Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01794_v3 Cicer arietinum L. HOM05D002586 ORTHO05D007009 1.3e-160 569.7 295 100.0
Phvul.005G087700 Phaseolus vulgaris HOM05D002586 ORTHO05D007009 7.5e-92 341.3 291 67.4
Medtr2g081225 Medicago truncatula HOM05D002586 ORTHO05D007009 1.7e-91 340.1 298 67.4
Lj3g0014478 Lotus japonicus HOM05D002586 ORTHO05D007009 8.3e-91 337.8 300 66.3
VMungo1080G0571 Vigna mungo HOM05D002586 ORTHO05D007009 1.2e-89 334.0 293 67.6
TPR.G32856 Trifolium pratense HOM05D002586 ORTHO05D007009 2.8e-86 322.8 293 64.5
Glyma.13G282700 Glycine max HOM05D002586 ORTHO05D007009 1.9e-79 300.1 296 64.2
Glyma.12G217900 Glycine max HOM05D002586 ORTHO05D007009 2.1e-78 296.6 292 60.6
Lalb_Chr01g0017111 Lupinus albus HOM05D002586 ORTHO05D007009 4.6e-73 278.9 295 59.0
Haze_09552 Corylus avellana HOM05D002586 ORTHO05D007009 3.6e-70 269.2 298 55.7
QL08p017150 Quercus lobata HOM05D002586 ORTHO05D007009 2.0e-68 263.5 301 54.2
Psat5g247040 Pisum sativum HOM05D002586 ORTHO05D007009 3.8e-67 259.2 201 69.7
Prupe.4G192400 Prunus persica HOM05D002586 ORTHO05D007009 1.3e-64 250.8 314 52.2
CiPaw.11G178700 Carya illinoinensis HOM05D002586 ORTHO05D007009 8.7e-64 248.1 306 50.0
RcHm_v2.0_Chr5g0036281 Rosa chinensis HOM05D002586 ORTHO05D007009 8.7e-64 248.1 302 51.3
MD03G1217000 Malus domestica HOM05D002586 ORTHO05D007009 7.4e-63 245.0 306 51.0
Dinv08360 Davidia involucrata HOM05D002586 ORTHO05D007009 6.2e-62 241.9 310 49.7
PSO832G1285 Papaver somniferum HOM05D002586 ORTHO05D007009 1.4e-61 240.7 270 52.2
Manes.15G081500 Manihot esculenta HOM05D002586 ORTHO05D007009 6.9e-61 238.4 325 46.8
THA.LOC104799902 Tarenaya hassleriana HOM05D002586 ORTHO05D007009 1.5e-60 237.3 293 49.8
ClCG11G018590 Citrullus lanatus HOM05D002586 ORTHO05D007009 2.6e-60 236.5 324 46.3
DCAR_009991 Daucus carota HOM05D002586 ORTHO05D007009 1.3e-59 234.2 298 51.0
CSS0041753 Camellia sinensis var. sinensis HOM05D002586 ORTHO05D007009 7.1e-58 228.4 298 47.0
MSTRG.6857 Avicennia marina HOM05D002586 ORTHO05D007009 9.3e-58 228.0 261 52.9
vmacro09574 Vaccinium macrocarpon HOM05D002586 ORTHO05D007009 9.3e-58 228.0 290 52.1
Migut.M01848 Erythranthe guttata HOM05D002586 ORTHO05D007009 1.2e-57 227.6 293 49.1
AT4G27340 Arabidopsis thaliana HOM05D002586 ORTHO05D007009 1.6e-57 227.3 301 46.5
CSS0047341 Camellia sinensis var. sinensis HOM05D002586 ORTHO05D007009 1.6e-57 227.3 298 46.6
FvH4_3g21210 Fragaria vesca HOM05D002586 ORTHO05D007009 1.6e-57 227.3 296 50.7
FAN11G1488 Fragaria x ananassa HOM05D002586 ORTHO05D007009 2.1e-57 226.9 296 50.7
Aqoxy1G03945 Aquilegia oxysepala HOM05D002586 ORTHO05D007009 2.7e-57 226.5 295 47.1
FAN21G1241 Fragaria x ananassa HOM05D002586 ORTHO05D007009 2.7e-57 226.5 295 50.5
Thhalv10024701m.g Eutrema salsugineum HOM05D002586 ORTHO05D007009 6.0e-57 225.3 279 48.0
Sed0008369 Sechium edule HOM05D002586 ORTHO05D007009 7.9e-57 224.9 320 47.2
CAN.G1181.9 Capsicum annuum HOM05D002586 ORTHO05D007009 1.0e-56 224.6 282 49.6
Solyc12g005280.3 Solanum lycopersicum HOM05D002586 ORTHO05D007009 1.0e-56 224.6 259 52.9
TAR627G0077 Trochodendron aralioides HOM05D002586 ORTHO05D007009 1.3e-56 224.2 277 48.7
CARHR234990 Cardamine hirsuta HOM05D002586 ORTHO05D007009 1.8e-56 223.8 302 46.4
MELO3C018180.2 Cucumis melo HOM05D002586 ORTHO05D007009 1.8e-56 223.8 323 47.4
PGSC0003DMG400021815 Solanum tuberosum HOM05D002586 ORTHO05D007009 1.8e-56 223.8 241 54.4
Sabra11G0111800 Salix brachista HOM05D002586 ORTHO05D007009 2.3e-56 223.4 324 46.9
FAN16G1115 Fragaria x ananassa HOM05D002586 ORTHO05D007009 3.0e-56 223.0 296 50.0
MBI02_g25136_MAGBIO Magnolia biondii HOM05D002586 ORTHO05D007009 3.0e-56 223.0 277 49.1
Sopen12g001260 Solanum pennellii HOM05D002586 ORTHO05D007009 3.0e-56 223.0 259 52.5
RhsimUnG0172700 Rhododendron simsii HOM05D002586 ORTHO05D007009 3.9e-56 222.6 285 51.6
BcaNung03038 Brassica carinata HOM05D002586 ORTHO05D007009 5.1e-56 222.2 302 47.4
Nitab4.5_0001386g0040 Nicotiana tabacum HOM05D002586 ORTHO05D007009 8.7e-56 221.5 303 48.8
Hma1.2p1_0024F.1_g015940 Hydrangea macrophylla HOM05D002586 ORTHO05D007009 1.1e-55 221.1 215 58.1
Peaxi162Scf00000g00783 Petunia axillaris HOM05D002586 ORTHO05D007009 1.1e-55 221.1 277 52.3
CsaV3_3G044270 Cucumis sativus L. HOM05D002586 ORTHO05D007009 1.5e-55 220.7 316 47.8
PGR031G2032 Punica granatum HOM05D002586 ORTHO05D007009 1.5e-55 220.7 304 47.0
Nn1g06830 Nelumbo nucifera HOM05D002586 ORTHO05D007009 1.9e-55 220.3 314 45.5
C01p23470 Brassica napus HOM05D002586 ORTHO05D007009 1.3e-54 217.6 318 45.9
Aqoxy1G02599 Aquilegia oxysepala HOM05D002586 ORTHO05D007009 1.6e-54 217.2 277 47.7
SGA_v2.0_scaffold73G24325 Striga asiatica HOM05D002586 ORTHO05D007009 1.6e-54 217.2 272 50.0
AUR62029292 Chenopodium quinoa HOM05D002586 ORTHO05D007009 2.1e-54 216.9 309 49.5
BcaC09g50582 Brassica carinata HOM05D002586 ORTHO05D007009 2.8e-54 216.5 317 46.1
BcaNung05199 Brassica carinata HOM05D002586 ORTHO05D007009 2.8e-54 216.5 317 46.1
BolC1t02293H Brassica oleracea HOM05D002586 ORTHO05D007009 2.8e-54 216.5 317 46.1
Aa31LG5G10160 Aethionema arabicum HOM05D002586 ORTHO05D007009 3.7e-54 216.1 312 45.8
AL7G25470 Arabidopsis lyrata HOM05D002586 ORTHO05D007009 4.8e-54 215.7 300 45.3
BraA01t01801Z Brassica rapa HOM05D002586 ORTHO05D007009 4.8e-54 215.7 317 46.1
A01p18520 Brassica napus HOM05D002586 ORTHO05D007009 1.1e-53 214.5 317 46.1
Carub.0007s1354 Capsella rubella HOM05D002586 ORTHO05D007009 1.1e-53 214.5 286 45.8
Hma1.2p1_0024F.1_g015930 Hydrangea macrophylla HOM05D002586 ORTHO05D007009 1.1e-53 214.5 250 51.6
CANSAT11G0569 Cannabis sativa HOM05D002586 ORTHO05D007009 1.4e-53 214.2 305 47.5
TWI39G0497 Tripterygium wilfordii HOM05D002586 ORTHO05D007009 2.4e-53 213.4 305 49.8
Oeu006771.1 Olea europaea HOM05D002586 ORTHO05D007009 4.0e-53 212.6 246 51.6
Actinidia35288 Actinidia chinensis HOM05D002586 ORTHO05D007009 5.3e-53 212.2 296 49.3
Thecc.07G068800 Theobroma cacao HOM05D002586 ORTHO05D007009 9.0e-53 211.5 289 48.1
Cc05_g12810 Coffea canephora HOM05D002586 ORTHO05D007009 1.2e-52 211.1 301 48.5
Potri.011G125700 Populus trichocarpa HOM05D002586 ORTHO05D007009 1.2e-52 211.1 307 47.9
Cfa020488 Carpinus fangiana HOM05D002586 ORTHO05D007009 2.6e-52 209.9 299 46.2
Cpa.g.sc12.18 Carica papaya HOM05D002586 ORTHO05D007009 3.4e-52 209.5 299 48.2
unitig_85.g27402 Utricularia gibba HOM05D002586 ORTHO05D007009 5.8e-52 208.8 288 46.9
EL10Ac4g08040 Beta vulgaris HOM05D002586 ORTHO05D007009 1.0e-51 208.0 305 46.9
Nitab4.5_0000092g0280 Nicotiana tabacum HOM05D002586 ORTHO05D007009 1.3e-51 207.6 235 54.9
Sc07g0002680 Simmondsia chinensis HOM05D002586 ORTHO05D007009 1.7e-51 207.2 293 48.8
Gohir.A01G069800 Gossypium hirsutum HOM05D002586 ORTHO05D007009 6.5e-51 205.3 293 46.1
ECA236G1774 Erigeron canadensis HOM05D002586 ORTHO05D007009 2.5e-50 203.4 249 48.6
COL.COLO4_09499 Corchorus olitorius HOM05D002586 ORTHO05D007009 4.2e-50 202.6 300 45.3
Duzib268G0598 Durio zibethinus HOM05D002586 ORTHO05D007009 1.2e-49 201.1 269 46.8
arahy.Tifrunner.gnm1.ann1.KKF5XK Arachis hypogaea HOM05D002586 ORTHO05D007009 2.7e-49 199.9 243 56.0
HanXRQChr11g0331971 Helianthus annuus HOM05D002586 ORTHO05D007009 3.5e-49 199.5 284 47.9
Eucgr.F03364 Eucalyptus grandis HOM05D002586 ORTHO05D007009 4.6e-49 199.1 302 45.7
Gorai.002G077400 Gossypium raimondii HOM05D002586 ORTHO05D007009 1.0e-48 198.0 295 46.1
Atru.chr2.2940 Acer truncatum HOM05D002586 ORTHO05D007009 6.7e-48 195.3 283 48.4
CDE02G1138 Ceratophyllum demersum HOM05D002586 ORTHO05D007009 1.5e-47 194.1 268 43.7
ATR1132G118 Amborella trichopoda HOM05D002586 ORTHO05D007009 5.7e-47 192.2 276 44.9
Lsat_1_v5_gn_7_105861 Lactuca sativa HOM05D002586 ORTHO05D007009 2.4e-45 186.8 296 44.6
HPP92_010114 Vanilla planifolia HOM05D002586 ORTHO05D007009 6.9e-45 185.3 246 46.3
Lj8C162T8 Lonicera japonica HOM05D002586 ORTHO05D007009 1.9e-42 177.2 281 45.2
AUR62041166 Chenopodium quinoa HOM05D002586 ORTHO05D007009 2.5e-42 176.8 308 41.6
Ciclev10007807m.g Citrus clementina HOM05D002586 ORTHO05D007009 4.2e-42 176.0 299 44.5
BcaC09g50583 Brassica carinata HOM05D002586 ORTHO05D007009 1.1e-39 167.9 318 39.3
RhsimUnG0257200 Rhododendron simsii HOM05D002586 ORTHO05D007009 7.4e-39 165.2 285 41.4
Eucgr.L01527 Eucalyptus grandis HOM05D002586 ORTHO05D007009 6.3e-38 162.2 300 39.3
Sp7g25270 Schrenkiella parvula HOM05D002586 ORTHO05D007009 6.3e-38 162.2 214 43.9
SEGI_33629 Sequoiadendron giganteum HOM05D002586 ORTHO05D007009 4.5e-36 156.0 237 41.4
Hma1.2p1_2024F.1_g311430 Hydrangea macrophylla HOM05D002586 ORTHO05D007009 3.2e-34 149.8 198 48.5
Os01g0390400 Oryza sativa ssp. japonica HOM05D002586 ORTHO05D007009 9.7e-31 138.3 237 42.2
VMungo1383G2567 Vigna mungo HOM05D002586 ORTHO05D007009 2.2e-30 137.1 147 53.1
Migut.L00848 Erythranthe guttata HOM05D002586 ORTHO05D007009 4.2e-26 122.9 131 57.3
VMungo0540G1934 Vigna mungo HOM05D002586 ORTHO05D007009 2.1e-25 120.6 126 54.8
Gohir.D01G057000 Gossypium hirsutum HOM05D002586 ORTHO05D007009 1.0e-19 101.7 131 54.2
AagrBONN_evm.TU.Sc2ySwM_362.1470 Anthoceros agrestis HOM05D002586 ORTHO05D007009 1.2e-17 94.7 222 33.8
Oeu019380.3 Olea europaea HOM05D002586 ORTHO05D007009 1.4e-16 91.3 210 35.7
MBI02_g38751_MAGBIO Magnolia biondii HOM05D002586 ORTHO05D007009 3.7e-14 83.2 133 42.1
Pp3c16_12900 Physcomitrium patens HOM05D002586 ORTHO05D007009 1.4e-13 81.3 210 31.0
GSVIVG01014467001 Vitis vinifera HOM05D002586 ORTHO05D007009 1.9e-10 70.9 55 69.1
Mapoly0023s0079 Marchantia polymorpha HOM05D002586 ORTHO05D007009 7.2e-10 68.9 57 54.4
AagrBONN_evm.TU.Sc2ySwM_228.4718 Anthoceros agrestis HOM05D002586 ORTHO05D007009 2.3e-08 63.9 79 41.8
AagrBONN_evm.TU.Sc2ySwM_117.3145 Anthoceros agrestis HOM05D002586 ORTHO05D007009 1.7e-06 57.8 43 55.8


User provided reference genes

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