Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049760 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D005993 2.2e-57 225.3 109 100.0
Actinidia04131 Actinidia chinensis HOM05D000306 ORTHO05D005993 9.4e-32 140.2 97 74.2
Dinv41268 Davidia involucrata HOM05D000306 ORTHO05D005993 4.7e-31 137.9 97 72.2
Rhsim01G0006800 Rhododendron simsii HOM05D000306 ORTHO05D005993 1.8e-30 136.0 97 72.2
vmacro13109 Vaccinium macrocarpon HOM05D000306 ORTHO05D005993 3.0e-30 135.2 97 71.1
Hma1.2p1_1022F.1_g248760 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 1.7e-28 129.4 97 69.1
GSVIVG01029151001 Vitis vinifera HOM05D000306 ORTHO05D005993 1.7e-28 129.4 97 69.1
Ciclev10007423m.g Citrus clementina HOM05D000306 ORTHO05D005993 2.8e-28 128.6 97 66.0
TWI34G1047 Tripterygium wilfordii HOM05D000306 ORTHO05D005993 1.8e-27 125.9 97 66.0
CAN.G584.9 Capsicum annuum HOM05D000306 ORTHO05D005993 2.4e-27 125.6 97 67.0
Cpa.g.sc95.64 Carica papaya HOM05D000306 ORTHO05D005993 3.1e-27 125.2 103 60.2
Solyc07g006810.3 Solanum lycopersicum HOM05D000306 ORTHO05D005993 4.1e-27 124.8 97 66.0
Sopen07g002910 Solanum pennellii HOM05D000306 ORTHO05D005993 4.1e-27 124.8 97 66.0
QL02p097337 Quercus lobata HOM05D000306 ORTHO05D005993 7.0e-27 124.0 97 66.0
Aa31LG3G13440 Aethionema arabicum HOM05D000306 ORTHO05D005993 9.1e-27 123.6 97 63.9
CiPaw.07G190100 Carya illinoinensis HOM05D000306 ORTHO05D005993 1.2e-26 123.2 97 67.0
Nitab4.5_0000244g0320 Nicotiana tabacum HOM05D000306 ORTHO05D005993 1.2e-26 123.2 97 67.0
Atru.chr7.720 Acer truncatum HOM05D000306 ORTHO05D005993 1.6e-26 122.9 97 63.9
Sabra06G0131200 Salix brachista HOM05D000306 ORTHO05D005993 2.7e-26 122.1 97 64.9
TAR625G0692 Trochodendron aralioides HOM05D000306 ORTHO05D005993 2.7e-26 122.1 97 63.9
Lj9A687T82 Lonicera japonica HOM05D000306 ORTHO05D005993 3.5e-26 121.7 98 63.3
MD13G1267300 Malus domestica HOM05D000306 ORTHO05D005993 3.5e-26 121.7 97 63.9
Potri.006G170400 Populus trichocarpa HOM05D000306 ORTHO05D005993 3.5e-26 121.7 97 64.9
Prupe.1G089300 Prunus persica HOM05D000306 ORTHO05D005993 7.7e-26 120.6 97 63.9
PGR142G2544 Punica granatum HOM05D000306 ORTHO05D005993 7.7e-26 120.6 97 61.9
Haze_22118 Corylus avellana HOM05D000306 ORTHO05D005993 1.0e-25 120.2 97 63.9
Manes.06G023800 Manihot esculenta HOM05D000306 ORTHO05D005993 1.0e-25 120.2 97 64.9
Sc14g0001190 Simmondsia chinensis HOM05D000306 ORTHO05D005993 1.0e-25 120.2 97 63.9
Cfa013519 Carpinus fangiana HOM05D000306 ORTHO05D005993 2.3e-25 119.0 97 63.9
Glyma.13G094700 Glycine max HOM05D000306 ORTHO05D005993 2.3e-25 119.0 97 61.9
Lalb_Chr07g0180301 Lupinus albus HOM05D000306 ORTHO05D005993 2.3e-25 119.0 97 62.9
MSTRG.19696 Avicennia marina HOM05D000306 ORTHO05D005993 3.8e-25 118.2 97 63.9
Ca_21207_v3 Cicer arietinum L. HOM05D000306 ORTHO05D005993 3.8e-25 118.2 97 64.9
MBI14_g17347_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D005993 6.5e-25 117.5 97 62.9
VMungo1215G0493 Vigna mungo HOM05D000306 ORTHO05D005993 6.5e-25 117.5 97 60.8
arahy.Tifrunner.gnm1.ann1.6YA4AW Arachis hypogaea HOM05D000306 ORTHO05D005993 8.6e-25 117.1 98 62.2
FvH4_4g09130 Fragaria vesca HOM05D000306 ORTHO05D005993 8.6e-25 117.1 97 61.9
FAN17G3079 Fragaria x ananassa HOM05D000306 ORTHO05D005993 8.6e-25 117.1 97 61.9
CsaV3_1G031330 Cucumis sativus L. HOM05D000306 ORTHO05D005993 1.5e-24 116.3 97 61.9
Eucgr.C00186 Eucalyptus grandis HOM05D000306 ORTHO05D005993 1.5e-24 116.3 97 61.9
RcHm_v2.0_Chr4g0403051 Rosa chinensis HOM05D000306 ORTHO05D005993 1.5e-24 116.3 97 60.8
TPR.G5323 Trifolium pratense HOM05D000306 ORTHO05D005993 1.5e-24 116.3 97 62.9
AT5G57590 Arabidopsis thaliana HOM05D000306 ORTHO05D005993 1.9e-24 115.9 97 59.8
MELO3C017490.2 Cucumis melo HOM05D000306 ORTHO05D005993 1.9e-24 115.9 97 62.9
Duzib150G0339 Durio zibethinus HOM05D000306 ORTHO05D005993 1.9e-24 115.9 97 64.9
Migut.J01457 Erythranthe guttata HOM05D000306 ORTHO05D005993 1.9e-24 115.9 97 60.8
ClCG06G013170 Citrullus lanatus HOM05D000306 ORTHO05D005993 2.5e-24 115.5 97 60.8
Psat4g011120 Pisum sativum HOM05D000306 ORTHO05D005993 3.3e-24 115.2 97 62.9
FAN22G2400 Fragaria x ananassa HOM05D000306 ORTHO05D005993 4.2e-24 114.8 97 60.8
Sed0027913 Sechium edule HOM05D000306 ORTHO05D005993 4.2e-24 114.8 97 60.8
arahy.Tifrunner.gnm1.ann1.MG2J04 Arachis hypogaea HOM05D000306 ORTHO05D005993 5.5e-24 114.4 97 61.9
BcaB08g36111 Brassica carinata HOM05D000306 ORTHO05D005993 5.5e-24 114.4 97 58.8
Lj4g0011507 Lotus japonicus HOM05D000306 ORTHO05D005993 5.5e-24 114.4 97 61.9
AL8G33620 Arabidopsis lyrata HOM05D000306 ORTHO05D005993 7.2e-24 114.0 97 59.8
CANSAT11G2131 Cannabis sativa HOM05D000306 ORTHO05D005993 7.2e-24 114.0 97 60.8
DCAR_009913 Daucus carota HOM05D000306 ORTHO05D005993 7.2e-24 114.0 97 59.8
BcaC01g06481 Brassica carinata HOM05D000306 ORTHO05D005993 9.5e-24 113.6 97 59.8
Medtr4g128620 Medicago truncatula HOM05D000306 ORTHO05D005993 9.5e-24 113.6 97 60.8
Thhalv10012677m.g Eutrema salsugineum HOM05D000306 ORTHO05D005993 1.2e-23 113.2 97 58.8
Thecc.09G168600 Theobroma cacao HOM05D000306 ORTHO05D005993 1.2e-23 113.2 97 63.9
A03p12730 Brassica napus HOM05D000306 ORTHO05D005993 1.6e-23 112.8 97 58.8
C03p14920 Brassica napus HOM05D000306 ORTHO05D005993 1.6e-23 112.8 97 58.8
BolC3t13934H Brassica oleracea HOM05D000306 ORTHO05D005993 1.6e-23 112.8 97 58.8
BraA03t10584Z Brassica rapa HOM05D000306 ORTHO05D005993 1.6e-23 112.8 97 58.8
Cc06_g13470 Coffea canephora HOM05D000306 ORTHO05D005993 1.6e-23 112.8 103 56.3
Gorai.013G246300 Gossypium raimondii HOM05D000306 ORTHO05D005993 3.6e-23 111.7 97 62.9
Gohir.D13G216000 Gossypium hirsutum HOM05D000306 ORTHO05D005993 4.7e-23 111.3 97 62.9
PSO782G0277 Papaver somniferum HOM05D000306 ORTHO05D005993 4.7e-23 111.3 97 57.7
Sp6g19290 Schrenkiella parvula HOM05D000306 ORTHO05D005993 4.7e-23 111.3 97 57.7
PSO063G2401 Papaver somniferum HOM05D000306 ORTHO05D005993 6.1e-23 110.9 97 57.7
SGA_v2.0_scaffold69G23277 Striga asiatica HOM05D000306 ORTHO05D005993 6.1e-23 110.9 97 59.8
Nn8g40500 Nelumbo nucifera HOM05D000306 ORTHO05D005993 8.0e-23 110.5 97 59.8
Gohir.A13G211900 Gossypium hirsutum HOM05D000306 ORTHO05D005993 1.4e-22 109.8 97 60.8
Carub.0008s1810 Capsella rubella HOM05D000306 ORTHO05D005993 1.8e-22 109.4 97 59.8
Phvul.003G147900 Phaseolus vulgaris HOM05D000306 ORTHO05D005993 1.8e-22 109.4 97 57.7
BcaC05g28220 Brassica carinata HOM05D000306 ORTHO05D005993 2.3e-22 109.0 99 55.6
BcaC08g43477 Brassica carinata HOM05D000306 ORTHO05D005993 2.3e-22 109.0 99 55.6
C05p43000 Brassica napus HOM05D000306 ORTHO05D005993 2.3e-22 109.0 99 55.6
C06p08630 Brassica napus HOM05D000306 ORTHO05D005993 2.3e-22 109.0 99 55.6
C09p62180 Brassica napus HOM05D000306 ORTHO05D005993 2.3e-22 109.0 99 55.6
Lsat_1_v5_gn_7_54301 Lactuca sativa HOM05D000306 ORTHO05D005993 5.2e-22 107.8 103 57.3
BolC1t03728H Brassica oleracea HOM05D000306 ORTHO05D005993 2.0e-21 105.9 99 53.5
BcaC04g19951 Brassica carinata HOM05D000306 ORTHO05D005993 3.4e-21 105.1 97 56.7
A10p15010 Brassica napus HOM05D000306 ORTHO05D005993 3.4e-21 105.1 97 56.7
C01p37640 Brassica napus HOM05D000306 ORTHO05D005993 3.4e-21 105.1 99 53.5
BraA10t43578Z Brassica rapa HOM05D000306 ORTHO05D005993 3.4e-21 105.1 97 56.7
C09p49460 Brassica napus HOM05D000306 ORTHO05D005993 7.5e-21 104.0 99 56.6
unitig_749.g14164 Utricularia gibba HOM05D000306 ORTHO05D005993 7.5e-21 104.0 97 56.7
AUR62040000 Chenopodium quinoa HOM05D000306 ORTHO05D005993 1.3e-20 103.2 103 53.4
AUR62040306 Chenopodium quinoa HOM05D000306 ORTHO05D005993 1.3e-20 103.2 103 53.4
Os08g0245400 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D005993 1.3e-20 103.2 97 55.7
CDE02G3177 Ceratophyllum demersum HOM05D000306 ORTHO05D005993 2.2e-20 102.4 97 54.6
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 2.8e-20 102.1 103 54.4
HanXRQChr03g0068921 Helianthus annuus HOM05D000306 ORTHO05D005993 3.7e-20 101.7 103 52.4
ATR0580G146 Amborella trichopoda HOM05D000306 ORTHO05D005993 6.3e-20 100.9 97 54.6
Hund09018 Selenicereus undatus HOM05D000306 ORTHO05D005993 8.3e-20 100.5 97 57.7
Aqoxy7G03117 Aquilegia oxysepala HOM05D000306 ORTHO05D005993 1.4e-19 99.8 97 54.6
Zm00001eb412500 Zea mays HOM05D000306 ORTHO05D005993 1.4e-19 99.8 97 53.6
Ah.09g229770 Amaranthus hybridus HOM05D000306 ORTHO05D005993 3.1e-19 98.6 99 53.5
BolC9t57799H Brassica oleracea HOM05D000306 ORTHO05D005993 1.6e-18 96.3 89 58.4
Pp3c17_24020 Physcomitrium patens HOM05D000306 ORTHO05D005993 1.7e-17 92.8 97 50.5
SHI02942 Sapria himalayana HOM05D000306 ORTHO05D005993 5.6e-16 87.8 97 49.5
Mapoly0061s0099 Marchantia polymorpha HOM05D000306 ORTHO05D005993 8.0e-15 84.0 103 46.6
SMO146G0375 Selaginella moellendorffii HOM05D000306 ORTHO05D005993 2.3e-14 82.4 94 48.9
MELO3C020066.2 Cucumis melo HOM05D000306 ORTHO05D005993 3.4e-13 78.6 44 79.5
MELO3C034648.2 Cucumis melo HOM05D000306 ORTHO05D005993 5.8e-13 77.8 57 63.2
MELO3C031202.2 Cucumis melo HOM05D000306 ORTHO05D005993 2.9e-12 75.5 44 75.0
Peaxi162Scf00050g00628 Petunia axillaris HOM05D000306 ORTHO05D005993 2.9e-12 75.5 45 75.6
MELO3C033088.2 Cucumis melo HOM05D000306 ORTHO05D005993 1.1e-11 73.6 44 75.0
SEGI_37083 Sequoiadendron giganteum HOM05D000306 ORTHO05D005993 1.1e-11 73.6 85 44.7
HPP92_013429 Vanilla planifolia HOM05D000306 ORTHO05D005993 1.1e-11 73.6 70 57.1
MELO3C033059.2 Cucumis melo HOM05D000306 ORTHO05D005993 4.1e-11 71.6 44 72.7
BcaB01g04449 Brassica carinata HOM05D000306 ORTHO05D005993 3.5e-10 68.6 45 64.4
MELO3C032402.2 Cucumis melo HOM05D000306 ORTHO05D005993 6.0e-10 67.8 37 78.4
arahy.Tifrunner.gnm1.ann1.46R2K9 Arachis hypogaea HOM05D000306 ORTHO05D083075 4.3e-08 61.6 50 58.0
Cre06.g277200 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D005993 4.3e-08 61.6 95 41.1
CBR_g30689 Chara braunii HOM05D000306 ORTHO05D005993 9.5e-08 60.5 98 33.7
Oeu009845.1 Olea europaea HOM05D000306 ORTHO05D005993 9.5e-08 60.5 41 68.3


User provided reference genes

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