Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_01497_v3 Cicer arietinum L. HOM05D003674 ORTHO05D004226 1.1e-190 669.8 349 100.0
TPR.G6424 Trifolium pratense HOM05D003674 ORTHO05D004226 1.9e-70 270.4 341 51.9
Lj3g0012901 Lotus japonicus HOM05D003674 ORTHO05D004226 2.5e-70 270.0 343 50.1
Medtr2g090380 Medicago truncatula HOM05D003674 ORTHO05D004226 3.2e-65 253.1 342 48.8
arahy.Tifrunner.gnm1.ann1.1DM7TY Arachis hypogaea HOM05D003674 ORTHO05D004226 7.9e-64 248.4 357 47.6
Glyma.13G296900 Glycine max HOM05D003674 ORTHO05D004226 1.3e-63 247.7 341 46.6
Glyma.12G204400 Glycine max HOM05D003674 ORTHO05D004226 1.9e-62 243.8 341 46.3
VMungo0464G1662 Vigna mungo HOM05D003674 ORTHO05D004226 4.3e-62 242.7 347 44.7
Phvul.004G108300 Phaseolus vulgaris HOM05D003674 ORTHO05D004226 7.4e-62 241.9 341 45.7
Psat5g272320 Pisum sativum HOM05D003674 ORTHO05D004226 9.0e-60 235.0 298 49.7
Lalb_Chr22g0356561 Lupinus albus HOM05D003674 ORTHO05D004226 4.5e-59 232.6 338 46.7
arahy.Tifrunner.gnm1.ann1.1TZ75T Arachis hypogaea HOM05D003674 ORTHO05D004226 1.4e-57 227.6 342 45.9
Prupe.3G138600 Prunus persica HOM05D003674 ORTHO05D004226 7.1e-57 225.3 338 44.4
TWI75G1008 Tripterygium wilfordii HOM05D003674 ORTHO05D004226 2.7e-56 223.4 336 45.2
SalBow1G3138 Salvia bowleyana HOM05D003674 ORTHO05D004226 6.7e-55 218.8 334 44.6
Ciclev10014388m.g Citrus clementina HOM05D003674 ORTHO05D004226 1.5e-54 217.6 329 44.7
THA.LOC104826033 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 1.9e-54 217.2 333 42.9
CSS0035927 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 2.5e-54 216.9 332 43.7
AL6G49310 Arabidopsis lyrata HOM05D003674 ORTHO05D004226 3.3e-54 216.5 333 44.1
THA.LOC104801172 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 3.3e-54 216.5 336 43.2
Hma1.2p1_2586F.1_g324940 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 4.3e-54 216.1 339 44.2
MD17G1240200 Malus domestica HOM05D003674 ORTHO05D004226 7.4e-54 215.3 337 43.6
RcHm_v2.0_Chr2g0126531 Rosa chinensis HOM05D003674 ORTHO05D004226 7.4e-54 215.3 340 43.8
Actinidia11032 Actinidia chinensis HOM05D003674 ORTHO05D004226 2.8e-53 213.4 337 42.1
Actinidia11076 Actinidia chinensis HOM05D003674 ORTHO05D004226 3.7e-53 213.0 337 42.7
FAN02G2237 Fragaria x ananassa HOM05D003674 ORTHO05D004226 6.3e-53 212.2 340 42.9
ECA234G3736 Erigeron canadensis HOM05D003674 ORTHO05D004226 8.2e-53 211.8 333 43.2
RcHm_v2.0_Chr2g0126551 Rosa chinensis HOM05D003674 ORTHO05D004226 8.2e-53 211.8 340 43.5
TAR624G0345 Trochodendron aralioides HOM05D003674 ORTHO05D004226 4.1e-52 209.5 337 44.2
GSVIVG01020549001 Vitis vinifera HOM05D003674 ORTHO05D004226 4.1e-52 209.5 335 41.8
COL.COLO4_30194 Corchorus olitorius HOM05D003674 ORTHO05D004226 5.3e-52 209.1 335 44.8
MSTRG.14342 Avicennia marina HOM05D003674 ORTHO05D004226 9.0e-52 208.4 334 42.5
Aqoxy4G00814 Aquilegia oxysepala HOM05D003674 ORTHO05D004226 1.5e-51 207.6 339 44.5
FvH4_6g26210 Fragaria vesca HOM05D003674 ORTHO05D004226 3.4e-51 206.5 340 42.1
SalBow1G0286 Salvia bowleyana HOM05D003674 ORTHO05D004226 3.4e-51 206.5 328 43.3
Sed0011332 Sechium edule HOM05D003674 ORTHO05D004226 3.4e-51 206.5 331 42.0
Sp6g03570 Schrenkiella parvula HOM05D003674 ORTHO05D004226 4.5e-51 206.1 333 42.9
MD09G1247300 Malus domestica HOM05D003674 ORTHO05D004226 7.6e-51 205.3 336 42.0
Solyc07g053970.3 Solanum lycopersicum HOM05D003674 ORTHO05D004226 7.6e-51 205.3 330 41.8
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 7.6e-51 205.3 330 41.8
CAN.G248.4 Capsicum annuum HOM05D003674 ORTHO05D004226 1.0e-50 204.9 335 42.4
Cc05_g07170 Coffea canephora HOM05D003674 ORTHO05D004226 1.3e-50 204.5 337 41.5
CiPaw.03G177300 Carya illinoinensis HOM05D003674 ORTHO05D004226 2.2e-50 203.8 334 42.5
vmacro12305 Vaccinium macrocarpon HOM05D003674 ORTHO05D004226 3.8e-50 203.0 336 42.6
unitig_749.g13960 Utricularia gibba HOM05D003674 ORTHO05D004226 1.1e-49 201.4 334 41.9
Thhalv10029480m.g Eutrema salsugineum HOM05D003674 ORTHO05D004226 4.2e-49 199.5 333 42.0
Sc12g0003090 Simmondsia chinensis HOM05D003674 ORTHO05D004226 4.2e-49 199.5 334 41.9
DCAR_021245 Daucus carota HOM05D003674 ORTHO05D004226 7.2e-49 198.7 326 41.7
Lsat_1_v5_gn_4_66721 Lactuca sativa HOM05D003674 ORTHO05D004226 1.2e-48 198.0 162 63.6
HanXRQChr10g0297111 Helianthus annuus HOM05D003674 ORTHO05D004226 4.6e-48 196.1 145 69.0
TAR624G0173 Trochodendron aralioides HOM05D003674 ORTHO05D004226 6.1e-48 195.7 167 63.5
BcaC04g23961 Brassica carinata HOM05D003674 ORTHO05D004226 1.0e-47 194.9 333 41.4
BolC9t53217H Brassica oleracea HOM05D003674 ORTHO05D004226 1.0e-47 194.9 333 41.4
BraA09t35927Z Brassica rapa HOM05D003674 ORTHO05D004226 1.0e-47 194.9 333 41.4
Aa31LG5G2940 Aethionema arabicum HOM05D003674 ORTHO05D004226 2.3e-47 193.7 332 41.6
Dinv23635 Davidia involucrata HOM05D003674 ORTHO05D004226 2.3e-47 193.7 146 69.9
Carub.0006s3351 Capsella rubella HOM05D003674 ORTHO05D004226 3.0e-47 193.4 333 40.8
Nitab4.5_0000512g0020 Nicotiana tabacum HOM05D003674 ORTHO05D004226 3.0e-47 193.4 188 57.4
A09p02830 Brassica napus HOM05D000230 ORTHO05D000176 3.9e-47 193.0 331 41.4
CARHR251990 Cardamine hirsuta HOM05D003674 ORTHO05D004226 6.7e-47 192.2 333 41.1
AT4G03560 Arabidopsis thaliana HOM05D003674 ORTHO05D004226 8.7e-47 191.8 333 40.8
BcaB01g02542 Brassica carinata HOM05D003674 ORTHO05D004226 1.1e-46 191.4 333 41.4
DCAR_019181 Daucus carota HOM05D003674 ORTHO05D004226 1.1e-46 191.4 334 40.1
PSO210G7128 Papaver somniferum HOM05D003674 ORTHO05D004226 1.9e-46 190.7 332 40.7
BcaC01g06668 Brassica carinata HOM05D003674 ORTHO05D004226 2.5e-46 190.3 331 41.1
A03p30360 Brassica napus HOM05D003674 ORTHO05D004226 2.5e-46 190.3 331 41.1
C03p36660 Brassica napus HOM05D003674 ORTHO05D004226 2.5e-46 190.3 331 41.1
BolC3t15980H Brassica oleracea HOM05D003674 ORTHO05D004226 2.5e-46 190.3 331 41.1
BraA03t12218Z Brassica rapa HOM05D003674 ORTHO05D004226 2.5e-46 190.3 331 41.1
Peaxi162Scf00132g00119 Petunia axillaris HOM05D003674 ORTHO05D004226 2.5e-46 190.3 146 65.8
Oeu017490.2 Olea europaea HOM05D003674 ORTHO05D004226 4.3e-46 189.5 165 61.8
PSO832G0572 Papaver somniferum HOM05D003674 ORTHO05D004226 4.3e-46 189.5 332 40.7
Hund01095 Selenicereus undatus HOM05D003674 ORTHO05D004226 4.3e-46 189.5 165 62.4
HanXRQChr06g0179591 Helianthus annuus HOM05D003674 ORTHO05D004226 4.8e-45 186.0 335 40.6
Nn1g06549 Nelumbo nucifera HOM05D003674 ORTHO05D004226 6.3e-45 185.7 311 43.1
Duzib132G0159 Durio zibethinus HOM05D003674 ORTHO05D004226 5.3e-44 182.6 337 40.1
EL10Ac9g20767 Beta vulgaris HOM05D003674 ORTHO05D004226 1.5e-43 181.0 165 58.8
AUR62037356 Chenopodium quinoa HOM05D003674 ORTHO05D004226 1.5e-43 181.0 151 61.6
AUR62042592 Chenopodium quinoa HOM05D003674 ORTHO05D004226 1.5e-43 181.0 151 61.6
Zm00001eb360320 Zea mays HOM05D003674 ORTHO05D004226 1.5e-43 181.0 332 38.9
Potri.013G131100 Populus trichocarpa HOM05D003674 ORTHO05D004226 5.9e-43 179.1 340 38.8
Os01g0678500 Oryza sativa ssp. japonica HOM05D003674 ORTHO05D004226 1.3e-42 177.9 329 38.3
Thecc.02G180000 Theobroma cacao HOM05D003674 ORTHO05D004226 1.3e-42 177.9 337 38.6
DCAR_013011 Daucus carota HOM05D003674 ORTHO05D004226 5.0e-42 176.0 343 37.6
MSTRG.14332 Avicennia marina HOM05D003674 ORTHO05D004226 6.5e-42 175.6 331 39.0
Cfa014617 Carpinus fangiana HOM05D003674 ORTHO05D004226 6.5e-42 175.6 333 40.2
Manes.13G146400 Manihot esculenta HOM05D003674 ORTHO05D004226 1.9e-41 174.1 334 39.5
BcaB01g01906 Brassica carinata HOM05D003674 ORTHO05D004226 2.5e-41 173.7 333 39.6
MELO3C018734.2 Cucumis melo HOM05D003674 ORTHO05D004226 5.5e-41 172.6 331 37.5
CiPaw.04G126200 Carya illinoinensis HOM05D003674 ORTHO05D004226 1.2e-40 171.4 303 41.6
CsaV3_7G004450 Cucumis sativus L. HOM05D003674 ORTHO05D004226 6.1e-40 169.1 329 37.1
Cpa.g.sc848.1 Carica papaya HOM05D003674 ORTHO05D004226 1.8e-39 167.5 103 79.6
DCAR_013010 Daucus carota HOM05D003674 ORTHO05D004226 1.8e-39 167.5 359 35.9
QL08p038784 Quercus lobata HOM05D003674 ORTHO05D004226 1.8e-39 167.5 335 38.5
Gohir.A03G156500 Gossypium hirsutum HOM05D003674 ORTHO05D004226 2.3e-39 167.2 335 38.2
Gohir.D02G179566 Gossypium hirsutum HOM05D003674 ORTHO05D004226 2.3e-39 167.2 335 38.2
Gorai.005G201400 Gossypium raimondii HOM05D003674 ORTHO05D004226 2.3e-39 167.2 335 38.2
QL08p038841 Quercus lobata HOM05D003674 ORTHO05D004226 5.1e-39 166.0 335 38.2
CAN.G1472.4 Capsicum annuum HOM05D003674 ORTHO05D004226 2.0e-38 164.1 165 52.1
Nitab4.5_0004344g0030 Nicotiana tabacum HOM05D003674 ORTHO05D004226 5.7e-38 162.5 107 75.7
FAN09G3196 Fragaria x ananassa HOM05D000230 ORTHO05D004226 3.7e-37 159.8 338 36.7
Haze_13165 Corylus avellana HOM05D003674 ORTHO05D004226 4.8e-37 159.5 341 38.1
Lsat_1_v5_gn_4_64281 Lactuca sativa HOM05D003674 ORTHO05D004226 8.2e-37 158.7 118 69.5
Rhsim06G0142000 Rhododendron simsii HOM05D003674 ORTHO05D004226 8.2e-37 158.7 107 73.8
Sabra13G0110700 Salix brachista HOM05D003674 ORTHO05D004226 1.4e-36 157.9 340 35.6
Nitab4.5_0000638g0280 Nicotiana tabacum HOM05D003674 ORTHO05D004226 3.4e-35 153.3 148 58.1
HPP92_008135 Vanilla planifolia HOM05D003674 ORTHO05D004226 4.5e-35 152.9 339 36.0
PSO675G3793 Papaver somniferum HOM05D003674 ORTHO05D004226 3.8e-34 149.8 147 51.7
ATR0737G184 Amborella trichopoda HOM05D003674 ORTHO05D004226 5.0e-34 149.4 305 36.4
SGA_v2.0_scaffold322G48614 Striga asiatica HOM05D003674 ORTHO05D004226 4.2e-33 146.4 338 35.5
Pp3c1_6270 Physcomitrium patens HOM05D003674 ORTHO05D004226 5.5e-33 146.0 340 34.7
Pp3c1_6272 Physcomitrium patens HOM05D003674 ORTHO05D004226 5.5e-33 146.0 340 34.7
SHI10399 Sapria himalayana HOM05D003674 ORTHO05D004226 5.5e-33 146.0 185 49.2
Mapoly0002s0274 Marchantia polymorpha HOM05D003674 ORTHO05D004226 2.1e-32 144.1 341 34.0
Oeu017491.1 Olea europaea HOM05D003674 ORTHO05D004226 2.7e-32 143.7 339 35.7
MBI06_g04180_MAGBIO Magnolia biondii HOM05D003674 ORTHO05D004226 3.9e-31 139.8 101 73.3
AagrBONN_evm.TU.Sc2ySwM_344.5080 Anthoceros agrestis HOM05D003674 ORTHO05D004226 1.1e-30 138.3 160 47.5
Pp3c15_12230 Physcomitrium patens HOM05D003674 ORTHO05D004226 2.0e-30 137.5 178 42.7
Oeu058850.1 Olea europaea HOM05D003674 ORTHO05D004226 2.6e-30 137.1 162 49.4
QL08p038913 Quercus lobata HOM05D003674 ORTHO05D004226 1.1e-28 131.7 340 34.1
CSS0020583 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 2.0e-27 127.5 333 32.7
CSS0005418 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 3.5e-27 126.7 333 32.7
FAN05G0320 Fragaria x ananassa HOM05D000230 ORTHO05D000176 5.9e-27 125.9 88 69.3
ClCG07G002890 Citrullus lanatus HOM05D003674 ORTHO05D004226 1.7e-26 124.4 331 32.9
PGR142G3148 Punica granatum HOM05D003674 ORTHO05D004226 5.0e-26 122.9 338 32.8
Ah.01g004260 Amaranthus hybridus HOM05D003674 ORTHO05D004226 1.5e-25 121.3 108 61.1
Peaxi162Scf00132g00117 Petunia axillaris HOM05D003674 ORTHO05D004226 1.5e-25 121.3 153 47.7
Eucgr.K01029 Eucalyptus grandis HOM05D003674 ORTHO05D004226 1.9e-25 120.9 329 33.1
Migut.H01178 Erythranthe guttata HOM05D003674 ORTHO05D004226 4.2e-25 119.8 329 33.4
Eucgr.K01031 Eucalyptus grandis HOM05D003674 ORTHO05D004226 2.1e-24 117.5 329 32.8
Eucgr.K01030 Eucalyptus grandis HOM05D003674 ORTHO05D004226 1.2e-22 111.7 328 31.7
SEGI_23599 Sequoiadendron giganteum HOM05D003674 ORTHO05D004226 2.8e-21 107.1 97 55.7
Sabra13G0110800 Salix brachista HOM05D003674 ORTHO05D004226 1.5e-17 94.7 63 73.0
Mapoly0050s0061 Marchantia polymorpha HOM05D003674 ORTHO05D004226 9.8e-14 82.0 124 37.1
CBR_g41145 Chara braunii HOM05D003674 ORTHO05D004226 1.4e-12 78.2 161 31.1
Pp3c18_10190 Physcomitrium patens HOM05D003674 ORTHO05D004226 4.1e-12 76.6 128 33.6
CDE08G1051 Ceratophyllum demersum HOM05D003674 ORTHO05D004226 5.9e-11 72.8 248 29.4
Pp3c1_28370 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.3e-10 71.6 146 35.6
Pp3c14_20770 Physcomitrium patens HOM05D003674 ORTHO05D004226 6.5e-10 69.3 139 33.1
Pp3c21_11410 Physcomitrium patens HOM05D003674 ORTHO05D004226 6.5e-10 69.3 128 32.8
Pp3c19_18680 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.1e-09 68.6 124 31.5
Nitab4.5_0012835g0030 Nicotiana tabacum HOM05D003674 ORTHO05D004226 3.3e-09 67.0 98 44.9
Pp3c2_10230 Physcomitrium patens HOM05D003674 ORTHO05D004226 4.2e-09 66.6 139 34.5
Oeu030714.1 Olea europaea HOM05D003674 ORTHO05D004226 3.6e-08 63.5 76 51.3
Pp3c3_16950 Physcomitrium patens HOM05D003674 ORTHO05D004226 6.1e-08 62.8 114 36.0
Mapoly0062s0036 Marchantia polymorpha HOM05D003674 ORTHO05D004226 8.0e-08 62.4 141 30.5


User provided reference genes

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