03G0647 Fragaria x ananassa HOM05D005759 ORTHO05D007172 1.1e-57 227.6 290 45.2
Sabra10G0181400 Salix brachista HOM05D005759 ORTHO05D007172 2.5e-57 226.5 297 46.8
FvH4_7g06330 Fragaria vesca HOM05D005759 ORTHO05D007172 3.3e-57 226.1 290 45.2
Thecc.10G099000 Theobroma cacao HOM05D005759 ORTHO05D007172 5.6e-57 225.3 304 41.4
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 1.3e-56 224.2 301 45.2
Nitab4.5_0002259g0090 Nicotiana tabacum HOM05D005759 ORTHO05D007172 3.6e-56 222.6 278 43.5
DCAR_030749 Daucus carota HOM05D005759 ORTHO05D007172 4.8e-56 222.2 288 44.4
COL.COLO4_35597 Corchorus olitorius HOM05D005759 ORTHO05D007172 1.1e-55 221.1 298 44.3
vmacro10276 Vaccinium macrocarpon HOM05D005759 ORTHO05D007172 1.1e-55 221.1 289 42.9
Oeu059850.1 Olea europaea HOM05D005759 ORTHO05D007172 1.8e-55 220.3 286 42.0
Prupe.2G090100 Prunus persica HOM05D005759 ORTHO05D007172 1.8e-55 220.3 302 51.0
Rhsim09G0144200 Rhododendron simsii HOM05D005759 ORTHO05D007172 1.8e-55 220.3 291 43.3
FAN06G0090 Fragaria x ananassa HOM05D005759 ORTHO05D007172 2.4e-55 219.9 300 44.0
PGSC0003DMG400027344 Solanum tuberosum HOM05D005759 ORTHO05D007172 1.2e-54 217.6 274 43.8
Actinidia34708 Actinidia chinensis HOM05D005759 ORTHO05D007172 2.6e-54 216.5 298 51.0
Peaxi162Scf00244g00007 Petunia axillaris HOM05D005759 ORTHO05D007172 4.5e-54 215.7 278 42.8
TAR623G0127 Trochodendron aralioides HOM05D005759 ORTHO05D007172 7.6e-54 214.9 293 43.3
Nn2g13981 Nelumbo nucifera HOM05D005759 ORTHO05D007172 1.3e-53 214.2 259 45.6
Solyc11g007610.2 Solanum lycopersicum HOM05D005759 ORTHO05D007172 1.3e-53 214.2 274 44.5
Sopen11g003460 Solanum pennellii HOM05D005759 ORTHO05D007172 1.7e-53 213.8 274 43.1
Cc02_g10290 Coffea canephora HOM05D005759 ORTHO05D007172 3.8e-53 212.6 305 40.3
Sc06g0002190 Simmondsia chinensis HOM05D005759 ORTHO05D007172 6.4e-53 211.8 291 49.1
CSS0028406 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 1.1e-52 211.1 259 43.6
TWI38G0593 Tripterygium wilfordii HOM05D005759 ORTHO05D007172 5.5e-52 208.8 306 43.1
AUR62041532 Chenopodium quinoa HOM05D005759 ORTHO05D007172 2.7e-51 206.5 274 40.5
SalBow6G0601 Salvia bowleyana HOM05D005759 ORTHO05D007172 4.6e-51 205.7 292 43.2
Hma1.2p1_0352F.1_g133040 Hydrangea macrophylla HOM05D005759 ORTHO05D007172 1.8e-50 203.8 311 42.4
HanXRQChr14g0456321 Helianthus annuus HOM05D005759 ORTHO05D007172 2.3e-50 203.4 280 42.5
Sp4g11420 Schrenkiella parvula HOM05D005759 ORTHO05D007172 3.0e-50 203.0 280 43.2
CANSAT56G0546 Cannabis sativa HOM05D005759 ORTHO05D007172 5.1e-50 202.2 282 50.7
AUR62041544 Chenopodium quinoa HOM05D005759 ORTHO05D007172 5.1e-50 202.2 276 40.6
Lsat_1_v5_gn_2_102781 Lactuca sativa HOM05D005759 ORTHO05D007172 6.7e-50 201.8 286 39.9
RhsimUnG0061600 Rhododendron simsii HOM05D005759 ORTHO05D007172 6.7e-50 201.8 332 38.3
HPP92_024384 Vanilla planifolia HOM05D005759 ORTHO05D007172 6.7e-50 201.8 276 42.0
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 3.3e-49 199.5 282 42.9
Aqoxy1G00957 Aquilegia oxysepala HOM05D005759 ORTHO05D007172 4.3e-49 199.1 286 41.6
Hund06749 Selenicereus undatus HOM05D005759 ORTHO05D007172 4.3e-49 199.1 291 41.6
AT2G28600 Arabidopsis thaliana HOM05D005759 ORTHO05D007172 4.8e-48 195.7 280 41.4
AL4G23090 Arabidopsis lyrata HOM05D005759 ORTHO05D007172 6.2e-48 195.3 282 40.4
MSTRG.409 Avicennia marina HOM05D005759 ORTHO05D007172 8.1e-48 194.9 260 43.5
MBI17_g30596_MAGBIO Magnolia biondii HOM05D005759 ORTHO05D007172 1.8e-47 193.7 301 45.8
HanXRQChr16g0513241 Helianthus annuus HOM05D005759 ORTHO05D007172 3.1e-47 193.0 277 39.7
SGA_v2.0_scaffold13G06508 Striga asiatica HOM05D005759 ORTHO05D007172 4.0e-47 192.6 289 39.4
Ah.04g163640 Amaranthus hybridus HOM05D005759 ORTHO05D007172 1.2e-46 191.0 282 39.0
Carub.0004s0956 Capsella rubella HOM05D005759 ORTHO05D007172 1.2e-46 191.0 279 41.6
EL10Ac4g08636 Beta vulgaris HOM05D005759 ORTHO05D007172 2.0e-46 190.3 286 37.1
CDE04G0943 Ceratophyllum demersum HOM05D005759 ORTHO05D007172 4.5e-46 189.1 283 38.2
CARHR121620 Cardamine hirsuta HOM05D005759 ORTHO05D007172 5.8e-46 188.7 278 40.3
Zm00001eb164020 Zea mays HOM05D005759 ORTHO05D007172 7.6e-46 188.3 277 41.9
Eucgr.G02717 Eucalyptus grandis HOM05D005759 ORTHO05D007172 5.5e-44 182.2 231 43.3
Migut.F01660 Erythranthe guttata HOM05D005759 ORTHO05D007172 7.1e-44 181.8 255 42.0
Os12g0147500 Oryza sativa ssp. japonica HOM05D005759 ORTHO05D007172 7.1e-44 181.8 276 39.9
A08p00720 Brassica napus HOM05D005759 ORTHO05D007172 3.5e-43 179.5 279 39.1
BraA08t32129Z Brassica rapa HOM05D005759 ORTHO05D007172 3.5e-43 179.5 279 39.1
Thhalv10016555m.g Eutrema salsugineum HOM05D005759 ORTHO05D007172 3.5e-43 179.5 280 44.3
ATR0820G119 Amborella trichopoda HOM05D005759 ORTHO05D007172 6.0e-43 178.7 293 37.9
unitig_736.g22320 Utricularia gibba HOM05D005759 ORTHO05D007172 5.7e-41 172.2 303 36.0
BolC3t21576H Brassica oleracea HOM05D005759 ORTHO05D007172 9.6e-41 171.4 276 46.0
BcaB04g16965 Brassica carinata HOM05D005759 ORTHO05D007172 3.7e-40 169.5 278 46.0
C03p92620 Brassica napus HOM05D005759 ORTHO05D007172 1.4e-39 167.5 276 45.7
BcaC01g01514 Brassica carinata HOM05D005759 ORTHO05D007172 1.8e-39 167.2 276 45.3
Nn6g35073 Nelumbo nucifera HOM05D005759 ORTHO05D007172 3.1e-39 166.4 274 40.1
PSO339G3253 Papaver somniferum HOM05D005759 ORTHO05D007172 6.9e-39 165.2 274 38.7
PSO384G4559 Papaver somniferum HOM05D005759 ORTHO05D007172 3.4e-38 162.9 274 38.0
Duzib128G1757 Durio zibethinus HOM05D005759 ORTHO05D007172 6.5e-37 158.7 140 53.6
Migut.F00917 Erythranthe guttata HOM05D005759 ORTHO05D007172 1.9e-36 157.1 249 38.6
ECA238G2526 Erigeron canadensis HOM05D005759 ORTHO05D007172 4.2e-36 156.0 242 38.8
CSS0000330 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 2.8e-32 143.3 225 37.3
SalBow4G3335 Salvia bowleyana HOM05D005759 ORTHO05D007172 1.8e-31 140.6 129 49.6
Zm00001eb086490 Zea mays HOM05D005759 ORTHO05D007172 1.7e-29 134.0 131 48.9
PSO063G1818 Papaver somniferum HOM05D005759 ORTHO05D007172 2.2e-29 133.7 165 40.6
unitig_899.g14480 Utricularia gibba HOM05D005759 ORTHO05D007172 9.7e-25 118.2 151 39.1
SGA_v2.0_scaffold62G21347 Striga asiatica HOM05D005759 ORTHO05D007172 4.1e-23 112.8 140 40.7
Zm00001eb201540 Zea mays HOM05D005759 ORTHO05D007172 4.5e-22 109.4 92 53.3
Cpa.g.sc720.1 Carica papaya HOM05D005759 ORTHO05D007172 4.7e-19 99.4 182 41.8
Pp3c1_25970 Physcomitrium patens HOM05D005759 ORTHO05D007172 5.1e-18 95.9 300 29.3
Mapoly0120s0020 Marchantia polymorpha HOM05D005759 ORTHO05D007172 1.8e-15 87.4 338 27.5
SEGI_00328 Sequoiadendron giganteum HOM05D005759 ORTHO05D000001 9.1e-15 85.1 264 29.2
PSO170G6466 Papaver somniferum HOM05D005759 ORTHO05D007172 2.7e-06 57.0 57 38.6
Peaxi162Scf00244g00111 Petunia axillaris HOM05D005759 ORTHO05D007172 2.7e-06 57.0 30 76.7
AagrBONN_evm.TU.Sc2ySwM_228.2343 Anthoceros agrestis HOM05D005759 ORTHO05D007172 4.5e-06 56.2 96 37.5
arahy.Tifrunner.gnm1.ann1.94BM57 Arachis hypogaea HOM05D011000 ORTHO05D083736 4.5e-06 56.2 76 40.8


User provided reference genes

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