Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 5.9e-186 654.1 332 100.0
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 3.4e-157 558.5 344 87.8
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.2e-156 555.8 339 87.6
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 4.1e-155 551.6 345 85.2
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 4.1e-155 551.6 345 85.2
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 1.3e-153 546.6 344 83.4
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 5.1e-153 544.7 344 83.1
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 3.8e-148 528.5 343 80.8
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 1.2e-146 523.5 344 80.8
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 4.6e-146 521.5 345 79.7
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 5.6e-144 514.6 345 79.1
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 7.3e-144 514.2 344 78.5
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 7.3e-144 514.2 336 79.8
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 5.2e-142 508.1 351 77.8
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 1.2e-141 506.9 343 77.8
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 1.5e-141 506.5 346 79.2
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 2.0e-141 506.1 347 77.2
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 3.4e-141 505.4 344 77.0
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 3.4e-141 505.4 343 76.1
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 4.4e-141 505.0 337 77.2
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 5.8e-141 504.6 346 76.9
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 5.8e-141 504.6 344 77.0
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 7.6e-141 504.2 352 77.3
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 9.9e-141 503.8 346 77.2
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 1.3e-140 503.4 358 75.7
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 1.3e-140 503.4 344 77.6
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 2.2e-140 502.7 345 78.0
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 2.2e-140 502.7 343 77.0
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 2.9e-140 502.3 343 77.0
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 2.9e-140 502.3 344 77.0
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 4.9e-140 501.5 347 76.7
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 1.1e-139 500.4 327 78.9
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 1.4e-139 500.0 329 78.7
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 1.9e-139 499.6 343 76.4
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 2.4e-139 499.2 344 77.3
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 3.2e-139 498.8 345 77.4
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 5.4e-139 498.0 356 76.4
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 7.1e-139 497.7 320 80.0
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 9.3e-139 497.3 349 75.9
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 9.3e-139 497.3 346 76.6
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 2.1e-138 496.1 344 75.3
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 2.7e-138 495.7 347 75.2
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 3.5e-138 495.4 344 75.3
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 4.6e-138 495.0 345 75.4
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 4.6e-138 495.0 351 74.6
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 6.0e-138 494.6 347 75.8
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 1.0e-137 493.8 345 75.4
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 1.0e-137 493.8 351 74.4
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 1.3e-137 493.4 344 75.3
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 3.0e-137 492.3 347 75.5
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 3.9e-137 491.9 351 75.2
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 5.1e-137 491.5 353 74.8
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 1.1e-136 490.3 323 78.3
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 1.5e-136 490.0 348 73.9
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 1.5e-136 490.0 345 75.4
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 1.9e-136 489.6 336 75.9
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 4.3e-136 488.4 348 74.7
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 4.3e-136 488.4 347 74.6
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 5.6e-136 488.0 347 74.4
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 7.3e-136 487.6 326 78.2
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 7.3e-136 487.6 348 75.3
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 7.3e-136 487.6 344 74.7
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.3e-135 486.9 347 74.4
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 2.8e-135 485.7 344 74.1
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 3.6e-135 485.3 349 72.8
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 4.8e-135 485.0 342 75.4
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 8.1e-135 484.2 342 74.9
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 8.1e-135 484.2 349 72.5
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 8.1e-135 484.2 349 72.5
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 1.1e-134 483.8 332 75.6
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 1.4e-134 483.4 326 77.9
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 1.8e-134 483.0 325 76.3
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 4.0e-134 481.9 339 74.6
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 4.0e-134 481.9 347 74.1
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 4.0e-134 481.9 349 73.6
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 5.3e-134 481.5 325 76.0
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 6.9e-134 481.1 330 76.4
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 2.0e-133 479.6 344 73.5
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 2.6e-133 479.2 371 70.4
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 9.9e-133 477.2 331 74.0
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 1.3e-132 476.9 343 72.3
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 1.1e-131 473.8 345 75.1
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 1.1e-131 473.8 326 76.1
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 2.4e-131 472.6 331 74.6
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 5.4e-131 471.5 326 75.8
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 1.2e-130 470.3 343 74.3
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 6.0e-130 468.0 345 71.9
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 7.9e-130 467.6 340 74.1
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 1.3e-129 466.8 344 72.4
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 3.0e-129 465.7 344 71.8
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 3.9e-129 465.3 347 71.8
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 9.6e-128 460.7 349 70.5
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 1.3e-127 460.3 343 70.8
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 2.1e-127 459.5 352 69.6
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 2.8e-127 459.1 343 70.3
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 2.8e-127 459.1 343 70.3
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 2.8e-127 459.1 343 70.3
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 2.8e-127 459.1 323 72.4
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 3.7e-127 458.8 347 70.3
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 8.1e-127 457.6 347 69.7
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 8.1e-127 457.6 323 72.4
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 8.1e-127 457.6 323 72.1
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 8.1e-127 457.6 323 72.1
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 1.8e-126 456.4 351 68.9
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 1.8e-126 456.4 323 72.1
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 3.1e-126 455.7 333 71.5
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 4.0e-126 455.3 343 70.0
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 4.0e-126 455.3 343 70.0
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 9.0e-126 454.1 323 71.5
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 1.5e-125 453.4 343 69.1
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 4.5e-125 451.8 346 70.5
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 7.6e-125 451.1 323 71.5
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 1.3e-124 450.3 323 71.8
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 2.2e-124 449.5 343 68.2
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 6.0e-122 441.4 364 65.1
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 2.3e-121 439.5 344 69.2
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 2.4e-118 429.5 385 62.6
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 6.9e-118 427.9 346 64.7
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 5.8e-117 424.9 345 64.3
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 1.7e-116 423.3 349 63.9
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 4.9e-116 421.8 349 63.9
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 2.5e-115 419.5 320 65.9
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.2e-114 417.2 299 72.2
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 3.5e-114 415.6 323 68.1
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 3.5e-114 415.6 350 62.6
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 6.7e-113 411.4 296 74.7
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 6.7e-113 411.4 296 74.7
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 2.8e-111 406.0 347 64.0
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 2.8e-111 406.0 347 64.0
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.1e-110 404.1 315 65.1
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.2e-109 400.6 344 64.0
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 2.2e-108 396.4 231 84.0
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.1e-107 394.0 315 63.5
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 1.0e-105 387.5 315 62.2
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.2e-101 374.0 228 79.4
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 6.5e-100 368.2 318 59.4
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 1.4e-99 367.1 274 70.8
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 5.1e-97 358.6 322 58.1
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 8.8e-97 357.8 345 54.8
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 1.9e-91 340.1 198 83.8
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 2.3e-81 306.6 250 64.8
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 1.7e-79 300.4 255 62.7
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.0e-73 281.2 298 52.3
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 8.8e-73 278.1 185 78.9
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 1.8e-65 253.8 216 65.3
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 5.9e-61 238.8 165 69.1
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 5.6e-59 232.3 119 95.0
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 4.0e-57 226.1 123 89.4
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 1.2e-56 224.6 131 84.0
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 4.1e-54 216.1 122 81.1
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 3.9e-52 209.5 185 56.8
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 3.9e-52 209.5 185 56.8
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 5.4e-46 189.1 164 62.8
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 1.2e-45 188.0 164 62.8
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 1.5e-43 181.0 164 61.0
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 2.2e-31 140.6 118 66.9
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 5.1e-28 129.4 92 73.9
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 5.6e-27 125.9 92 71.7
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 7.3e-27 125.6 70 88.6
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.9e-22 110.9 127 49.6
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 4.6e-21 106.3 78 66.7
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 1.0e-20 105.1 71 71.8
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 8.7e-20 102.1 181 42.5
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 8.4e-15 85.5 51 78.4
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 1.1e-14 85.1 78 56.4
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 1.1e-11 75.1 51 74.5
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 3.7e-10 70.1 124 38.7
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 1.2e-08 65.1 42 81.0
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 2.6e-08 63.9 36 75.0
RhsimUnG0176100 Rhododendron simsii HOM05D000026 ORTHO05D000127 4.9e-07 59.7 57 59.6


User provided reference genes

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