Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 1.1e-254 882.9 461 100.0
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 4.4e-232 807.7 461 91.8
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 2.2e-231 805.4 461 91.5
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 2.0e-224 782.3 441 92.3
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 2.7e-221 771.9 464 88.1
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 6.0e-221 770.8 461 87.2
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 2.5e-219 765.4 462 87.0
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 5.6e-219 764.2 461 86.8
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 3.7e-218 761.5 461 86.6
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 7.6e-216 753.8 461 85.9
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 6.5e-215 750.7 465 86.5
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 9.3e-214 746.9 465 86.0
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 1.3e-210 736.5 461 81.6
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 4.8e-210 734.6 461 82.9
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 1.3e-207 726.5 461 83.1
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 5.0e-207 724.5 462 82.7
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 1.2e-205 719.9 468 81.6
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 2.1e-205 719.2 462 79.4
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 2.7e-205 718.8 461 81.1
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 3.5e-205 718.4 462 79.4
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 5.1e-204 714.5 461 81.8
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 8.7e-204 713.8 461 79.4
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 8.7e-204 713.8 463 79.9
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 1.8e-201 706.1 461 78.3
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 6.9e-201 704.1 461 78.5
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 1.2e-200 703.4 469 80.6
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 1.2e-200 703.4 461 78.3
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 8.5e-199 697.2 461 77.0
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 2.5e-198 695.7 461 77.9
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 7.2e-198 694.1 461 77.7
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 7.2e-198 694.1 462 80.3
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 9.4e-198 693.7 461 77.2
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 2.1e-197 692.6 464 77.2
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 4.6e-197 691.4 460 80.0
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 6.1e-197 691.0 470 79.1
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 6.1e-197 691.0 461 76.4
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 1.0e-196 690.3 462 78.8
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 3.9e-196 688.3 461 76.8
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 8.8e-196 687.2 466 76.8
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 8.8e-196 687.2 461 76.8
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 1.1e-195 686.8 489 76.3
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 3.3e-195 685.3 461 76.8
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 5.7e-195 684.5 466 77.5
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 5.7e-195 684.5 466 76.6
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 9.7e-195 683.7 462 76.8
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 6.3e-194 681.0 462 76.8
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 8.2e-194 680.6 462 76.0
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 8.2e-194 680.6 461 76.6
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 4.1e-193 678.3 459 76.3
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 4.1e-193 678.3 462 76.6
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 1.2e-192 676.8 463 76.0
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 4.5e-192 674.9 464 76.1
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 4.5e-192 674.9 462 75.3
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 1.0e-191 673.7 469 76.3
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 1.3e-191 673.3 456 77.2
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 2.2e-191 672.5 468 73.5
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 3.8e-191 671.8 462 74.9
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 6.5e-191 671.0 427 80.1
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 6.5e-191 671.0 427 80.1
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 8.5e-191 670.6 481 72.1
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 2.5e-190 669.1 464 75.4
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 7.2e-190 667.5 447 79.0
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 1.2e-189 666.8 461 75.3
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 6.1e-189 664.5 464 73.9
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 6.1e-189 664.5 468 73.7
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 1.8e-188 662.9 464 74.1
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 2.3e-188 662.5 468 73.3
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 5.1e-188 661.4 467 73.7
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 1.1e-187 660.2 467 74.3
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.5e-187 659.8 463 74.5
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 1.5e-187 659.8 469 72.7
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 2.0e-187 659.4 467 73.9
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 3.3e-187 658.7 464 74.4
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 4.4e-187 658.3 463 74.3
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 1.3e-186 656.8 464 74.6
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 1.3e-186 656.8 464 74.6
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 1.3e-186 656.8 464 74.6
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 2.8e-186 655.6 462 75.5
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 1.4e-185 653.3 469 75.1
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 4.1e-185 651.7 495 71.1
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 7.0e-185 651.0 466 75.3
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 7.0e-185 651.0 469 74.8
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 1.2e-184 650.2 509 68.4
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.2e-184 650.2 469 74.6
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 2.0e-184 649.4 465 73.8
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 2.6e-184 649.0 464 73.3
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 2.6e-184 649.0 468 74.4
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 5.9e-184 647.9 464 72.6
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 1.0e-183 647.1 464 72.6
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 2.2e-183 646.0 465 73.5
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 3.8e-183 645.2 465 73.5
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 6.5e-183 644.4 466 75.1
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 6.5e-183 644.4 462 73.2
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 1.9e-182 642.9 464 72.4
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 4.2e-182 641.7 489 70.3
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 2.7e-181 639.0 405 78.3
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 5.7e-179 631.3 421 75.3
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 1.4e-177 626.7 465 69.9
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 3.1e-177 625.5 461 71.1
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 1.6e-176 623.2 422 75.1
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 2.7e-176 622.5 470 69.1
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 6.1e-173 611.3 457 69.8
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 6.1e-173 611.3 399 76.7
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 1.7e-170 603.2 465 68.4
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 2.2e-170 602.8 456 69.7
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 8.5e-167 590.9 465 68.2
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 1.8e-161 573.2 450 66.0
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 2.0e-160 569.7 399 73.9
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 2.7e-160 569.3 415 72.0
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 4.5e-160 568.5 417 67.1
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.1e-145 520.8 382 73.0
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 8.1e-141 504.6 316 80.7
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 1.4e-137 493.8 399 60.7
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 1.2e-131 474.2 411 58.4
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 2.7e-128 463.0 402 56.2
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.2e-115 421.0 467 51.2
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 1.6e-101 374.0 274 66.8
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 9.0e-100 368.2 416 50.5
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 2.9e-98 363.2 535 39.6
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 3.0e-95 353.2 258 74.8
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 3.9e-79 299.7 188 78.7
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 5.2e-71 272.7 267 59.6
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 4.1e-60 236.5 255 56.9
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 5.3e-60 236.1 255 56.9
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 4.2e-57 226.5 207 63.8
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 5.4e-52 209.5 145 77.2
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 1.4e-44 184.9 148 67.6
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 1.2e-43 181.8 163 62.6
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.0e-42 178.7 119 79.0
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 2.2e-37 161.0 125 68.8
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 6.8e-31 139.4 394 29.4
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 8.1e-24 115.9 60 93.3
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 4.9e-21 106.7 59 86.4
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 6.6e-18 96.3 57 84.2
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 1.1e-15 89.0 69 71.0
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 4.3e-09 67.0 65 61.5


User provided reference genes

Program Settings