Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 6.9e-309 1063.1 539 100.0
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 1.0e-219 766.9 490 81.0
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 1.1e-202 710.3 513 70.6
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 5.1e-195 684.9 588 64.6
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 2.0e-191 672.9 518 67.2
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 7.4e-186 654.4 423 77.1
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 4.2e-173 612.1 536 61.6
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 1.1e-168 597.4 517 60.9
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 1.0e-166 590.9 503 61.4
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 2.9e-166 589.3 543 59.1
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 7.2e-165 584.7 558 57.7
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 8.5e-158 561.2 409 67.0
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 7.9e-156 554.7 657 48.9
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 1.4e-155 553.9 410 66.3
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 2.6e-154 549.7 364 70.9
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 8.2e-153 544.7 393 66.9
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 1.8e-152 543.5 668 47.5
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 7.2e-141 505.0 352 67.3
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 9.4e-141 504.6 355 67.0
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 1.2e-140 504.2 364 65.7
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 7.5e-138 495.0 349 66.2
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 3.7e-137 492.7 411 61.8
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.4e-136 490.7 351 65.0
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 4.1e-136 489.2 358 64.5
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.0e-135 486.9 349 64.2
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.7e-135 486.5 349 64.5
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 5.9e-135 485.3 349 64.2
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 5.9e-135 485.3 363 63.1
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 1.3e-134 484.2 342 65.2
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 6.5e-134 481.9 316 71.8
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 6.5e-134 481.9 349 65.0
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.5e-133 479.9 349 63.3
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 2.5e-133 479.9 349 65.6
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 5.5e-133 478.8 432 54.9
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 2.1e-132 476.9 399 58.9
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 3.6e-132 476.1 351 64.1
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 4.7e-132 475.7 370 62.7
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 6.1e-132 475.3 385 59.7
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 3.0e-131 473.0 310 71.0
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 4.4e-130 469.2 384 57.3
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 5.7e-130 468.8 426 55.2
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 9.8e-130 468.0 388 59.5
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 9.8e-130 468.0 382 57.6
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 1.7e-129 467.2 371 59.3
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 3.7e-129 466.1 374 58.8
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 3.1e-128 463.0 346 63.0
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 8.6e-126 454.9 379 59.6
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 1.5e-125 454.1 370 58.4
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 4.2e-125 452.6 354 60.5
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 1.2e-124 451.1 368 58.2
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 1.2e-124 451.1 368 58.7
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 1.2e-124 451.1 310 66.8
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 1.0e-123 448.0 305 66.2
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 8.9e-123 444.9 309 64.4
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.6e-122 443.4 374 56.4
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 4.4e-122 442.6 484 49.8
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 5.7e-122 442.2 343 59.8
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 5.7e-122 442.2 393 57.3
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 1.3e-121 441.0 355 56.9
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.7e-121 440.7 355 58.0
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 2.8e-121 439.9 465 48.8
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 8.3e-121 438.3 536 45.7
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.4e-120 437.6 387 55.8
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 2.4e-120 436.8 480 48.5
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 3.5e-119 433.0 475 48.4
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 1.3e-118 431.0 492 49.6
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 1.3e-118 431.0 357 59.1
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 2.3e-118 430.3 310 62.9
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 2.9e-118 429.9 351 57.0
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 8.6e-118 428.3 362 56.1
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 2.5e-117 426.8 393 55.0
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 1.2e-116 424.5 356 55.6
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 2.8e-116 423.3 368 53.8
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 1.0e-115 421.4 365 57.3
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 3.4e-114 416.4 339 57.2
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 2.9e-113 413.3 336 56.5
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 1.4e-112 411.0 370 54.1
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 1.9e-112 410.6 362 54.1
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 5.4e-112 409.1 383 53.8
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 1.6e-111 407.5 338 54.7
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 3.3e-109 399.8 346 56.1
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 3.3e-109 399.8 359 54.3
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 9.5e-109 398.3 350 53.1
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 1.6e-108 397.5 447 46.5
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 1.6e-108 397.5 365 52.3
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 2.1e-108 397.1 342 57.0
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 2.8e-108 396.7 479 44.7
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 6.2e-108 395.6 375 49.9
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 8.0e-108 395.2 323 56.3
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 3.4e-106 389.8 491 44.8
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 3.4e-106 389.8 248 70.6
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 4.4e-106 389.4 384 50.5
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 1.3e-105 387.9 373 51.7
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 1.7e-105 387.5 362 55.5
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 2.2e-105 387.1 415 50.4
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 1.9e-104 384.0 386 50.8
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 2.4e-104 383.6 484 45.7
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 2.4e-104 383.6 469 43.9
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 4.1e-104 382.9 421 48.7
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 7.1e-104 382.1 489 42.3
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 1.6e-103 380.9 484 45.5
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 2.7e-103 380.2 436 45.9
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 3.5e-103 379.8 476 45.4
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 4.6e-103 379.4 382 51.3
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 1.0e-102 378.3 352 53.1
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 5.1e-102 375.9 518 40.9
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 9.5e-101 371.7 379 49.1
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 1.6e-100 370.9 363 49.6
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.4e-99 367.9 494 42.5
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 1.8e-99 367.5 269 62.5
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.3e-99 367.1 463 43.6
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 4.1e-96 356.3 498 42.2
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 2.7e-95 353.6 490 43.7
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 1.3e-94 351.3 373 47.7
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 1.7e-94 350.9 317 53.3
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 3.0e-94 350.1 520 39.0
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 8.6e-94 348.6 526 41.1
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 8.6e-94 348.6 375 46.4
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 1.5e-93 347.8 389 46.0
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 5.6e-93 345.9 375 46.1
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 7.3e-93 345.5 518 42.1
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 1.2e-92 344.7 405 45.7
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 3.6e-92 343.2 375 46.1
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 5.2e-91 339.3 517 41.0
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 4.4e-90 336.3 417 43.2
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 1.3e-89 334.7 523 40.5
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 1.7e-89 334.3 288 52.4
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 3.8e-89 333.2 499 40.7
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 3.8e-89 333.2 297 54.2
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 1.9e-88 330.9 520 40.4
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 5.4e-88 329.3 301 54.2
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 4.6e-87 326.2 343 46.4
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 5.1e-86 322.8 515 40.2
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 6.6e-86 322.4 497 40.6
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 8.7e-86 322.0 521 39.7
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 1.1e-85 321.6 241 59.8
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 2.1e-84 317.4 441 42.2
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 3.4e-82 310.1 330 45.5
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.4e-80 304.7 482 39.6
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.9e-73 279.6 321 43.6
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 1.1e-72 278.5 330 41.8
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 3.5e-71 273.5 301 46.8
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 2.4e-67 260.8 341 41.1
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 5.3e-67 259.6 316 41.5
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 1.2e-66 258.5 332 38.9
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.0e-65 255.4 342 39.5
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.9e-65 253.1 342 39.5
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.9e-61 241.1 315 39.0
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 2.8e-60 237.3 213 51.6
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 3.7e-60 236.9 360 35.8
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.8e-59 234.6 323 36.5
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 2.4e-59 234.2 290 41.4
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 1.4e-56 224.9 194 53.6
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 7.9e-55 219.2 215 47.4
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 2.5e-53 214.2 269 38.7
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 8.2e-52 209.1 298 37.9
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 8.2e-52 209.1 298 37.9
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 3.1e-51 207.2 191 47.6
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 5.9e-50 203.0 286 36.7
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.7e-44 184.9 137 62.0
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 6.9e-43 179.5 177 50.3
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 7.9e-39 166.0 134 54.5
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 5.1e-38 163.3 118 63.6
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 5.3e-35 153.3 115 61.7
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 5.3e-35 153.3 160 48.8
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 2.1e-31 141.4 223 38.1
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.7e-28 131.7 258 32.2
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.4e-27 128.6 164 36.0
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.3e-25 122.1 84 61.9
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 6.1e-23 113.2 88 55.7
MCO14G045 Micromonas commoda HOM05D000861 ORTHO05D004749 1.6e-18 98.6 285 26.7
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 1.3e-17 95.5 77 58.4
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 3.8e-17 94.0 103 44.7
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 2.5e-16 91.3 60 68.3
PRCOL_00002048 Prasinoderma coloniale HOM05D000861 ORTHO05D004749 3.4e-13 80.9 173 28.9
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 2.9e-09 67.8 101 37.6


User provided reference genes

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