Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 2.2e-151 538.9 269 100.0
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 2.3e-39 166.8 107 82.2
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 1.2e-38 164.5 107 83.2
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 1.3e-37 161.0 105 81.0
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 1.8e-36 157.1 107 75.7
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 2.4e-36 156.8 107 76.6
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 7.0e-36 155.2 137 67.2
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 2.9e-34 149.8 148 58.1
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 1.0e-31 141.4 99 70.7
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 1.8e-31 140.6 99 69.7
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 1.2e-30 137.9 98 71.4
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 6.3e-29 132.1 98 69.4
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 1.8e-28 130.6 92 72.8
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 9.2e-28 128.3 98 66.3
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 2.7e-27 126.7 96 69.8
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 3.5e-27 126.3 101 68.3
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 4.5e-27 125.9 140 53.6
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 1.3e-26 124.4 109 63.3
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 2.3e-26 123.6 92 70.7
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 2.3e-26 123.6 95 68.4
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 2.3e-26 123.6 95 68.4
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 3.8e-26 122.9 92 69.6
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 3.8e-26 122.9 97 66.0
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 6.6e-26 122.1 92 70.7
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 8.6e-26 121.7 92 70.7
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 8.6e-26 121.7 121 52.1
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 8.6e-26 121.7 95 67.4
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 1.1e-25 121.3 97 68.0
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 1.5e-25 120.9 92 67.4
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 1.5e-25 120.9 92 70.7
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.5e-25 120.9 92 67.4
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.5e-25 120.9 92 67.4
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 2.5e-25 120.2 100 65.0
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 3.3e-25 119.8 105 61.9
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 4.3e-25 119.4 124 54.0
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 4.3e-25 119.4 92 65.2
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 4.3e-25 119.4 104 60.6
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 9.5e-25 118.2 92 66.3
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 9.5e-25 118.2 92 66.3
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 1.2e-24 117.9 98 63.3
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 1.6e-24 117.5 92 67.4
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 2.1e-24 117.1 98 61.2
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 2.8e-24 116.7 92 68.5
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 2.8e-24 116.7 92 68.5
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 2.8e-24 116.7 98 61.2
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 2.8e-24 116.7 92 67.4
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 2.8e-24 116.7 92 69.6
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 3.6e-24 116.3 104 60.6
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 8.0e-24 115.2 98 58.2
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 8.0e-24 115.2 92 66.3
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 8.0e-24 115.2 101 58.4
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.0e-23 114.8 98 58.2
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 1.8e-23 114.0 101 61.4
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 2.3e-23 113.6 92 64.1
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 2.3e-23 113.6 92 65.2
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 2.3e-23 113.6 92 67.4
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 2.3e-23 113.6 92 65.2
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 3.0e-23 113.2 98 61.2
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 3.0e-23 113.2 99 61.6
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 3.0e-23 113.2 98 57.1
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 3.0e-23 113.2 123 48.8
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 3.0e-23 113.2 99 60.6
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 4.0e-23 112.8 98 63.3
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 5.2e-23 112.5 92 64.1
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 8.9e-23 111.7 95 63.2
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 1.2e-22 111.3 98 57.1
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 1.2e-22 111.3 96 60.4
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 1.5e-22 110.9 96 60.4
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 2.0e-22 110.5 92 60.9
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 2.0e-22 110.5 123 48.0
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 2.0e-22 110.5 92 63.0
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 3.4e-22 109.8 96 59.4
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 3.4e-22 109.8 92 62.0
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 3.4e-22 109.8 92 62.0
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 3.4e-22 109.8 92 62.0
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 4.4e-22 109.4 100 59.0
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 4.4e-22 109.4 94 62.8
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 7.5e-22 108.6 92 60.9
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 9.8e-22 108.2 96 56.2
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 9.8e-22 108.2 98 57.1
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 9.8e-22 108.2 98 56.1
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 9.8e-22 108.2 98 56.1
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 9.8e-22 108.2 98 56.1
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 2.2e-21 107.1 98 56.1
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 3.7e-21 106.3 92 59.8
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 4.9e-21 105.9 98 57.1
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 4.9e-21 105.9 98 56.1
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 6.4e-21 105.5 98 56.1
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 8.3e-21 105.1 98 55.1
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.1e-20 104.8 77 66.2
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.1e-20 104.8 77 66.2
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 1.4e-20 104.4 98 55.1
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 1.8e-20 104.0 98 54.1
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 1.8e-20 104.0 92 58.7
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 2.4e-20 103.6 96 55.2
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 4.1e-20 102.8 96 59.4
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 4.1e-20 102.8 98 56.1
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 7.0e-20 102.1 99 51.5
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 9.2e-20 101.7 92 55.4
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 3.5e-19 99.8 98 53.1
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.0e-18 98.2 146 41.8
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 1.3e-18 97.8 70 68.6
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 1.3e-18 97.8 92 57.6
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 1.7e-18 97.4 89 56.2
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 1.7e-18 97.4 96 49.0
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 5.0e-18 95.9 130 45.4
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 8.6e-18 95.1 117 47.0
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 5.6e-17 92.4 92 52.2
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 7.3e-17 92.0 92 47.8
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 6.2e-16 89.0 71 62.0
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 1.8e-15 87.4 95 54.7
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 4.0e-15 86.3 73 57.5
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 8.9e-15 85.1 99 46.5
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 7.5e-14 82.0 92 46.7
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 4.1e-12 76.3 85 45.9
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 5.0e-10 69.3 72 47.2
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 1.5e-09 67.8 103 44.7
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 1.1e-07 61.6 57 56.1


User provided reference genes

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