Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06248_v3 Cicer arietinum L. HOM05D003655 ORTHO05D004065 3.7e-146 521.5 268 100.0
Medtr6g004970 Medicago truncatula HOM05D003655 ORTHO05D004065 8.6e-111 404.1 271 80.8
Psat1g054960 Pisum sativum HOM05D003655 ORTHO05D004065 6.0e-104 381.3 272 77.2
Glyma.05G004100 Glycine max HOM05D003655 ORTHO05D004065 4.9e-98 361.7 266 74.8
Lj2g0025004 Lotus japonicus HOM05D003655 ORTHO05D004065 7.1e-97 357.8 264 74.2
Glyma.19G004000 Glycine max HOM05D003655 ORTHO05D004065 4.6e-96 355.1 270 73.3
Phvul.004G007600 Phaseolus vulgaris HOM05D003655 ORTHO05D004065 1.6e-93 346.7 265 71.7
TPR.G14089 Trifolium pratense HOM05D003655 ORTHO05D004065 1.8e-92 343.2 271 71.2
VMungo0464G0503 Vigna mungo HOM05D003655 ORTHO05D004065 6.0e-88 328.2 265 67.9
arahy.Tifrunner.gnm1.ann1.MY3LMM Arachis hypogaea HOM05D003655 ORTHO05D004065 3.3e-86 322.4 263 68.1
Lalb_Chr06g0175811 Lupinus albus HOM05D003655 ORTHO05D004065 1.5e-83 313.5 270 64.4
Ca_31040_v3 Cicer arietinum L. HOM05D003655 ORTHO05D004065 7.1e-81 304.7 152 99.3
Ca_29533_v3 Cicer arietinum L. HOM05D003655 ORTHO05D004065 3.0e-55 219.5 116 100.0
CiPaw.03G042300 Carya illinoinensis HOM05D003655 ORTHO05D004065 1.4e-52 210.7 276 48.2
Prupe.3G290100 Prunus persica HOM05D003655 ORTHO05D004065 9.4e-49 198.0 273 48.7
Atru.chr6.2366 Acer truncatum HOM05D003655 ORTHO05D004065 1.8e-47 193.7 277 46.6
Hma1.2p1_1291F.1_g273550 Hydrangea macrophylla HOM05D003655 ORTHO05D004065 3.0e-47 193.0 271 44.3
GSVIVG01032423001 Vitis vinifera HOM05D003655 ORTHO05D004065 3.0e-47 193.0 194 54.6
CSS0046674 Camellia sinensis var. sinensis HOM05D003655 ORTHO05D004065 3.9e-47 192.6 266 46.2
CSS0034547 Camellia sinensis var. sinensis HOM05D003655 ORTHO05D004065 6.7e-47 191.8 266 46.2
Rhsim08G0051400 Rhododendron simsii HOM05D003655 ORTHO05D004065 1.1e-46 191.0 276 43.5
Ciclev10014173m.g Citrus clementina HOM05D003655 ORTHO05D004065 2.8e-45 186.4 274 43.4
CSS0048500 Camellia sinensis var. sinensis HOM05D003655 ORTHO05D004065 6.3e-45 185.3 243 45.3
COL.COLO4_29094 Corchorus olitorius HOM05D003655 ORTHO05D004065 6.3e-45 185.3 274 42.7
MD09G1028400 Malus domestica HOM05D003655 ORTHO05D004065 1.8e-44 183.7 269 44.6
RcHm_v2.0_Chr2g0173051 Rosa chinensis HOM05D003655 ORTHO05D004065 1.8e-44 183.7 270 43.7
vmacro18276 Vaccinium macrocarpon HOM05D003655 ORTHO05D004065 5.3e-44 182.2 282 40.4
Actinidia35766 Actinidia chinensis HOM05D003655 ORTHO05D004065 7.0e-44 181.8 249 46.6
Dinv35101 Davidia involucrata HOM05D003655 ORTHO05D004065 1.5e-43 180.6 266 44.7
Manes.15G166100 Manihot esculenta HOM05D003655 ORTHO05D004065 2.6e-43 179.9 293 43.7
Thecc.04G015700 Theobroma cacao HOM05D003655 ORTHO05D004065 5.9e-43 178.7 278 43.2
FAN14G5704 Fragaria x ananassa HOM05D003655 ORTHO05D004065 1.0e-42 177.9 269 43.5
MD17G1029900 Malus domestica HOM05D003655 ORTHO05D004065 1.0e-42 177.9 274 44.9
Potri.001G351532 Populus trichocarpa HOM05D003655 ORTHO05D004065 1.0e-42 177.9 277 45.5
FAN02G0206 Fragaria x ananassa HOM05D003655 ORTHO05D004065 1.3e-42 177.6 268 43.3
Cpa.g.sc108.56 Carica papaya HOM05D003655 ORTHO05D004065 1.7e-42 177.2 278 43.5
Sabra16G0231200 Salix brachista HOM05D003655 ORTHO05D004065 1.7e-42 177.2 276 44.9
FvH4_6g51350 Fragaria vesca HOM05D003655 ORTHO05D004065 1.4e-41 174.1 269 43.1
Duzib264G1220 Durio zibethinus HOM05D003655 ORTHO05D004065 2.5e-41 173.3 276 41.7
Potri.017G072100 Populus trichocarpa HOM05D003655 ORTHO05D004065 2.5e-41 173.3 262 46.6
FAN05G2840 Fragaria x ananassa HOM05D003655 ORTHO05D004065 3.2e-41 172.9 263 43.7
Haze_14727 Corylus avellana HOM05D003655 ORTHO05D004065 4.2e-41 172.6 273 42.5
Duzib187G1135 Durio zibethinus HOM05D003655 ORTHO05D004065 4.2e-41 172.6 277 42.6
TWI56G0063 Tripterygium wilfordii HOM05D003655 ORTHO05D004065 5.5e-41 172.2 277 40.4
Gohir.D04G057000 Gossypium hirsutum HOM05D003655 ORTHO05D004065 9.4e-41 171.4 276 40.9
Gorai.012G063700 Gossypium raimondii HOM05D003655 ORTHO05D004065 1.2e-40 171.0 276 40.9
Manes.17G115600 Manihot esculenta HOM05D003655 ORTHO05D004065 2.1e-40 170.2 291 41.2
FAN09G1146 Fragaria x ananassa HOM05D003655 ORTHO05D004065 6.1e-40 168.7 262 42.7
TAR629G1826 Trochodendron aralioides HOM05D003655 ORTHO05D004065 1.0e-39 167.9 293 42.7
Gohir.A05G356200 Gossypium hirsutum HOM05D003655 ORTHO05D004065 1.8e-39 167.2 276 40.2
Cc07_g01820 Coffea canephora HOM05D003655 ORTHO05D004065 6.7e-39 165.2 284 40.5
QL02p075116 Quercus lobata HOM05D003655 ORTHO05D004065 5.7e-38 162.2 316 38.0
Gorai.006G032800 Gossypium raimondii HOM05D003655 ORTHO05D004065 6.3e-37 158.7 277 40.1
MBI10_g00730_MAGBIO Magnolia biondii HOM05D003655 ORTHO05D004065 1.1e-36 157.9 282 41.8
Sc03g0007560 Simmondsia chinensis HOM05D003655 ORTHO05D004065 1.8e-36 157.1 223 42.2
Gohir.D09G028200 Gossypium hirsutum HOM05D003655 ORTHO05D004065 1.6e-35 154.1 277 39.4
Gohir.A09G028600 Gossypium hirsutum HOM05D003655 ORTHO05D004065 2.0e-35 153.7 277 39.4
Lj4C88T15 Lonicera japonica HOM05D003655 ORTHO05D004065 4.5e-35 152.5 296 38.2
DCAR_011248 Daucus carota HOM05D003655 ORTHO05D004065 1.3e-34 151.0 280 38.6
Lj4A88G37 Lonicera japonica HOM05D003655 ORTHO05D004065 1.3e-34 151.0 268 38.4
CANSAT64G1680 Cannabis sativa HOM05D003655 ORTHO05D004065 2.2e-34 150.2 277 39.4
Gohir.D11G070750 Gossypium hirsutum HOM05D003655 ORTHO05D004065 5.0e-34 149.1 264 39.4
ECA238G4588 Erigeron canadensis HOM05D003655 ORTHO05D004065 2.5e-33 146.7 254 39.0
PGSC0003DMG400012599 Solanum tuberosum HOM05D003655 ORTHO05D004065 7.2e-33 145.2 192 43.2
Peaxi162Scf00129g01426 Petunia axillaris HOM05D003655 ORTHO05D004065 9.4e-33 144.8 194 44.8
AUR62023138 Chenopodium quinoa HOM05D003655 ORTHO05D004065 2.1e-32 143.7 275 37.8
Sopen02g031230 Solanum pennellii HOM05D003655 ORTHO05D004065 3.6e-32 142.9 192 42.7
Sopen02g031240 Solanum pennellii HOM05D003655 ORTHO05D004065 3.6e-32 142.9 192 42.7
Gohir.A07G222600 Gossypium hirsutum HOM05D003655 ORTHO05D004065 6.1e-32 142.1 233 39.1
Solyc02g086510.4 Solanum lycopersicum HOM05D003655 ORTHO05D004065 1.4e-31 141.0 192 42.7
Nitab4.5_0000419g0080 Nicotiana tabacum HOM05D003655 ORTHO05D004065 2.3e-31 140.2 225 39.6
Gohir.D07G229300 Gossypium hirsutum HOM05D003655 ORTHO05D004065 5.2e-31 139.0 235 38.7
Hund16251 Selenicereus undatus HOM05D003655 ORTHO05D004065 5.2e-31 139.0 229 39.3
Gorai.001G264400 Gossypium raimondii HOM05D003655 ORTHO05D004065 6.8e-31 138.7 235 38.7
Nn4g22660 Nelumbo nucifera HOM05D003655 ORTHO05D004065 1.2e-30 137.9 292 36.0
Oeu063478.1 Olea europaea HOM05D003655 ORTHO05D004065 2.6e-30 136.7 229 38.0
TAR622G0533 Trochodendron aralioides HOM05D003655 ORTHO05D004065 4.4e-30 136.0 219 41.1
HanXRQChr14g0450511 Helianthus annuus HOM05D003655 ORTHO05D004065 5.7e-30 135.6 250 38.0
Nitab4.5_0002385g0010 Nicotiana tabacum HOM05D003655 ORTHO05D004065 7.5e-30 135.2 192 42.2
PGR083G1229 Punica granatum HOM05D003655 ORTHO05D004065 1.3e-29 134.4 245 39.2
PSO063G4513 Papaver somniferum HOM05D003655 ORTHO05D004065 1.7e-29 134.0 188 42.0
Eucgr.I01752 Eucalyptus grandis HOM05D003655 ORTHO05D004065 2.2e-29 133.7 266 36.1
ATR0568G013 Amborella trichopoda HOM05D003655 ORTHO05D004065 2.8e-29 133.3 243 38.7
CiPaw.04G028000 Carya illinoinensis HOM05D003655 ORTHO05D004065 2.8e-29 133.3 194 43.3
PSO832G3537 Papaver somniferum HOM05D003655 ORTHO05D004065 3.7e-29 132.9 287 34.5
MSTRG.24033 Avicennia marina HOM05D003655 ORTHO05D004065 1.1e-28 131.3 257 37.0
Lsat_1_v5_gn_2_91520 Lactuca sativa HOM05D003655 ORTHO05D004065 1.1e-28 131.3 235 39.6
PGR142G1836 Punica granatum HOM05D003655 ORTHO05D004065 1.1e-28 131.3 274 37.2
Peaxi162Scf00700g00429 Petunia axillaris HOM05D003655 ORTHO05D004065 1.8e-28 130.6 242 37.2
HanXRQChr07g0198951 Helianthus annuus HOM05D003655 ORTHO05D004065 3.1e-28 129.8 196 41.8
Migut.H00084 Erythranthe guttata HOM05D003655 ORTHO05D004065 3.5e-27 126.3 245 38.4
Lsat_1_v5_gn_4_183501 Lactuca sativa HOM05D003655 ORTHO05D004065 3.5e-27 126.3 260 36.5
Solyc12g035250.3 Solanum lycopersicum HOM05D003655 ORTHO05D004065 3.5e-27 126.3 198 40.4
BraA06t27015Z Brassica rapa HOM05D003655 ORTHO05D004065 4.5e-27 125.9 278 35.3
EL10Ac2g04412 Beta vulgaris HOM05D003655 ORTHO05D004065 5.9e-27 125.6 253 34.4
Sopen12g014870 Solanum pennellii HOM05D003655 ORTHO05D004065 5.9e-27 125.6 220 37.3
PGSC0003DMG400004231 Solanum tuberosum HOM05D003655 ORTHO05D004065 5.9e-27 125.6 198 39.9
Ah.10g038310 Amaranthus hybridus HOM05D003655 ORTHO05D004065 7.7e-27 125.2 233 38.2
AUR62009456 Chenopodium quinoa HOM05D003655 ORTHO05D004065 1.3e-26 124.4 304 33.6
HanXRQChr09g0255101 Helianthus annuus HOM05D003655 ORTHO05D004065 1.3e-26 124.4 255 38.0
Actinidia39401 Actinidia chinensis HOM05D003655 ORTHO05D004065 1.7e-26 124.0 262 37.8
Nn3g16761 Nelumbo nucifera HOM05D003655 ORTHO05D004065 2.9e-26 123.2 280 35.7
A06p40940 Brassica napus HOM05D003655 ORTHO05D004065 1.1e-25 121.3 278 33.5
CARHR149170 Cardamine hirsuta HOM05D003655 ORTHO05D004065 1.1e-25 121.3 202 40.6
SGA_v2.0_scaffold135G34898 Striga asiatica HOM05D003655 ORTHO05D004065 1.1e-25 121.3 256 37.1
THA.LOC104805377 Tarenaya hassleriana HOM05D003655 ORTHO05D004065 1.1e-25 121.3 220 37.7
C07p36880 Brassica napus HOM05D003655 ORTHO05D004065 4.2e-25 119.4 278 34.5
BolC7t44200H Brassica oleracea HOM05D003655 ORTHO05D004065 4.2e-25 119.4 278 34.5
SalBow6G0256 Salvia bowleyana HOM05D003655 ORTHO05D004065 7.2e-25 118.6 188 37.8
CDE04G0669 Ceratophyllum demersum HOM05D003655 ORTHO05D004065 1.6e-24 117.5 179 43.0
MSTRG.3149 Avicennia marina HOM05D003655 ORTHO05D004065 2.7e-24 116.7 280 33.9
AT3G27700 Arabidopsis thaliana HOM05D003655 ORTHO05D004065 3.6e-24 116.3 189 39.7
Thhalv10003632m.g Eutrema salsugineum HOM05D003655 ORTHO05D004065 1.0e-23 114.8 267 35.6
Nitab4.5_0006802g0070 Nicotiana tabacum HOM05D003655 ORTHO05D004065 1.8e-23 114.0 152 42.1
Actinidia36106 Actinidia chinensis HOM05D003655 ORTHO05D004065 2.3e-23 113.6 121 56.2
BcaC03g17479 Brassica carinata HOM05D003655 ORTHO05D004065 3.0e-23 113.2 274 33.2
Aa31LG2G4970 Aethionema arabicum HOM05D003655 ORTHO05D004065 5.2e-23 112.5 207 38.2
AL5G17140 Arabidopsis lyrata HOM05D003655 ORTHO05D004065 5.2e-23 112.5 189 39.2
A02p35600 Brassica napus HOM05D003655 ORTHO05D004065 5.2e-23 112.5 245 34.3
BraA02t08562Z Brassica rapa HOM05D003655 ORTHO05D004065 5.2e-23 112.5 245 34.3
C02p54430 Brassica napus HOM05D003655 ORTHO05D004065 6.8e-23 112.1 271 32.8
BolC2t11504H Brassica oleracea HOM05D003655 ORTHO05D004065 6.8e-23 112.1 271 32.8
Sabra17G0060300 Salix brachista HOM05D003655 ORTHO05D004065 6.8e-23 112.1 277 33.9
CDE06G2242 Ceratophyllum demersum HOM05D003655 ORTHO05D004065 1.2e-22 111.3 254 34.6
Nitab4.5_0002682g0090 Nicotiana tabacum HOM05D003655 ORTHO05D004065 1.2e-22 111.3 213 35.2
SGA_v2.0_scaffold481G52311 Striga asiatica HOM05D003655 ORTHO05D004065 1.5e-22 110.9 235 37.4
Sed0000390 Sechium edule HOM05D003655 ORTHO05D004065 2.6e-22 110.2 250 32.8
Aa31LG2G4980 Aethionema arabicum HOM05D003655 ORTHO05D004065 7.5e-22 108.6 218 37.6
Ah.16g100890 Amaranthus hybridus HOM05D003655 ORTHO05D004065 2.2e-21 107.1 250 33.6
BcaB07g30148 Brassica carinata HOM05D003655 ORTHO05D004065 4.8e-21 105.9 256 32.4
Os04g0394300 Oryza sativa ssp. japonica HOM05D003655 ORTHO05D004065 6.3e-21 105.5 192 38.0
Sp2g16820 Schrenkiella parvula HOM05D003655 ORTHO05D004065 8.3e-21 105.1 268 31.3
Carub.0005s0625 Capsella rubella HOM05D003655 ORTHO05D004065 1.8e-20 104.0 276 32.2
SEGI_17646 Sequoiadendron giganteum HOM05D003655 ORTHO05D004065 3.1e-20 103.2 161 37.9
unitig_0.g1601 Utricularia gibba HOM05D003655 ORTHO05D004065 5.4e-20 102.4 249 33.3
CsaV3_3G042720 Cucumis sativus L. HOM05D003655 ORTHO05D004065 7.0e-20 102.1 241 32.0
unitig_748.g6986 Utricularia gibba HOM05D003655 ORTHO05D004065 2.7e-19 100.1 202 37.6
THA.LOC104823948 Tarenaya hassleriana HOM05D003655 ORTHO05D004065 3.5e-19 99.8 281 31.7
Sopen01g024710 Solanum pennellii HOM05D003655 ORTHO05D004065 1.0e-18 98.2 172 36.0
MELO3C009984.2 Cucumis melo HOM05D003655 ORTHO05D004065 2.9e-18 96.7 241 30.3
Sed0015855 Sechium edule HOM05D003655 ORTHO05D004065 5.0e-18 95.9 216 32.4
Zm00001eb085110 Zea mays HOM05D003655 ORTHO05D004065 8.6e-18 95.1 212 35.8
ClCG10G013970 Citrullus lanatus HOM05D003655 ORTHO05D004065 4.2e-17 92.8 235 31.5
SEGI_07755 Sequoiadendron giganteum HOM05D003655 ORTHO05D004065 2.8e-16 90.1 199 31.7
SMO367G0495 Selaginella moellendorffii HOM05D003655 ORTHO05D004065 8.9e-15 85.1 153 37.3
Pp3c2_22950 Physcomitrium patens HOM05D003655 ORTHO05D004065 2.6e-14 83.6 237 29.1
Mapoly0078s0024 Marchantia polymorpha HOM05D003655 ORTHO05D004065 1.3e-13 81.3 251 28.3
Pp3c2_21410 Physcomitrium patens HOM05D003655 ORTHO05D004065 1.7e-13 80.9 176 32.4
FAN05G1583 Fragaria x ananassa HOM05D003655 ORTHO05D004065 2.8e-13 80.1 122 46.7
Actinidia25101 Actinidia chinensis HOM05D003655 ORTHO05D004065 2.4e-12 77.0 105 41.0
Pp3c1_17760 Physcomitrium patens HOM05D003655 ORTHO05D004065 2.4e-12 77.0 239 28.9
Gohir.A11G066633 Gossypium hirsutum HOM05D003655 ORTHO05D004065 1.2e-11 74.7 111 44.1
Gorai.007G075900 Gossypium raimondii HOM05D003655 ORTHO05D004065 3.5e-11 73.2 112 42.0
Peaxi162Scf00417g00004 Petunia axillaris HOM05D003655 ORTHO05D004065 2.9e-10 70.1 81 42.0
Solyc01g058690.1 Solanum lycopersicum HOM05D003655 ORTHO05D004065 2.1e-08 63.9 73 39.7
Sopen01g024690 Solanum pennellii HOM05D000006 ORTHO05D000695 2.1e-08 63.9 78 39.7
Prupe.3G289600 Prunus persica HOM05D003655 ORTHO05D004065 1.0e-07 61.6 80 55.0
Pp3c1_20440 Physcomitrium patens HOM05D003655 ORTHO05D004065 1.4e-07 61.2 139 32.4


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