Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 4.2e-162 574.7 308 100.0
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 2.9e-70 269.6 186 83.9
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 5.0e-70 268.9 186 83.3
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 1.2e-68 264.2 187 79.7
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 5.1e-67 258.8 187 75.9
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 1.7e-65 253.8 185 77.3
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 1.7e-65 253.8 193 75.6
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 3.7e-65 252.7 189 72.5
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 2.4e-64 250.0 185 76.2
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 3.5e-63 246.1 190 74.7
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 1.6e-60 237.3 190 71.1
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 3.0e-59 233.0 193 68.9
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 5.2e-59 232.3 189 71.4
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 6.7e-59 231.9 240 57.9
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 1.7e-57 227.3 191 67.5
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 2.8e-57 226.5 191 71.7
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 2.8e-57 226.5 190 67.9
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 2.8e-57 226.5 189 67.2
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 6.3e-57 225.3 191 66.5
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 8.2e-57 224.9 188 66.5
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 8.2e-57 224.9 188 66.5
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 7.0e-56 221.9 190 66.3
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 7.0e-56 221.9 191 66.0
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 1.3e-54 217.6 191 63.4
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 1.7e-54 217.2 191 64.9
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 2.9e-54 216.5 188 69.1
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 2.9e-54 216.5 190 64.7
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.5e-53 213.4 190 65.8
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 2.5e-53 213.4 189 63.5
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 2.5e-53 213.4 185 63.8
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 3.2e-53 213.0 191 72.3
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 1.6e-52 210.7 192 68.2
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 2.1e-52 210.3 194 62.4
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 1.0e-51 208.0 190 64.2
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 4.0e-51 206.1 191 70.7
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 5.2e-51 205.7 189 62.4
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 1.3e-49 201.1 190 62.6
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 1.3e-49 201.1 190 62.6
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 1.3e-49 201.1 190 60.0
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 1.7e-49 200.7 192 59.4
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 2.2e-49 200.3 192 59.4
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 4.8e-49 199.1 197 62.4
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 6.3e-49 198.7 190 61.6
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 8.3e-49 198.4 178 66.9
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 4.1e-48 196.1 193 63.2
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 5.9e-47 192.2 191 67.0
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 1.0e-46 191.4 194 58.8
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 1.3e-46 191.0 191 60.2
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 2.2e-46 190.3 189 59.8
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 2.9e-46 189.9 189 61.4
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 6.5e-46 188.7 190 60.5
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 8.5e-46 188.3 190 56.3
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 2.5e-45 186.8 174 69.5
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 3.2e-45 186.4 182 61.5
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 4.2e-45 186.0 193 64.2
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 5.5e-45 185.7 181 59.7
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 9.4e-45 184.9 186 57.5
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 9.4e-45 184.9 190 57.4
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 2.1e-44 183.7 190 63.7
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 3.6e-44 183.0 189 57.1
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 4.7e-44 182.6 199 59.8
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 6.1e-44 182.2 189 58.2
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 1.4e-43 181.0 187 56.1
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 1.8e-43 180.6 192 57.8
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 6.8e-43 178.7 183 60.7
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 8.8e-43 178.3 187 57.8
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 1.2e-42 177.9 189 58.2
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 1.5e-42 177.6 189 56.6
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 2.6e-42 176.8 193 57.0
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 2.6e-42 176.8 192 55.7
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 3.4e-42 176.4 188 54.8
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 3.4e-42 176.4 197 53.3
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 7.5e-42 175.3 189 59.3
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 3.7e-41 172.9 191 54.5
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 1.4e-40 171.0 194 55.2
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 1.4e-40 171.0 195 56.4
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 3.1e-40 169.9 195 54.9
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 5.4e-40 169.1 188 55.9
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 3.5e-39 166.4 188 53.7
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 1.1e-37 161.4 167 56.3
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 1.1e-37 161.4 185 51.9
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 1.1e-37 161.4 185 51.9
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.9e-37 160.6 186 52.7
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 2.5e-37 160.2 191 53.4
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 4.2e-37 159.5 192 53.1
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 4.2e-37 159.5 192 52.6
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 7.2e-37 158.7 182 53.8
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 7.2e-37 158.7 180 57.2
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 9.5e-37 158.3 186 51.6
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 8.0e-36 155.2 186 50.5
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 8.0e-36 155.2 190 50.0
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 6.8e-35 152.1 188 53.7
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 6.8e-35 152.1 184 51.6
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 2.0e-34 150.6 188 50.5
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 3.4e-34 149.8 192 55.7
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 2.8e-33 146.7 190 55.3
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 9.2e-32 141.7 211 46.4
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 1.2e-31 141.4 202 45.0
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 2.7e-31 140.2 170 50.6
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 5.9e-31 139.0 190 46.3
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 1.7e-30 137.5 145 57.9
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 2.9e-30 136.7 189 54.0
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 2.9e-30 136.7 197 46.7
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 2.9e-30 136.7 197 46.7
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 1.1e-29 134.8 190 44.7
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 2.5e-29 133.7 147 55.8
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 9.5e-29 131.7 201 48.3
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 1.2e-28 131.3 218 48.2
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 2.8e-28 130.2 188 46.8
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 4.7e-28 129.4 144 55.6
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 6.1e-28 129.0 192 44.8
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 1.4e-27 127.9 187 44.9
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 3.1e-27 126.7 192 43.8
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.2e-25 120.6 147 53.7
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 2.7e-23 113.6 166 48.8
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 4.6e-23 112.8 194 41.2
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 2.3e-22 110.5 115 57.4
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 6.6e-22 109.0 82 70.7
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.5e-21 107.8 82 69.5
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 1.9e-21 107.5 74 77.0
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 3.3e-21 106.7 72 76.4
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 9.5e-21 105.1 109 56.9
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 4.7e-20 102.8 139 50.4
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 5.2e-19 99.4 147 44.2
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 3.4e-18 96.7 59 83.1
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 9.8e-18 95.1 146 46.6
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 2.2e-17 94.0 157 50.3
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 3.7e-17 93.2 81 58.0
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 7.0e-16 89.0 74 60.8
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.0e-14 85.1 120 50.0
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 1.0e-14 85.1 96 53.1
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 8.9e-11 72.0 63 66.7
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 1.5e-10 71.2 74 51.4
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 2.9e-09 67.0 132 40.9
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 3.7e-09 66.6 82 52.4
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 1.4e-08 64.7 176 30.7
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 3.2e-08 63.5 85 45.9
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 6.0e-07 59.3 84 47.6
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 8.6e-06 55.5 76 50.0


User provided reference genes

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