Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 1.7e-272 942.2 508 100.0
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 1.6e-195 686.4 503 78.1
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 5.3e-186 654.8 474 77.4
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 2.1e-182 642.9 536 71.8
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 2.0e-180 636.3 517 72.9
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 4.8e-179 631.7 439 80.6
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 2.2e-176 622.9 522 71.1
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 1.6e-174 616.7 531 70.4
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 1.8e-170 603.2 607 62.6
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 2.7e-166 589.3 587 63.7
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 1.4e-165 587.0 587 63.7
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 1.6e-137 493.8 463 65.7
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 1.5e-135 487.3 495 63.0
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 6.2e-134 481.9 575 56.2
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 5.8e-132 475.3 465 62.2
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 2.2e-131 473.4 467 63.4
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 3.7e-131 472.6 457 64.8
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 2.4e-130 469.9 463 62.2
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 4.1e-130 469.2 475 62.3
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 4.1e-130 469.2 450 63.3
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 9.2e-130 468.0 551 55.4
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 1.2e-129 467.6 530 56.4
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 7.8e-129 464.9 458 63.3
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 1.5e-127 460.7 455 61.3
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 1.9e-127 460.3 459 62.7
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 4.0e-125 452.6 459 63.0
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 4.0e-125 452.6 592 53.4
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 6.8e-125 451.8 451 62.7
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 1.2e-124 451.1 471 61.6
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 1.2e-124 451.1 553 50.1
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 4.4e-124 449.1 464 61.4
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 4.4e-124 449.1 454 61.7
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 1.3e-123 447.6 560 54.3
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 1.3e-123 447.6 493 59.4
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 6.4e-123 445.3 455 62.9
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 8.3e-123 444.9 450 61.3
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 1.1e-122 444.5 469 60.8
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.4e-122 444.1 448 64.1
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 2.7e-121 439.9 509 56.0
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.7e-120 437.2 450 62.7
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 2.3e-120 436.8 453 61.8
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 3.0e-120 436.4 464 60.3
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 5.1e-120 435.6 468 58.8
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 8.6e-120 434.9 531 54.4
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 1.5e-119 434.1 457 60.8
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 1.2e-118 431.0 471 58.6
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 2.1e-118 430.3 553 53.3
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 2.8e-118 429.9 563 51.2
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 6.2e-118 428.7 527 56.5
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 1.1e-117 427.9 458 61.4
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 1.1e-117 427.9 457 60.4
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 5.2e-117 425.6 510 55.1
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 2.0e-116 423.7 546 54.4
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 4.4e-116 422.5 513 56.9
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 4.4e-116 422.5 460 58.7
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 9.9e-116 421.4 450 61.1
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 6.4e-115 418.7 448 61.4
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 1.9e-114 417.2 456 59.9
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 3.2e-114 416.4 531 53.3
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 1.6e-113 414.1 450 59.8
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 2.1e-113 413.7 465 58.5
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 2.7e-113 413.3 489 58.3
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 3.5e-113 412.9 447 59.7
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 1.7e-112 410.6 477 57.7
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 1.5e-111 407.5 477 52.4
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 4.8e-110 402.5 526 52.9
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 4.0e-109 399.4 459 55.8
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 3.4e-108 396.4 541 52.1
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 1.7e-107 394.0 469 57.6
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 2.2e-107 393.7 458 55.5
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 1.1e-106 391.3 541 51.4
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 7.1e-106 388.7 486 53.9
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 7.1e-106 388.7 466 57.3
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 2.1e-105 387.1 479 54.9
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 5.6e-103 379.0 526 50.4
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 1.3e-102 377.9 465 55.1
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 1.6e-102 377.5 485 54.0
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 6.9e-101 372.1 464 54.1
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 4.5e-100 369.4 464 54.7
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 5.8e-100 369.0 460 54.1
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 9.9e-100 368.2 446 55.4
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 4.2e-98 362.8 444 58.1
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 4.2e-98 362.8 555 49.0
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 7.1e-98 362.1 503 50.7
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 2.3e-96 357.1 450 54.2
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 1.5e-95 354.4 453 53.2
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 1.6e-94 350.9 450 53.8
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 3.1e-93 346.7 428 56.3
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 3.4e-92 343.2 402 57.5
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 2.8e-86 323.6 474 50.8
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 2.9e-83 313.5 571 39.9
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 6.5e-83 312.4 355 60.8
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 2.3e-80 303.9 529 44.2
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 2.3e-80 303.9 529 44.2
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 2.2e-78 297.4 626 42.0
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 1.1e-77 295.0 542 43.7
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.1e-53 215.3 231 51.5
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 4.2e-50 203.4 211 55.0
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 3.4e-47 193.7 258 44.2
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 6.3e-46 189.5 265 43.4
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 1.1e-45 188.7 351 46.4
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 4.1e-45 186.8 209 53.1
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 1.2e-44 185.3 175 61.1
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 1.1e-42 178.7 159 64.2
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 1.0e-40 172.2 150 64.7
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.4e-37 161.8 223 44.4
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 3.5e-36 157.1 282 40.4
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 1.5e-34 151.8 95 77.9
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 1.0e-32 145.6 110 70.9
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 4.0e-32 143.7 154 55.2
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 2.0e-31 141.4 82 90.2
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 2.3e-27 127.9 395 34.4
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 9.8e-23 112.5 169 45.0
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 2.9e-22 110.9 142 44.4
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 1.6e-20 105.1 333 38.4
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 2.5e-18 97.8 86 59.3
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 4.4e-15 87.0 164 40.9
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 8.3e-14 82.8 178 44.4
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 1.4e-13 82.0 251 39.4
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 5.4e-13 80.1 50 82.0
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.9e-10 71.6 84 46.4


User provided reference genes

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