Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0050269 Camellia sinensis var. sinensis HOM05D017261 ORTHO05D015793 3.5e-68 261.5 134 100.0
CSS0035071 Camellia sinensis var. sinensis HOM05D017261 ORTHO05D015793 2.6e-60 235.3 146 85.6
CSS0047509 Camellia sinensis var. sinensis HOM05D017261 ORTHO05D015793 3.8e-59 231.5 146 84.2
CSS0029028 Camellia sinensis var. sinensis HOM05D017261 ORTHO05D015793 2.5e-58 228.8 146 83.6
CSS0015116 Camellia sinensis var. sinensis HOM05D017261 ORTHO05D015793 1.6e-57 226.1 146 82.2
CSS0036493 Camellia sinensis var. sinensis HOM05D017261 ORTHO05D015793 1.0e-48 196.8 146 76.7
CSS0010138 Camellia sinensis var. sinensis HOM05D000570 ORTHO05D001174 2.2e-46 189.1 142 73.2
CSS0005489 Camellia sinensis var. sinensis HOM05D000570 ORTHO05D001174 5.9e-36 154.5 142 60.6
CSS0037529 Camellia sinensis var. sinensis HOM05D017261 ORTHO05D015793 2.1e-33 146.0 146 62.3
Oeu013830.1 Olea europaea HOM05D000570 ORTHO05D001174 1.0e-32 143.7 141 57.4
Hma1.2p1_0298F.1_g117490 Hydrangea macrophylla HOM05D000570 ORTHO05D001174 2.7e-28 129.0 145 57.2
Lj1A1235G87 Lonicera japonica HOM05D000570 ORTHO05D001174 5.6e-26 121.3 131 55.7
vmacro15803 Vaccinium macrocarpon HOM05D000570 ORTHO05D001174 2.8e-25 119.0 142 51.4
Solyc02g081070.4 Solanum lycopersicum HOM05D000570 ORTHO05D001174 4.7e-25 118.2 137 50.4
Sopen02g025740 Solanum pennellii HOM05D000570 ORTHO05D001174 4.7e-25 118.2 137 50.4
PGSC0003DMG400016709 Solanum tuberosum HOM05D000570 ORTHO05D001174 1.8e-24 116.3 137 50.4
TAR626G0159 Trochodendron aralioides HOM05D000570 ORTHO05D001174 2.3e-24 115.9 143 48.3
CAN.G1014.44 Capsicum annuum HOM05D000570 ORTHO05D001174 3.1e-24 115.5 137 50.4
DCAR_024985 Daucus carota HOM05D000570 ORTHO05D001174 8.9e-24 114.0 131 53.4
Rhsim02G0105000 Rhododendron simsii HOM05D000570 ORTHO05D001174 1.5e-23 113.2 125 55.2
GSVIVG01004806001 Vitis vinifera HOM05D000570 ORTHO05D001174 2.6e-23 112.5 140 52.1
Actinidia39260 Actinidia chinensis HOM05D000570 ORTHO05D001174 4.9e-22 108.2 130 51.5
Duzib235G1179 Durio zibethinus HOM05D000570 ORTHO05D001174 4.9e-22 108.2 126 50.8
ECA236G0302 Erigeron canadensis HOM05D000570 ORTHO05D001174 1.4e-21 106.7 141 45.4
Lsat_1_v5_gn_7_15161 Lactuca sativa HOM05D000570 ORTHO05D001174 1.4e-21 106.7 129 47.3
MSTRG.14627 Avicennia marina HOM05D000570 ORTHO05D001174 5.4e-21 104.8 128 48.4
Cc09_g01270 Coffea canephora HOM05D000570 ORTHO05D001174 7.1e-21 104.4 128 50.8
Lalb_Chr20g0118921 Lupinus albus HOM05D000570 ORTHO05D001174 7.1e-21 104.4 122 49.2
HanXRQChr05g0129311 Helianthus annuus HOM05D000570 ORTHO05D001174 2.1e-20 102.8 139 45.3
Cpa.g.sc152.51 Carica papaya HOM05D000570 ORTHO05D001174 3.5e-20 102.1 123 49.6
Atru.chr10.2275 Acer truncatum HOM05D000570 ORTHO05D001174 7.8e-20 100.9 137 43.8
Nitab4.5_0012576g0010 Nicotiana tabacum HOM05D000570 ORTHO05D001174 2.3e-19 99.4 135 45.9
Ciclev10014418m.g Citrus clementina HOM05D000570 ORTHO05D001174 3.0e-19 99.0 135 46.7
Thecc.06G227500 Theobroma cacao HOM05D000570 ORTHO05D001174 3.9e-19 98.6 141 46.1
Gorai.010G183400 Gossypium raimondii HOM05D000570 ORTHO05D001174 1.1e-18 97.1 118 50.0
HanXRQChr15g0470551 Helianthus annuus HOM05D000570 ORTHO05D001174 1.5e-18 96.7 141 41.1
Sabra11G0008000 Salix brachista HOM05D000570 ORTHO05D001174 1.5e-18 96.7 120 50.0
COL.COLO4_31827 Corchorus olitorius HOM05D000570 ORTHO05D001174 1.9e-18 96.3 137 45.3
TPR.G12988 Trifolium pratense HOM05D000570 ORTHO05D001174 3.3e-18 95.5 122 50.8
Gohir.A06G150700 Gossypium hirsutum HOM05D000570 ORTHO05D001174 5.6e-18 94.7 118 48.3
Gohir.D06G156900 Gossypium hirsutum HOM05D000570 ORTHO05D001174 7.3e-18 94.4 118 49.2
SGA_v2.0_scaffold89G27483 Striga asiatica HOM05D000570 ORTHO05D001174 9.5e-18 94.0 141 42.6
MD10G1326000 Malus domestica HOM05D000570 ORTHO05D001174 6.2e-17 91.3 141 43.3
Gohir.A10G011100 Gossypium hirsutum HOM05D000570 ORTHO05D001174 8.1e-17 90.9 141 43.3
QL05p072009 Quercus lobata HOM05D000570 ORTHO05D001174 1.4e-16 90.1 123 45.5
Nitab4.5_0001409g0210 Nicotiana tabacum HOM05D000570 ORTHO05D001174 1.8e-16 89.7 124 47.6
Sc05g0009430 Simmondsia chinensis HOM05D000570 ORTHO05D001174 3.1e-16 89.0 127 48.8
MD05G1351900 Malus domestica HOM05D000570 ORTHO05D001174 5.2e-16 88.2 137 41.6
Migut.H01588 Erythranthe guttata HOM05D000570 ORTHO05D001174 8.9e-16 87.4 138 42.8
CANSAT56G2530 Cannabis sativa HOM05D000570 ORTHO05D001174 1.2e-15 87.0 126 44.4
PSO832G2605 Papaver somniferum HOM05D000570 ORTHO05D001174 2.6e-15 85.9 126 41.3
Peaxi162Scf00178g00216 Petunia axillaris HOM05D000570 ORTHO05D001174 2.6e-15 85.9 118 50.0
Phvul.006G146100 Phaseolus vulgaris HOM05D000570 ORTHO05D001174 2.6e-15 85.9 121 43.8
Gorai.011G011800 Gossypium raimondii HOM05D000570 ORTHO05D001174 3.4e-15 85.5 141 42.6
PSO210G6440 Papaver somniferum HOM05D000570 ORTHO05D001174 3.4e-15 85.5 126 41.3
Hund21434 Selenicereus undatus HOM05D000570 ORTHO05D001174 4.4e-15 85.1 131 40.5
Potri.011G010500 Populus trichocarpa HOM05D000570 ORTHO05D001174 9.9e-15 84.0 110 47.3
Potri.004G005301 Populus trichocarpa HOM05D000570 ORTHO05D001174 2.2e-14 82.8 124 44.4
Glyma.15G111600 Glycine max HOM05D000570 ORTHO05D001174 2.9e-14 82.4 121 43.0
SGA_v2.0_scaffold49G18250 Striga asiatica HOM05D000570 ORTHO05D001174 2.9e-14 82.4 118 44.1
Gohir.D10G010700 Gossypium hirsutum HOM05D000570 ORTHO05D001174 4.9e-14 81.6 141 41.1
Lalb_Chr15g0087741 Lupinus albus HOM05D000570 ORTHO05D001174 6.4e-14 81.3 123 44.7
QL02p081725 Quercus lobata HOM05D017261 ORTHO05D015793 5.4e-13 78.2 74 56.8
Manes.16G003200 Manihot esculenta HOM05D000570 ORTHO05D001174 1.2e-12 77.0 101 46.5
THA.LOC104813393 Tarenaya hassleriana HOM05D000570 ORTHO05D001174 2.7e-12 75.9 135 41.5
Ah.09g234550 Amaranthus hybridus HOM05D000570 ORTHO05D001174 1.0e-11 73.9 112 41.1
CsaV3_1G046110 Cucumis sativus L. HOM05D000570 ORTHO05D001174 1.0e-11 73.9 126 38.9
Os02g0190500 Oryza sativa ssp. japonica HOM05D000570 ORTHO05D001174 1.0e-11 73.9 141 35.5
Sabra04G0002700 Salix brachista HOM05D000570 ORTHO05D001174 1.0e-11 73.9 135 38.5
THA.LOC104812980 Tarenaya hassleriana HOM05D000570 ORTHO05D001174 1.0e-11 73.9 133 39.8
CDE04G0812 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 1.7e-11 73.2 133 38.3
Lsat_1_v5_gn_0_22980 Lactuca sativa HOM05D000570 ORTHO05D001174 1.7e-11 73.2 114 43.0
PGR004G0535 Punica granatum HOM05D000570 ORTHO05D001174 1.7e-11 73.2 120 39.2
Aqoxy1G03467 Aquilegia oxysepala HOM05D000570 ORTHO05D001174 2.3e-11 72.8 121 40.5
FvH4_3g01460 Fragaria vesca HOM05D000570 ORTHO05D001174 3.0e-11 72.4 102 45.1
Lj6g0005851 Lotus japonicus HOM05D000570 ORTHO05D001174 2.5e-10 69.3 122 42.6
Medtr2g024330 Medicago truncatula HOM05D000570 ORTHO05D001174 5.6e-10 68.2 108 45.4
Haze_06852 Corylus avellana HOM05D000570 ORTHO05D001174 7.3e-10 67.8 123 39.8
FAN21G0433 Fragaria x ananassa HOM05D000570 ORTHO05D001174 7.3e-10 67.8 104 43.3
Zm00001eb234920 Zea mays HOM05D000570 ORTHO05D001174 7.3e-10 67.8 137 32.8
Zm00001eb275550 Zea mays HOM05D000570 ORTHO05D001174 7.3e-10 67.8 123 38.2
RcHm_v2.0_Chr5g0002301 Rosa chinensis HOM05D000570 ORTHO05D001174 1.2e-09 67.0 122 38.5
HPP92_010492 Vanilla planifolia HOM05D004528 ORTHO05D005815 1.2e-09 67.0 143 34.3
CARHR044040 Cardamine hirsuta HOM05D000570 ORTHO05D001174 1.6e-09 66.6 116 39.7
ATR0686G143 Amborella trichopoda HOM05D000570 ORTHO05D015793 2.1e-09 66.2 139 36.0
MBI19_g45795_MAGBIO Magnolia biondii HOM05D000570 ORTHO05D001174 3.6e-09 65.5 96 41.7
TAR624G1309 Trochodendron aralioides HOM05D000570 ORTHO05D001174 4.7e-09 65.1 108 39.8
VMungo0540G1870 Vigna mungo HOM05D000570 ORTHO05D001174 4.7e-09 65.1 121 40.5
CDE06G1424 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 6.2e-09 64.7 119 40.3
TWI38G1871 Tripterygium wilfordii HOM05D000570 ORTHO05D001174 1.1e-08 63.9 122 38.5
CiPaw.10G074100 Carya illinoinensis HOM05D000570 ORTHO05D001174 1.8e-08 63.2 123 39.8
RcHm_v2.0_Chr2g0148621 Rosa chinensis HOM05D000570 ORTHO05D001174 2.4e-08 62.8 101 39.6
Thhalv10020162m.g Eutrema salsugineum HOM05D000570 ORTHO05D001174 3.1e-08 62.4 111 43.2
Hund05695 Selenicereus undatus HOM05D000570 ORTHO05D001174 3.1e-08 62.4 126 31.7
AUR62021905 Chenopodium quinoa HOM05D000570 ORTHO05D001174 4.0e-08 62.0 125 35.2
Prupe.4G015700 Prunus persica HOM05D000570 ORTHO05D001174 1.5e-07 60.1 124 38.7
Hund23438 Selenicereus undatus HOM05D000570 ORTHO05D001174 2.6e-07 59.3 34 67.6
CDE06G2079 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 4.4e-07 58.5 101 42.6
Ca_00690_v3 Cicer arietinum L. HOM05D000570 ORTHO05D001174 5.8e-07 58.2 106 41.5
AT1G53730 Arabidopsis thaliana HOM05D000570 ORTHO05D001174 7.6e-07 57.8 108 38.0
BcaC05g29092 Brassica carinata HOM05D000570 ORTHO05D001174 9.9e-07 57.4 136 39.0
C05p53010 Brassica napus HOM05D000570 ORTHO05D001174 9.9e-07 57.4 136 39.0
BolC5t33981H Brassica oleracea HOM05D000570 ORTHO05D001174 9.9e-07 57.4 136 39.0
CDE07G0083 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 9.9e-07 57.4 100 42.0
HPP92_012346 Vanilla planifolia HOM05D000570 ORTHO05D002740 9.9e-07 57.4 118 34.7
SEGI_17819 Sequoiadendron giganteum HOM05D000570 ORTHO05D001174 1.3e-06 57.0 116 35.3
Rhsim08G0251800 Rhododendron simsii HOM05D000570 ORTHO05D001174 2.2e-06 56.2 83 41.0
Carub.0001s4301 Capsella rubella HOM05D000570 ORTHO05D001174 2.9e-06 55.8 110 36.4
AL1G62430 Arabidopsis lyrata HOM05D000570 ORTHO05D001174 3.8e-06 55.5 83 43.4
Nitab4.5_0002473g0060 Nicotiana tabacum HOM05D000570 ORTHO05D002740 3.8e-06 55.5 118 35.6
PGSC0003DMG400007862 Solanum tuberosum HOM05D000570 ORTHO05D002740 3.8e-06 55.5 124 34.7
ClCG08G004900 Citrullus lanatus HOM05D000570 ORTHO05D001174 4.9e-06 55.1 103 37.9
FAN25G3172 Fragaria x ananassa HOM05D000570 ORTHO05D001174 4.9e-06 55.1 98 37.8
Glyma.09G007200 Glycine max HOM05D000570 ORTHO05D001174 6.4e-06 54.7 110 40.0


User provided reference genes

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