Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01853_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 4.2e-116 421.4 218 100.0
Ca_01714_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 1.2e-99 366.7 205 93.7
Psat7g030440 Pisum sativum HOM05D003876 ORTHO05D004560 4.7e-83 311.6 188 87.2
TPR.G34799 Trifolium pratense HOM05D003876 ORTHO05D004560 7.6e-81 304.3 189 84.1
Medtr3g051730 Medicago truncatula HOM05D003876 ORTHO05D004560 1.1e-74 283.9 192 78.6
Lj6g0024588 Lotus japonicus HOM05D003876 ORTHO05D004560 1.2e-70 270.4 194 72.2
Lalb_Chr15g0081151 Lupinus albus HOM05D003876 ORTHO05D004560 7.3e-68 261.2 193 73.6
arahy.Tifrunner.gnm1.ann1.CB0JBU Arachis hypogaea HOM05D003876 ORTHO05D004560 1.8e-66 256.5 198 68.7
arahy.Tifrunner.gnm1.ann1.S1L982 Arachis hypogaea HOM05D003876 ORTHO05D004560 2.4e-66 256.1 198 68.7
VMungo0540G1458 Vigna mungo HOM05D003876 ORTHO05D004560 2.2e-64 249.6 194 69.1
Potri.001G423600 Populus trichocarpa HOM05D003876 ORTHO05D004560 7.1e-63 244.6 193 67.4
Haze_09664 Corylus avellana HOM05D003876 ORTHO05D004560 2.1e-62 243.0 194 66.0
Glyma.18G096800 Glycine max HOM05D003876 ORTHO05D004560 2.1e-62 243.0 186 68.8
Glyma.08G316100 Glycine max HOM05D003876 ORTHO05D004560 2.7e-62 242.7 194 67.0
CANSAT21G0957 Cannabis sativa HOM05D003876 ORTHO05D004560 8.7e-61 237.7 185 70.3
COL.COLO4_07981 Corchorus olitorius HOM05D003876 ORTHO05D004560 1.5e-60 236.9 189 67.7
vmacro22462 Vaccinium macrocarpon HOM05D003876 ORTHO05D004560 2.5e-60 236.1 192 68.2
CiPaw.11G188300 Carya illinoinensis HOM05D003876 ORTHO05D004560 3.3e-60 235.7 186 66.7
MD03G1202300 Malus domestica HOM05D003876 ORTHO05D004560 9.6e-60 234.2 184 67.9
Ciclev10007236m.g Citrus clementina HOM05D003876 ORTHO05D004560 1.6e-59 233.4 184 67.4
Atru.chr2.3354 Acer truncatum HOM05D003876 ORTHO05D004560 2.8e-59 232.6 192 66.1
Prupe.4G211600 Prunus persica HOM05D003876 ORTHO05D004560 2.8e-59 232.6 184 65.8
Dinv31299 Davidia involucrata HOM05D003876 ORTHO05D004560 1.1e-58 230.7 186 66.1
Dinv12032 Davidia involucrata HOM05D003876 ORTHO05D004560 1.4e-58 230.3 186 65.6
Gohir.D05G329600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 1.4e-58 230.3 189 65.1
Gorai.009G353000 Gossypium raimondii HOM05D003876 ORTHO05D004560 1.4e-58 230.3 189 65.1
Duzib213G0609 Durio zibethinus HOM05D003876 ORTHO05D004560 1.8e-58 229.9 189 66.7
Thecc.07G169600 Theobroma cacao HOM05D003876 ORTHO05D004560 2.4e-58 229.6 189 65.6
Lj4C311T3 Lonicera japonica HOM05D003876 ORTHO05D004560 1.7e-56 223.4 184 66.8
Hma1.2p1_1458F.1_g284750 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 2.2e-56 223.0 186 63.4
Hma1.2p1_1927F.1_g307790 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 2.9e-56 222.6 186 62.9
Cpa.g.sc25.33 Carica papaya HOM05D003876 ORTHO05D004560 6.4e-56 221.5 192 60.9
ClCG09G008390 Citrullus lanatus HOM05D003876 ORTHO05D004560 6.4e-56 221.5 186 64.5
Manes.15G088800 Manihot esculenta HOM05D003876 ORTHO05D004560 2.4e-55 219.5 182 64.8
QL11p042372 Quercus lobata HOM05D003876 ORTHO05D004560 2.4e-55 219.5 184 65.2
Rhsim03G0118500 Rhododendron simsii HOM05D003876 ORTHO05D004560 3.2e-55 219.2 184 64.7
Eucgr.F03461 Eucalyptus grandis HOM05D003876 ORTHO05D004560 4.2e-55 218.8 189 63.5
PGR031G0089 Punica granatum HOM05D003876 ORTHO05D004560 7.1e-55 218.0 176 68.8
HanXRQChr14g0456751 Helianthus annuus HOM05D003876 ORTHO05D004560 1.2e-54 217.2 197 61.9
Hund02060 Selenicereus undatus HOM05D003876 ORTHO05D004560 1.2e-54 217.2 194 61.3
CsaV3_7G026680 Cucumis sativus L. HOM05D003876 ORTHO05D004560 2.7e-54 216.1 186 62.9
Haze_08116 Corylus avellana HOM05D003876 ORTHO05D004560 3.5e-54 215.7 175 68.0
Sed0026666 Sechium edule HOM05D003876 ORTHO05D004560 3.5e-54 215.7 186 62.4
CSS0021387 Camellia sinensis var. sinensis HOM05D003876 ORTHO05D004560 1.0e-53 214.2 184 62.5
MELO3C021122.2 Cucumis melo HOM05D003876 ORTHO05D004560 1.8e-53 213.4 186 62.4
Cc02_g11170 Coffea canephora HOM05D003876 ORTHO05D004560 5.1e-53 211.8 179 65.4
TWI38G0366 Tripterygium wilfordii HOM05D003876 ORTHO05D004560 6.7e-53 211.5 194 62.9
EL10Ac4g07826 Beta vulgaris HOM05D003876 ORTHO05D004560 8.7e-53 211.1 192 60.9
FAN21G1021 Fragaria x ananassa HOM05D003876 ORTHO05D004560 1.9e-52 209.9 184 62.5
AUR62020460 Chenopodium quinoa HOM05D003876 ORTHO05D004560 3.3e-52 209.1 177 65.0
AUR62015755 Chenopodium quinoa HOM05D003876 ORTHO05D004560 4.3e-52 208.8 177 65.0
Ah.14g087580 Amaranthus hybridus HOM05D003876 ORTHO05D004560 1.3e-51 207.2 177 62.7
DCAR_015293 Daucus carota HOM05D003876 ORTHO05D004560 2.1e-51 206.5 183 62.3
ECA238G2706 Erigeron canadensis HOM05D003876 ORTHO05D004560 2.1e-51 206.5 197 59.9
Lsat_1_v5_gn_2_112761 Lactuca sativa HOM05D003876 ORTHO05D004560 2.8e-51 206.1 190 61.6
Sopen02g015700 Solanum pennellii HOM05D003876 ORTHO05D004560 3.7e-51 205.7 194 60.8
TAR626G1614 Trochodendron aralioides HOM05D003876 ORTHO05D004560 4.8e-51 205.3 176 62.5
FvH4_3g22520 Fragaria vesca HOM05D003876 ORTHO05D004560 6.2e-51 204.9 186 61.3
FAN11G2639 Fragaria x ananassa HOM05D003876 ORTHO05D004560 1.8e-50 203.4 186 60.8
RcHm_v2.0_Chr5g0039261 Rosa chinensis HOM05D003876 ORTHO05D004560 1.8e-50 203.4 184 61.4
Peaxi162Scf01227g00036 Petunia axillaris HOM05D003876 ORTHO05D004560 4.0e-50 202.2 176 65.3
SGA_v2.0_scaffold13G06370 Striga asiatica HOM05D003876 ORTHO05D004560 4.0e-50 202.2 213 58.2
FAN16G2970 Fragaria x ananassa HOM05D003876 ORTHO05D004560 1.2e-49 200.7 184 60.3
Nn1g07120 Nelumbo nucifera HOM05D003876 ORTHO05D004560 1.2e-49 200.7 192 58.3
Aa31LG5G10400 Aethionema arabicum HOM05D003876 ORTHO05D004560 1.5e-49 200.3 184 59.8
THA.LOC104817664 Tarenaya hassleriana HOM05D003876 ORTHO05D004560 2.0e-49 199.9 172 63.4
CAN.G93.17 Capsicum annuum HOM05D003876 ORTHO05D004560 4.5e-49 198.7 187 61.5
MSTRG.9162 Avicennia marina HOM05D003876 ORTHO05D004560 1.0e-48 197.6 181 63.5
SalBow4G0132 Salvia bowleyana HOM05D003876 ORTHO05D004560 4.9e-48 195.3 198 59.6
SalBow4G0850 Salvia bowleyana HOM05D003876 ORTHO05D004560 4.9e-48 195.3 198 59.6
Aqoxy1G03250 Aquilegia oxysepala HOM05D003876 ORTHO05D004560 6.5e-48 194.9 184 56.5
Migut.F01968 Erythranthe guttata HOM05D003876 ORTHO05D004560 1.4e-47 193.7 186 59.7
Sc07g0002730 Simmondsia chinensis HOM05D003876 ORTHO05D004560 1.4e-47 193.7 194 55.7
AL7G25820 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 2.5e-47 193.0 176 60.2
MBI16_g24182_MAGBIO Magnolia biondii HOM05D003876 ORTHO05D004560 1.2e-46 190.7 190 58.4
PSO675G8409 Papaver somniferum HOM05D003876 ORTHO05D004560 4.6e-46 188.7 199 54.3
Oeu042740.2 Olea europaea HOM05D003876 ORTHO05D004560 6.0e-46 188.3 179 60.3
PSO541G2928 Papaver somniferum HOM05D003876 ORTHO05D004560 6.0e-46 188.3 202 54.0
Zm00001eb070180 Zea mays HOM05D003876 ORTHO05D004560 7.9e-46 188.0 186 59.7
Migut.D01652 Erythranthe guttata HOM05D003876 ORTHO05D004560 1.0e-45 187.6 185 57.8
Sp7g24970 Schrenkiella parvula HOM05D003876 ORTHO05D004560 1.8e-45 186.8 185 57.8
AT4G27010 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 3.9e-45 185.7 176 59.1
GSVIVG01037632001 Vitis vinifera HOM05D003876 ORTHO05D004560 8.7e-45 184.5 197 56.3
CDE12G0710 Ceratophyllum demersum HOM05D003876 ORTHO05D004560 2.5e-44 183.0 176 56.2
ATR0752G176 Amborella trichopoda HOM05D003876 ORTHO05D004560 1.2e-41 174.1 179 55.9
SHI26626 Sapria himalayana HOM05D003876 ORTHO05D004560 1.7e-40 170.2 178 55.1
HPP92_009565 Vanilla planifolia HOM05D003876 ORTHO05D004560 2.2e-40 169.9 196 53.1
BolC1t02247H Brassica oleracea HOM05D003876 ORTHO05D004560 1.3e-37 160.6 187 52.4
BcaNung03573 Brassica carinata HOM05D003876 ORTHO05D004560 1.8e-37 160.2 192 51.6
C01p23130 Brassica napus HOM05D003876 ORTHO05D004560 1.1e-36 157.5 187 51.9
BcaNung03576 Brassica carinata HOM05D003876 ORTHO05D004560 7.4e-36 154.8 187 51.3
AL2G26020 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 6.3e-35 151.8 177 51.4
AT1G72270 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 1.1e-34 151.0 180 50.6
A01p18170 Brassica napus HOM05D003876 ORTHO05D004560 1.8e-34 150.2 187 50.3
BraA01t01772Z Brassica rapa HOM05D003876 ORTHO05D004560 1.8e-34 150.2 187 50.3
SEGI_05754 Sequoiadendron giganteum HOM05D003876 ORTHO05D004560 2.6e-33 146.4 181 47.0
AL1G52050 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 1.4e-29 134.0 157 48.4
Pp3c2_30140 Physcomitrium patens HOM05D003876 ORTHO05D004560 2.3e-29 133.3 177 45.8
SMO146G0332 Selaginella moellendorffii HOM05D003876 ORTHO05D004560 3.3e-28 129.4 217 37.3
Mapoly0015s0081 Marchantia polymorpha HOM05D003876 ORTHO05D004560 9.7e-28 127.9 167 43.1
Thhalv10024185m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 8.2e-27 124.8 125 56.0
AL1G51930 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 2.6e-25 119.8 185 42.2
AagrBONN_evm.TU.Sc2ySwM_362.592 Anthoceros agrestis HOM05D003876 ORTHO05D004560 1.6e-22 110.5 191 39.3
CARHR229820 Cardamine hirsuta HOM05D003876 ORTHO05D004560 2.1e-22 110.2 90 66.7
Gohir.A05G328616 Gossypium hirsutum HOM05D003876 ORTHO05D004560 1.2e-17 94.4 113 47.8
Thhalv10009735m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 2.2e-16 90.1 145 45.5
Ciclev10007833m.g Citrus clementina HOM05D003876 ORTHO05D004560 5.0e-16 89.0 66 68.2
Lj4A310T24 Lonicera japonica HOM05D003876 ORTHO05D004560 4.2e-15 85.9 110 50.0
QL08p010640 Quercus lobata HOM05D003876 ORTHO05D004560 8.0e-14 81.6 89 55.1
CBR_g48672 Chara braunii HOM05D003876 ORTHO05D004560 4.4e-12 75.9 185 29.2
QL10p036392 Quercus lobata HOM05D003876 ORTHO05D004560 4.8e-11 72.4 90 51.1
Os04g0625350 Oryza sativa ssp. japonica HOM05D003876 ORTHO05D004560 1.0e-08 64.7 74 54.1


User provided reference genes

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