Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049837 Camellia sinensis var. sinensis HOM05D004807 ORTHO05D005915 4.3e-56 221.1 112 100.0
Lj1A1135G80 Lonicera japonica HOM05D004807 ORTHO05D005915 3.4e-45 184.9 103 91.3
Rhsim03G0002400 Rhododendron simsii HOM05D004807 ORTHO05D005915 1.7e-44 182.6 104 90.4
RhsimUnG0014500 Rhododendron simsii HOM05D004807 ORTHO05D005915 1.7e-44 182.6 104 90.4
Actinidia27127 Actinidia chinensis HOM05D004807 ORTHO05D005915 1.9e-43 179.1 103 85.4
DCAR_017047 Daucus carota HOM05D004807 ORTHO05D005915 1.7e-39 166.0 103 82.5
QL07p025555 Quercus lobata HOM05D004807 ORTHO05D005915 1.8e-38 162.5 102 77.5
Solyc10g080630.2 Solanum lycopersicum HOM05D004807 ORTHO05D005915 5.3e-38 161.0 103 79.6
Sopen10g031170 Solanum pennellii HOM05D004807 ORTHO05D005915 5.3e-38 161.0 103 79.6
Nitab4.5_0001079g0110 Nicotiana tabacum HOM05D004807 ORTHO05D005915 9.1e-38 160.2 103 80.6
Potri.006G197200 Populus trichocarpa HOM05D004807 ORTHO05D005915 9.1e-38 160.2 103 75.7
Actinidia01589 Actinidia chinensis HOM05D004807 ORTHO05D005915 1.5e-37 159.5 100 80.0
Nn7g35896 Nelumbo nucifera HOM05D004807 ORTHO05D005915 1.5e-37 159.5 103 81.6
Eucgr.K01882 Eucalyptus grandis HOM05D004807 ORTHO05D005915 2.6e-37 158.7 103 74.8
Peaxi162Scf00249g00811 Petunia axillaris HOM05D004807 ORTHO05D005915 2.6e-37 158.7 103 79.6
Actinidia22072 Actinidia chinensis HOM05D004807 ORTHO05D005915 4.5e-37 157.9 89 86.5
Nitab4.5_0005684g0020 Nicotiana tabacum HOM05D004807 ORTHO05D005915 4.5e-37 157.9 103 79.6
GSVIVG01033428001 Vitis vinifera HOM05D004807 ORTHO05D005915 7.7e-37 157.1 106 80.2
PGR142G0165 Punica granatum HOM05D004807 ORTHO05D005915 1.0e-36 156.8 103 74.8
CAN.G128.57 Capsicum annuum HOM05D004807 ORTHO05D005915 1.3e-36 156.4 103 77.7
Cpa.g.sc85.18 Carica papaya HOM05D004807 ORTHO05D005915 1.7e-36 156.0 103 75.7
CiPaw.09G026200 Carya illinoinensis HOM05D004807 ORTHO05D005915 2.2e-36 155.6 103 72.8
MSTRG.19928 Avicennia marina HOM05D004807 ORTHO05D005915 6.5e-36 154.1 103 77.7
Ciclev10011630m.g Citrus clementina HOM05D004807 ORTHO05D005915 1.1e-35 153.3 105 76.2
Sabra06G0151700 Salix brachista HOM05D004807 ORTHO05D005915 1.9e-35 152.5 109 71.6
CANSAT64G1965 Cannabis sativa HOM05D004807 ORTHO05D005915 2.5e-35 152.1 103 75.7
Migut.J01878 Erythranthe guttata HOM05D004807 ORTHO05D005915 3.2e-35 151.8 104 77.9
Manes.08G040000 Manihot esculenta HOM05D004807 ORTHO05D005915 3.2e-35 151.8 103 74.8
Cfa020114 Carpinus fangiana HOM05D004807 ORTHO05D005915 4.2e-35 151.4 103 72.8
Gohir.D09G126500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 5.5e-35 151.0 103 73.8
Gorai.006G145300 Gossypium raimondii HOM05D004807 ORTHO05D005915 5.5e-35 151.0 103 73.8
Atru.chr8.1221 Acer truncatum HOM05D004807 ORTHO05D005915 7.2e-35 150.6 103 73.8
COL.COLO4_29436 Corchorus olitorius HOM05D004807 ORTHO05D005915 9.4e-35 150.2 103 72.8
Thecc.05G180400 Theobroma cacao HOM05D004807 ORTHO05D005915 9.4e-35 150.2 103 75.7
TAR623G0137 Trochodendron aralioides HOM05D004807 ORTHO05D005915 1.2e-34 149.8 103 77.7
Haze_20075 Corylus avellana HOM05D004807 ORTHO05D005915 2.1e-34 149.1 102 71.6
Gohir.A09G130500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 2.1e-34 149.1 103 73.8
TWI74G1245 Tripterygium wilfordii HOM05D004807 ORTHO05D005915 2.1e-34 149.1 103 74.8
MD14G1049600 Malus domestica HOM05D004807 ORTHO05D005915 2.3e-33 145.6 103 74.8
Aqoxy1G00442 Aquilegia oxysepala HOM05D004807 ORTHO05D005915 5.1e-33 144.4 103 70.9
Prupe.7G085900 Prunus persica HOM05D004807 ORTHO05D005915 1.1e-32 143.3 103 74.8
FAN05G3467 Fragaria x ananassa HOM05D004807 ORTHO05D005915 3.3e-32 141.7 104 75.0
FvH4_6g21460 Fragaria vesca HOM05D004807 ORTHO05D005915 4.4e-32 141.4 104 75.0
FAN02G2347 Fragaria x ananassa HOM05D004807 ORTHO05D005915 4.4e-32 141.4 104 75.0
RcHm_v2.0_Chr3g0478641 Rosa chinensis HOM05D004807 ORTHO05D005915 4.4e-32 141.4 104 76.0
CsaV3_3G038490 Cucumis sativus L. HOM05D004807 ORTHO05D005915 9.7e-32 140.2 109 68.8
CsaV3_7G005530 Cucumis sativus L. HOM05D004807 ORTHO05D005915 9.7e-32 140.2 109 68.8
FAN05G1427 Fragaria x ananassa HOM05D004807 ORTHO05D005915 9.7e-32 140.2 103 72.8
PSO528G0235 Papaver somniferum HOM05D004807 ORTHO05D005915 1.3e-31 139.8 103 69.9
Ca_09097_v3 Cicer arietinum L. HOM05D004807 ORTHO05D005915 1.7e-31 139.4 103 72.8
FAN14G4845 Fragaria x ananassa HOM05D004807 ORTHO05D005915 2.2e-31 139.0 104 74.0
Sc19g0006260 Simmondsia chinensis HOM05D004807 ORTHO05D005915 2.2e-31 139.0 104 71.2
ClCG10G017810 Citrullus lanatus HOM05D004807 ORTHO05D005915 2.8e-31 138.7 108 68.5
MELO3C009593.2 Cucumis melo HOM05D004807 ORTHO05D005915 3.7e-31 138.3 109 67.9
Sp3g10180 Schrenkiella parvula HOM05D004807 ORTHO05D005915 3.7e-31 138.3 103 67.0
AL3G23560 Arabidopsis lyrata HOM05D004807 ORTHO05D005915 4.8e-31 137.9 103 67.0
Lj1g0016427 Lotus japonicus HOM05D004807 ORTHO05D005915 4.8e-31 137.9 103 68.0
Hund19221 Selenicereus undatus HOM05D004807 ORTHO05D005915 4.8e-31 137.9 103 69.9
Sed0007842 Sechium edule HOM05D004807 ORTHO05D005915 6.3e-31 137.5 112 67.0
BcaB04g18703 Brassica carinata HOM05D004807 ORTHO05D005915 8.2e-31 137.1 103 67.0
BcaC01g04068 Brassica carinata HOM05D004807 ORTHO05D005915 8.2e-31 137.1 103 67.0
C03p45390 Brassica napus HOM05D004807 ORTHO05D005915 8.2e-31 137.1 103 67.0
BolC3t16806H Brassica oleracea HOM05D004807 ORTHO05D005915 8.2e-31 137.1 103 67.0
FAN09G2962 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.1e-30 136.7 104 73.1
PSO170G3481 Papaver somniferum HOM05D004807 ORTHO05D005915 1.1e-30 136.7 103 70.9
arahy.Tifrunner.gnm1.ann1.14IR3Z Arachis hypogaea HOM05D004807 ORTHO05D005915 1.4e-30 136.3 103 68.9
arahy.Tifrunner.gnm1.ann1.4PIV4R Arachis hypogaea HOM05D004807 ORTHO05D005915 1.4e-30 136.3 103 68.9
A03p37390 Brassica napus HOM05D004807 ORTHO05D005915 1.8e-30 136.0 103 66.0
BraA03t12900Z Brassica rapa HOM05D004807 ORTHO05D005915 1.8e-30 136.0 103 66.0
AT3G11960 Arabidopsis thaliana HOM05D004807 ORTHO05D005915 2.4e-30 135.6 103 66.0
EL10Ac3g06848 Beta vulgaris HOM05D004807 ORTHO05D005915 3.1e-30 135.2 104 71.2
Lalb_Chr25g0287671 Lupinus albus HOM05D004807 ORTHO05D005915 3.1e-30 135.2 109 66.1
Medtr7g107350 Medicago truncatula HOM05D004807 ORTHO05D005915 3.1e-30 135.2 104 72.1
THA.LOC104826780 Tarenaya hassleriana HOM05D004807 ORTHO05D005915 3.1e-30 135.2 107 71.0
BcaB06g25560 Brassica carinata HOM05D004807 ORTHO05D005915 4.1e-30 134.8 103 66.0
BcaC05g29309 Brassica carinata HOM05D004807 ORTHO05D005915 4.1e-30 134.8 103 66.0
C05p55980 Brassica napus HOM05D004807 ORTHO05D005915 4.1e-30 134.8 103 66.0
BolC5t34266H Brassica oleracea HOM05D004807 ORTHO05D005915 4.1e-30 134.8 103 66.0
Glyma.19G204200 Glycine max HOM05D004807 ORTHO05D005915 5.3e-30 134.4 103 68.0
A05p37420 Brassica napus HOM05D004807 ORTHO05D005915 1.2e-29 133.3 103 66.0
VMungo1383G3705 Vigna mungo HOM05D004807 ORTHO05D005915 1.2e-29 133.3 103 68.0
Aa31LG3G5560 Aethionema arabicum HOM05D004807 ORTHO05D005915 2.0e-29 132.5 104 67.3
Phvul.001G200200 Phaseolus vulgaris HOM05D004807 ORTHO05D005915 2.6e-29 132.1 103 67.0
CARHR086510 Cardamine hirsuta HOM05D004807 ORTHO05D005915 3.4e-29 131.7 102 64.7
Psat0s2035g0040 Pisum sativum HOM05D004807 ORTHO05D005915 3.4e-29 131.7 103 69.9
TPR.G32304 Trifolium pratense HOM05D004807 ORTHO05D005915 3.4e-29 131.7 103 70.9
Thhalv10019900m.g Eutrema salsugineum HOM05D004807 ORTHO05D005915 4.5e-29 131.3 103 65.0
AUR62026870 Chenopodium quinoa HOM05D004807 ORTHO05D005915 5.9e-29 131.0 103 67.0
Dinv25022 Davidia involucrata HOM05D004807 ORTHO05D005915 5.9e-29 131.0 88 77.3
Carub.0003s1129 Capsella rubella HOM05D004807 ORTHO05D005915 7.7e-29 130.6 103 64.1
AUR62015288 Chenopodium quinoa HOM05D004807 ORTHO05D005915 7.7e-29 130.6 103 67.0
Lsat_1_v5_gn_2_58060 Lactuca sativa HOM05D004807 ORTHO05D005915 2.9e-28 128.6 104 69.2
ATR0665G460 Amborella trichopoda HOM05D004807 ORTHO05D005915 6.5e-28 127.5 103 67.0
Rhsim03G0002200 Rhododendron simsii HOM05D004807 ORTHO05D005915 1.4e-27 126.3 71 88.7
Ah.04g153050 Amaranthus hybridus HOM05D004807 ORTHO05D005915 4.2e-27 124.8 104 64.4
Glyma.03G206600 Glycine max HOM05D004807 ORTHO05D005915 1.0e-25 120.2 89 69.7
unitig_0.g509 Utricularia gibba HOM05D004807 ORTHO05D005915 1.0e-25 120.2 103 64.1
CDE05G3662 Ceratophyllum demersum HOM05D004807 ORTHO05D005915 5.7e-24 114.4 103 60.2
AUR62032732 Chenopodium quinoa HOM05D004807 ORTHO05D005915 1.7e-23 112.8 85 65.9
SalBow6G5976 Salvia bowleyana HOM05D004807 ORTHO05D005915 2.8e-23 112.1 89 68.5
vmacro12556 Vaccinium macrocarpon HOM05D004807 ORTHO05D005915 4.8e-23 111.3 69 87.0
HanXRQChr14g0438891 Helianthus annuus HOM05D004807 ORTHO05D005915 8.2e-23 110.5 103 57.3
Zm00001eb302880 Zea mays HOM05D004807 ORTHO05D005915 8.2e-23 110.5 105 58.1
SEGI_25187 Sequoiadendron giganteum HOM05D004807 ORTHO05D005915 1.8e-22 109.4 105 59.0
Os07g0203700 Oryza sativa ssp. japonica HOM05D004807 ORTHO05D005915 3.1e-22 108.6 103 59.2
SGA_v2.0_scaffold105G30514 Striga asiatica HOM05D004807 ORTHO05D005915 3.1e-22 108.6 87 64.4
HPP92_017552 Vanilla planifolia HOM05D004807 ORTHO05D005915 4.1e-22 108.2 102 60.8
BraA05t22540Z Brassica rapa HOM05D004807 ORTHO05D005915 2.5e-19 99.0 65 73.8
Pp3c24_19520 Physcomitrium patens HOM05D004807 ORTHO05D005915 7.2e-19 97.4 104 51.0
AagrBONN_evm.TU.Sc2ySwM_228.687 Anthoceros agrestis HOM05D004807 ORTHO05D005915 5.2e-17 91.3 99 49.5
SMO276G0043 Selaginella moellendorffii HOM05D004807 ORTHO05D005915 5.2e-17 91.3 103 47.6
Mapoly0005s0200 Marchantia polymorpha HOM05D004807 ORTHO05D005915 6.7e-17 90.9 108 49.1
TPR.G10577 Trifolium pratense HOM05D004807 ORTHO05D005915 8.2e-15 84.0 105 47.6
CBR_g51523 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-11 72.8 110 40.9
Hma1.2p1_0516F.1_g170580 Hydrangea macrophylla HOM05D004807 ORTHO05D005915 3.2e-11 72.0 59 62.7


User provided reference genes

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