Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06802_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 1.2e-191 672.9 332 100.0
TPR.G33480 Trifolium pratense HOM05D006539 ORTHO05D008694 2.5e-152 542.3 327 85.0
Medtr7g012240 Medicago truncatula HOM05D006539 ORTHO05D008694 3.6e-151 538.5 333 84.1
Psat3g198480 Pisum sativum HOM05D006539 ORTHO05D008694 1.0e-145 520.4 373 74.3
Glyma.08G241400 Glycine max HOM05D006539 ORTHO05D008694 1.3e-135 486.9 332 75.6
arahy.Tifrunner.gnm1.ann1.YFBV2Q Arachis hypogaea HOM05D006539 ORTHO05D008694 2.1e-130 469.5 326 74.2
Lj1g0006679 Lotus japonicus HOM05D006539 ORTHO05D008694 3.9e-129 465.3 346 71.4
Lalb_Chr10g0093241 Lupinus albus HOM05D006539 ORTHO05D008694 3.9e-129 465.3 346 72.3
VMungo1383G3577 Vigna mungo HOM05D006539 ORTHO05D008694 2.8e-127 459.1 337 71.8
Phvul.008G040300 Phaseolus vulgaris HOM05D006539 ORTHO05D008694 6.2e-127 458.0 338 72.2
arahy.Tifrunner.gnm1.ann1.54MYG6 Arachis hypogaea HOM05D006539 ORTHO05D008694 1.7e-124 449.9 364 67.3
Manes.02G050600 Manihot esculenta HOM05D006539 ORTHO05D008694 1.2e-117 427.2 328 67.4
FAN05G4473 Fragaria x ananassa HOM05D006539 ORTHO05D008694 5.8e-117 424.9 352 63.6
TWI32G0765 Tripterygium wilfordii HOM05D006539 ORTHO05D008694 1.0e-116 424.1 358 64.0
GSVIVG01011483001 Vitis vinifera HOM05D006539 ORTHO05D008694 3.8e-116 422.2 327 65.1
RcHm_v2.0_Chr2g0166661 Rosa chinensis HOM05D006539 ORTHO05D008694 1.1e-115 420.6 357 63.6
Eucgr.I01991 Eucalyptus grandis HOM05D006539 ORTHO05D008694 3.2e-115 419.1 277 72.9
CiPaw.03G091900 Carya illinoinensis HOM05D006539 ORTHO05D008694 1.2e-114 417.2 290 72.1
Prupe.3G259900 Prunus persica HOM05D006539 ORTHO05D008694 1.6e-114 416.8 361 61.5
FvH4_6g47560 Fragaria vesca HOM05D006539 ORTHO05D008694 3.5e-114 415.6 256 78.5
Atru.chr8.368 Acer truncatum HOM05D006539 ORTHO05D008694 1.0e-113 414.1 354 61.3
Lju41A8T108 Lonicera japonica HOM05D006539 ORTHO05D008694 1.3e-113 413.7 286 73.1
PGR004G2004 Punica granatum HOM05D006539 ORTHO05D008694 2.5e-112 409.5 273 74.0
Thecc.04G090200 Theobroma cacao HOM05D006539 ORTHO05D008694 9.7e-112 407.5 342 63.2
Duzib264G0172 Durio zibethinus HOM05D006539 ORTHO05D008694 2.2e-111 406.4 344 62.2
Gorai.007G080900 Gossypium raimondii HOM05D006539 ORTHO05D008694 6.3e-111 404.8 267 73.8
Gohir.A11G071300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 8.2e-111 404.4 270 73.0
MD17G1055800 Malus domestica HOM05D006539 ORTHO05D008694 8.2e-111 404.4 360 60.3
Potri.004G122300 Populus trichocarpa HOM05D006539 ORTHO05D008694 8.2e-111 404.4 335 63.3
Sabra04G0067100 Salix brachista HOM05D006539 ORTHO05D008694 9.0e-110 401.0 279 71.0
CANSAT64G0188 Cannabis sativa HOM05D006539 ORTHO05D008694 1.5e-109 400.2 364 59.1
Gohir.D11G075300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 1.5e-109 400.2 252 76.6
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 2.6e-109 399.4 339 62.5
Ca_06844_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 3.4e-109 399.1 215 93.5
ClCG10G015450 Citrullus lanatus HOM05D003516 ORTHO05D004068 3.4e-109 399.1 289 67.1
QL02p039353 Quercus lobata HOM05D006539 ORTHO05D008694 3.4e-109 399.1 344 63.1
Peaxi162Scf00166g00943 Petunia axillaris HOM05D006539 ORTHO05D008694 4.5e-109 398.7 353 60.6
Nn4g23332 Nelumbo nucifera HOM05D006539 ORTHO05D008694 5.9e-109 398.3 338 62.7
DCAR_011065 Daucus carota HOM05D006539 ORTHO05D008694 7.6e-109 397.9 276 69.9
PGSC0003DMG400001350 Solanum tuberosum HOM05D006539 ORTHO05D008694 1.3e-108 397.1 278 69.4
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 2.9e-108 396.0 292 67.5
Sed0012723 Sechium edule HOM05D003516 ORTHO05D004068 3.8e-108 395.6 285 68.4
QL02p039600 Quercus lobata HOM05D006539 ORTHO05D008694 5.0e-108 395.2 344 62.8
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 6.5e-108 394.8 339 62.2
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 1.1e-107 394.0 269 71.4
CDE06G2615 Ceratophyllum demersum HOM05D006539 ORTHO05D008694 1.4e-107 393.7 288 67.4
Oeu000853.1 Olea europaea HOM05D006539 ORTHO05D008694 1.9e-107 393.3 360 60.6
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 3.2e-107 392.5 328 61.6
Solyc02g088540.3 Solanum lycopersicum HOM05D006539 ORTHO05D008694 4.2e-107 392.1 280 68.6
CAN.G206.194 Capsicum annuum HOM05D006539 ORTHO05D008694 5.5e-107 391.7 322 62.1
Sopen02g033260 Solanum pennellii HOM05D006539 ORTHO05D008694 7.2e-107 391.3 278 68.7
EL10Ac2g03043 Beta vulgaris HOM05D006539 ORTHO05D008694 2.3e-105 386.3 292 65.4
CsaV3_3G041040 Cucumis sativus L. HOM05D006539 ORTHO05D008694 3.0e-105 386.0 344 59.0
Cc07_g03820 Coffea canephora HOM05D006539 ORTHO05D008694 5.1e-105 385.2 288 67.0
AUR62018139 Chenopodium quinoa HOM05D006539 ORTHO05D008694 6.7e-105 384.8 258 72.5
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 6.7e-105 384.8 344 58.4
SalBow1G8487 Salvia bowleyana HOM05D006539 ORTHO05D008694 1.1e-104 384.0 336 60.4
Aqoxy3G00450 Aquilegia oxysepala HOM05D006539 ORTHO05D008694 1.9e-104 383.3 273 69.2
CARHR197920 Cardamine hirsuta HOM05D006539 ORTHO05D008694 2.5e-104 382.9 350 56.9
Rhsim10G0046900 Rhododendron simsii HOM05D006539 ORTHO05D008694 7.4e-104 381.3 332 58.1
Aa31LG11G14170 Aethionema arabicum HOM05D006539 ORTHO05D008694 1.3e-103 380.6 353 56.9
vmacro05668 Vaccinium macrocarpon HOM05D006539 ORTHO05D008694 1.3e-103 380.6 287 65.5
Hund15564 Selenicereus undatus HOM05D006539 ORTHO05D008694 3.7e-103 379.0 237 76.4
Haze_14476 Corylus avellana HOM05D003516 ORTHO05D004068 8.2e-103 377.9 284 67.3
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 1.1e-102 377.5 301 64.1
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 1.1e-102 377.5 288 65.6
HPP92_013411 Vanilla planifolia HOM05D006539 ORTHO05D008694 1.8e-102 376.7 334 61.4
Sc11g0004810 Simmondsia chinensis HOM05D006539 ORTHO05D008694 3.1e-102 375.9 350 61.1
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 4.1e-102 375.6 352 57.4
MSTRG.23905 Avicennia marina HOM05D006539 ORTHO05D008694 9.1e-102 374.4 283 64.7
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 9.1e-102 374.4 355 56.3
SGA_v2.0_scaffold4G02416 Striga asiatica HOM05D006539 ORTHO05D008694 9.1e-102 374.4 292 63.4
Os07g0598100 Oryza sativa ssp. japonica HOM05D006539 ORTHO05D008694 2.0e-101 373.2 260 69.6
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 1.3e-100 370.5 351 57.0
AL6G26250 Arabidopsis lyrata HOM05D006539 ORTHO05D008694 4.2e-99 365.5 354 55.6
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 5.5e-99 365.2 354 55.6
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 9.4e-99 364.4 348 56.6
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 1.2e-98 364.0 355 55.5
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 1.6e-98 363.6 355 55.2
Migut.H00658 Erythranthe guttata HOM05D006539 ORTHO05D008694 2.1e-98 363.2 270 66.7
FAN14G0848 Fragaria x ananassa HOM05D006539 ORTHO05D008694 2.1e-98 363.2 348 59.8
PSO478G0472 Papaver somniferum HOM05D006539 ORTHO05D008694 1.8e-97 360.1 266 67.7
Zm00001eb326670 Zea mays HOM05D006539 ORTHO05D008694 1.8e-97 360.1 344 56.4
ATR0111G028 Amborella trichopoda HOM05D006539 ORTHO05D008694 3.9e-97 359.0 240 71.7
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 2.0e-96 356.7 357 55.2
AUR62034477 Chenopodium quinoa HOM05D006539 ORTHO05D008694 9.1e-94 347.8 367 52.0
unitig_899.g15160 Utricularia gibba HOM05D006539 ORTHO05D008694 2.5e-91 339.7 278 59.4
Nitab4.5_0008573g0030 Nicotiana tabacum HOM05D006539 ORTHO05D008694 2.7e-90 336.3 363 52.6
HPP92_006554 Vanilla planifolia HOM05D006539 ORTHO05D008694 1.8e-86 323.6 298 58.7
SEGI_40704 Sequoiadendron giganteum HOM05D006539 ORTHO05D008694 2.1e-82 310.1 237 61.6
MELO3C009837.2 Cucumis melo HOM05D006539 ORTHO05D008694 2.6e-80 303.1 332 53.9
AagrBONN_evm.TU.Sc2ySwM_117.170 Anthoceros agrestis HOM05D006539 ORTHO05D008694 6.5e-76 288.5 249 56.2
Pp3c12_19160 Physcomitrium patens HOM05D006539 ORTHO05D008694 9.4e-75 284.6 237 55.3
Mapoly0088s0068 Marchantia polymorpha HOM05D006539 ORTHO05D008694 1.5e-72 277.3 242 54.1
SMO228G0204 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 9.8e-72 274.6 239 52.7
arahy.Tifrunner.gnm1.ann1.B86ER2 Arachis hypogaea HOM05D006539 ORTHO05D009236 2.2e-71 273.5 198 69.2
Ciclev10013894m.g Citrus clementina HOM05D006539 ORTHO05D008694 2.2e-71 273.5 242 57.9
FAN09G1445 Fragaria x ananassa HOM05D006539 ORTHO05D008694 1.3e-68 264.2 350 46.0
CBR_g38172 Chara braunii HOM05D006539 ORTHO05D008694 8.3e-63 245.0 234 50.9
SMO116G0014 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 1.8e-62 243.8 238 48.3
CSS0042966 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 1.1e-59 234.6 235 56.2
CSS0047989 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 1.5e-59 234.2 235 56.2
HPP92_013415 Vanilla planifolia HOM05D006539 ORTHO05D008694 9.5e-59 231.5 189 63.5
Dinv33805 Davidia involucrata HOM05D006539 ORTHO05D008694 6.1e-58 228.8 185 62.2
Nitab4.5_0003216g0020 Nicotiana tabacum HOM05D006539 ORTHO05D008694 6.1e-58 228.8 365 41.9
AUR62044515 Chenopodium quinoa HOM05D006539 ORTHO05D008694 3.9e-52 209.5 114 83.3
PRCOL_00002708 Prasinoderma coloniale HOM05D006539 ORTHO05D008694 5.2e-49 199.1 217 45.6
Cre03.g169700 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D008694 1.4e-46 191.0 234 40.6
Pp3c3_25470 Physcomitrium patens HOM05D006539 ORTHO05D008694 9.2e-46 188.3 152 55.3
FAN02G0136 Fragaria x ananassa HOM05D006539 ORTHO05D008694 5.0e-44 182.6 120 75.0
MCO16G092 Micromonas commoda HOM05D006539 ORTHO05D008694 3.1e-41 173.3 219 41.6
CSS0026858 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 5.6e-27 125.9 142 51.4
CSS0050509 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 8.1e-26 122.1 152 48.0
MD11G1144500 Malus domestica HOM05D006539 ORTHO05D008694 1.8e-25 120.9 182 40.1
HPP92_013416 Vanilla planifolia HOM05D006539 ORTHO05D008694 1.2e-24 118.2 95 64.2
MD07G1179900 Malus domestica HOM05D006539 ORTHO05D008694 9.9e-24 115.2 105 56.2
Ciclev10013255m.g Citrus clementina HOM05D006539 ORTHO05D008694 6.4e-23 112.5 66 81.8
QL02p073354 Quercus lobata HOM05D006539 ORTHO05D008694 1.1e-22 111.7 141 53.2
QL02p073352 Quercus lobata HOM05D006539 ORTHO05D008694 2.0e-16 90.9 71 66.2
Cre09.g392950 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D044332 6.4e-15 85.9 191 31.4
MD07G1180000 Malus domestica HOM05D006539 ORTHO05D248072 3.0e-12 77.0 105 42.9
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 1.5e-08 64.7 133 30.8
MCO01G306 Micromonas commoda HOM05D003893 ORTHO05D005167 5.8e-08 62.8 142 28.9
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 5.8e-08 62.8 217 27.2
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 1.3e-07 61.6 151 31.8
MCO05G154 Micromonas commoda HOM05D006539 ORTHO05D044332 1.7e-07 61.2 218 25.2
CBR_g20364 Chara braunii HOM05D005801 ORTHO05D008555 6.4e-07 59.3 169 30.8
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 2.5e-06 57.4 155 31.0
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 2.5e-06 57.4 161 29.8
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 4.2e-06 56.6 166 24.7
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 5.5e-06 56.2 150 26.7
Duzib268G0722 Durio zibethinus HOM05D006539 ORTHO05D186223 7.1e-06 55.8 30 86.7
Cre01.g027350 Chlamydomonas reinhardtii HOM05D003893 ORTHO05D005167 9.3e-06 55.5 156 25.6


User provided reference genes

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