Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049618 Camellia sinensis var. sinensis HOM05D000339 ORTHO05D033890 2.0e-113 412.5 221 100.0
CSS0012059 Camellia sinensis var. sinensis HOM05D000339 ORTHO05D033890 1.3e-112 409.8 221 99.1
Dinv27618 Davidia involucrata HOM05D000339 ORTHO05D000212 2.3e-29 133.3 183 51.4
GSVIVG01008424001 Vitis vinifera HOM05D000339 ORTHO05D000212 1.2e-28 131.0 179 52.0
QL10p028490 Quercus lobata HOM05D000339 ORTHO05D000212 1.5e-28 130.6 170 57.1
Haze_18839 Corylus avellana HOM05D000339 ORTHO05D000212 2.6e-28 129.8 171 52.0
Oeu046633.1 Olea europaea HOM05D000339 ORTHO05D000212 9.8e-28 127.9 173 52.0
CiPaw.15G142700 Carya illinoinensis HOM05D000339 ORTHO05D000212 1.3e-27 127.5 193 52.3
Cfa019667 Carpinus fangiana HOM05D000339 ORTHO05D000212 4.9e-27 125.6 171 50.3
CiPaw.16G093000 Carya illinoinensis HOM05D000339 ORTHO05D000212 4.9e-27 125.6 185 52.4
MD14G1235800 Malus domestica HOM05D000339 ORTHO05D000212 3.9e-24 115.9 195 45.6
Sabra15G0038100 Salix brachista HOM05D000339 ORTHO05D000212 4.3e-23 112.5 202 47.0
Sabra15G0057700 Salix brachista HOM05D000339 ORTHO05D000212 4.3e-23 112.5 201 47.3
Cc04_g06330 Coffea canephora HOM05D000339 ORTHO05D000212 5.6e-23 112.1 196 42.9
CAN.G1129.56 Capsicum annuum HOM05D000339 ORTHO05D000212 2.1e-22 110.2 203 40.4
Sabra15G0070800 Salix brachista HOM05D000454 ORTHO05D000212 2.1e-22 110.2 190 47.9
MD06G1231300 Malus domestica HOM05D000339 ORTHO05D000212 4.7e-22 109.0 192 43.8
Manes.06G007300 Manihot esculenta HOM05D000339 ORTHO05D000212 1.1e-21 107.8 189 45.5
VMungo0251G0580 Vigna mungo HOM05D000339 ORTHO05D000212 1.8e-21 107.1 186 43.0
Duzib205G0598 Durio zibethinus HOM05D000339 ORTHO05D000212 2.3e-21 106.7 181 52.5
Glyma.05G245900 Glycine max HOM05D000339 ORTHO05D000212 2.3e-21 106.7 190 44.2
Lj2g0012105 Lotus japonicus HOM05D000339 ORTHO05D000212 3.1e-21 106.3 167 45.5
Potri.012G047700 Populus trichocarpa HOM05D000339 ORTHO05D000212 4.0e-21 105.9 193 37.8
Phvul.002G329500 Phaseolus vulgaris HOM05D000339 ORTHO05D000212 5.2e-21 105.5 188 44.1
Potri.015G039100 Populus trichocarpa HOM05D000339 ORTHO05D000212 6.8e-21 105.1 181 42.5
Glyma.08G053702 Glycine max HOM05D000339 ORTHO05D000212 1.5e-20 104.0 187 42.8
Lj4g0005482 Lotus japonicus HOM05D000339 ORTHO05D000212 1.5e-20 104.0 185 39.5
Thecc.03G054500 Theobroma cacao HOM05D000339 ORTHO05D000212 2.0e-20 103.6 185 47.6
Lalb_Chr22g0353391 Lupinus albus HOM05D000339 ORTHO05D000212 7.5e-20 101.7 165 40.6
TAR374G1529 Trochodendron aralioides HOM05D000339 ORTHO05D000212 7.5e-20 101.7 177 42.4
Oeu015085.1 Olea europaea HOM05D000339 ORTHO05D000212 2.2e-19 100.1 175 42.3
Prupe.5G232600 Prunus persica HOM05D000339 ORTHO05D000212 6.4e-19 98.6 207 41.5
CSS0041104 Camellia sinensis var. sinensis HOM05D000339 ORTHO05D000212 1.1e-18 97.8 181 46.4
SalBow1G4625 Salvia bowleyana HOM05D000339 ORTHO05D000212 1.1e-18 97.8 174 40.8
CSS0038779 Camellia sinensis var. sinensis HOM05D000339 ORTHO05D000212 1.4e-18 97.4 180 45.0
Phvul.004G151575 Phaseolus vulgaris HOM05D000339 ORTHO05D000212 1.9e-18 97.1 190 39.5
Glyma.07G101000 Glycine max HOM05D000339 ORTHO05D000212 7.1e-18 95.1 188 41.0
VMungo0464G1747 Vigna mungo HOM05D000339 ORTHO05D000212 7.1e-18 95.1 233 36.5
FAN13G1871 Fragaria x ananassa HOM05D000339 ORTHO05D000212 1.2e-17 94.4 194 40.7
Nn3g18264 Nelumbo nucifera HOM05D000339 ORTHO05D000212 1.2e-17 94.4 169 42.6
Manes.14G170900 Manihot esculenta HOM05D000339 ORTHO05D000212 2.1e-17 93.6 206 47.6
PGSC0003DMG400005670 Solanum tuberosum HOM05D000339 ORTHO05D000212 3.5e-17 92.8 167 38.3
Nn4g24211 Nelumbo nucifera HOM05D000339 ORTHO05D000212 4.6e-17 92.4 198 38.9
Sopen03g037710 Solanum pennellii HOM05D000339 ORTHO05D000212 4.6e-17 92.4 171 36.8
FAN08G2756 Fragaria x ananassa HOM05D000339 ORTHO05D000212 6.0e-17 92.0 195 38.5
Solyc03g118770.4 Solanum lycopersicum HOM05D000339 ORTHO05D000212 7.8e-17 91.7 201 35.3
COL.COLO4_37684 Corchorus olitorius HOM05D000339 ORTHO05D000212 1.0e-16 91.3 179 44.1
TAR629G1086 Trochodendron aralioides HOM05D000339 ORTHO05D000212 2.3e-16 90.1 163 42.3
DCAR_023274 Daucus carota HOM05D000339 ORTHO05D000212 8.6e-16 88.2 185 42.2
Psat7g002400 Pisum sativum HOM05D000339 ORTHO05D000212 8.6e-16 88.2 179 36.3
Glyma.09G177800 Glycine max HOM05D000339 ORTHO05D000212 1.5e-15 87.4 189 44.4
RcHm_v2.0_Chr7g0178511 Rosa chinensis HOM05D000339 ORTHO05D000212 1.5e-15 87.4 191 38.7
Eucgr.B00945 Eucalyptus grandis HOM05D000339 ORTHO05D000212 2.5e-15 86.7 197 36.5
Lalb_Chr14g0370741 Lupinus albus HOM05D000339 ORTHO05D000212 2.5e-15 86.7 163 47.2
Duzib068G1069 Durio zibethinus HOM05D000339 ORTHO05D000212 3.3e-15 86.3 170 47.1
TWI60G1718 Tripterygium wilfordii HOM05D000339 ORTHO05D000212 4.3e-15 85.9 198 36.9
TWI81G0853 Tripterygium wilfordii HOM05D000339 ORTHO05D000212 4.3e-15 85.9 190 38.4
FvH4_5g17270 Fragaria vesca HOM05D000339 ORTHO05D000212 5.6e-15 85.5 195 37.4
FAN18G3640 Fragaria x ananassa HOM05D000339 ORTHO05D000212 5.6e-15 85.5 195 37.4
Ca_17194_v3 Cicer arietinum L. HOM05D000339 ORTHO05D000212 2.1e-14 83.6 198 40.4
FAN04G2675 Fragaria x ananassa HOM05D000339 ORTHO05D000212 2.1e-14 83.6 186 37.6
Duzib084G0984 Durio zibethinus HOM05D000339 ORTHO05D000212 2.8e-14 83.2 174 50.0
TAR622G0891 Trochodendron aralioides HOM05D000339 ORTHO05D000212 3.6e-14 82.8 178 45.5
Lalb_Chr05g0221701 Lupinus albus HOM05D000339 ORTHO05D000212 6.2e-14 82.0 183 37.7
Actinidia06842 Actinidia chinensis HOM05D000339 ORTHO05D000212 8.1e-14 81.6 189 45.5
MSTRG.9298 Avicennia marina HOM05D000339 ORTHO05D000212 8.1e-14 81.6 183 38.8
Sabra12G0033500 Salix brachista HOM05D000339 ORTHO05D000212 1.8e-13 80.5 182 34.1
Medtr8g107210 Medicago truncatula HOM05D000339 ORTHO05D000212 4.0e-13 79.3 191 34.0
Ciclev10008783m.g Citrus clementina HOM05D000339 ORTHO05D000212 5.2e-13 79.0 190 37.9
Nitab4.5_0016590g0010 Nicotiana tabacum HOM05D000339 ORTHO05D000212 1.5e-12 77.4 151 37.1
Atru.chr9.1742 Acer truncatum HOM05D000339 ORTHO05D000212 2.0e-12 77.0 170 41.8
Gohir.A12G269100 Gossypium hirsutum HOM05D000339 ORTHO05D000212 4.4e-12 75.9 188 38.8
Lj5P157T43 Lonicera japonica HOM05D000339 ORTHO05D033890 5.8e-12 75.5 132 40.9
MSTRG.4575 Avicennia marina HOM05D000339 ORTHO05D000212 1.7e-11 73.9 188 35.6
Gohir.D12G269500 Gossypium hirsutum HOM05D000339 ORTHO05D000212 1.7e-11 73.9 188 38.3
Actinidia28130 Actinidia chinensis HOM05D000339 ORTHO05D000212 4.9e-11 72.4 161 42.9
Gorai.008G289800 Gossypium raimondii HOM05D000339 ORTHO05D000212 8.4e-11 71.6 188 37.8
Oeu046167.1 Olea europaea HOM05D000339 ORTHO05D000212 8.4e-11 71.6 176 37.5
Peaxi162Scf00683g00044 Petunia axillaris HOM05D000339 ORTHO05D000212 8.4e-11 71.6 133 47.4
TPR.G1426 Trifolium pratense HOM05D000339 ORTHO05D000212 1.1e-10 71.2 213 37.6
Thecc.02G283500 Theobroma cacao HOM05D000339 ORTHO05D000212 2.1e-09 67.0 188 33.0
Duzib251G0913 Durio zibethinus HOM05D000339 ORTHO05D000212 3.5e-09 66.2 198 33.3
Aqoxy3G00084 Aquilegia oxysepala HOM05D000339 ORTHO05D000212 7.8e-09 65.1 141 42.6
Lalb_Chr16g0387031 Lupinus albus HOM05D000339 ORTHO05D000212 2.3e-08 63.5 144 36.8
Hma1.2p1_0096F.1_g047710 Hydrangea macrophylla HOM05D000339 ORTHO05D000212 2.5e-07 60.1 156 32.7
Potri.010G111400 Populus trichocarpa HOM05D000339 ORTHO05D000212 5.6e-07 58.9 178 30.9
Migut.D01555 Erythranthe guttata HOM05D000339 ORTHO05D000212 1.2e-06 57.8 171 39.8
Cpa.g.sc3.402 Carica papaya HOM05D000339 ORTHO05D000212 2.1e-06 57.0 202 40.6
Duzib268G0135 Durio zibethinus HOM05D000339 ORTHO05D000212 2.1e-06 57.0 185 30.8
Glyma.07G219400 Glycine max HOM05D000339 ORTHO05D000212 2.1e-06 57.0 174 33.3
MBI12_g38294_MAGBIO Magnolia biondii HOM05D000339 ORTHO05D000212 2.8e-06 56.6 162 36.4
MBI12_g41015_MAGBIO Magnolia biondii HOM05D000339 ORTHO05D000212 2.8e-06 56.6 162 36.4
Nitab4.5_0001456g0200 Nicotiana tabacum HOM05D000339 ORTHO05D000212 4.7e-06 55.8 76 48.7
Manes.17G078400 Manihot esculenta HOM05D000339 ORTHO05D000212 8.1e-06 55.1 144 34.0


User provided reference genes

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