Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 3.1e-56 221.5 106 100.0
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 3.8e-54 214.5 106 97.2
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 3.3e-37 158.3 105 78.1
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 1.8e-35 152.5 107 72.0
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 4.0e-35 151.4 105 74.3
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 6.8e-35 150.6 113 69.0
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 8.9e-35 150.2 105 71.4
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 1.2e-34 149.8 105 72.4
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 1.2e-34 149.8 105 73.3
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 1.2e-34 149.8 113 69.0
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 1.2e-34 149.8 113 69.0
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 2.0e-34 149.1 105 72.4
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 3.4e-34 148.3 105 71.4
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 3.4e-34 148.3 105 71.4
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 4.4e-34 147.9 110 70.0
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 5.7e-34 147.5 105 70.5
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 5.7e-34 147.5 105 70.5
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 5.7e-34 147.5 105 72.4
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 5.7e-34 147.5 105 70.5
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 7.5e-34 147.1 105 71.4
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 7.5e-34 147.1 103 71.8
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 7.5e-34 147.1 105 70.5
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 7.5e-34 147.1 113 66.4
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 7.5e-34 147.1 113 67.3
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 7.5e-34 147.1 103 72.8
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 9.8e-34 146.7 105 70.5
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 9.8e-34 146.7 105 72.4
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 9.8e-34 146.7 110 70.0
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 9.8e-34 146.7 105 71.4
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 1.7e-33 146.0 105 71.4
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 1.7e-33 146.0 105 70.5
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 1.7e-33 146.0 105 71.4
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 1.7e-33 146.0 105 71.4
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 1.7e-33 146.0 105 71.4
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 1.7e-33 146.0 106 69.8
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 1.7e-33 146.0 105 69.5
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 1.7e-33 146.0 103 72.8
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 1.7e-33 146.0 103 72.8
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 1.7e-33 146.0 105 69.5
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 1.7e-33 146.0 111 67.6
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 2.2e-33 145.6 103 72.8
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 2.9e-33 145.2 105 70.5
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 2.9e-33 145.2 105 70.5
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 2.9e-33 145.2 103 73.8
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 2.9e-33 145.2 105 70.5
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 3.7e-33 144.8 105 69.5
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 3.7e-33 144.8 103 72.8
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 3.7e-33 144.8 103 72.8
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 3.7e-33 144.8 103 72.8
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 3.7e-33 144.8 103 72.8
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 3.7e-33 144.8 103 72.8
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 3.7e-33 144.8 103 72.8
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 3.7e-33 144.8 104 72.1
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 3.7e-33 144.8 105 68.6
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 4.9e-33 144.4 105 70.5
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 4.9e-33 144.4 105 70.5
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 4.9e-33 144.4 105 70.5
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 4.9e-33 144.4 104 71.2
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 4.9e-33 144.4 105 68.6
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 4.9e-33 144.4 105 70.5
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 4.9e-33 144.4 105 69.5
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 6.4e-33 144.1 105 69.5
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 8.3e-33 143.7 108 67.6
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 8.3e-33 143.7 105 69.5
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 8.3e-33 143.7 105 69.5
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 1.1e-32 143.3 105 68.6
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.1e-32 143.3 101 72.3
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.1e-32 143.3 101 72.3
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 1.1e-32 143.3 105 69.5
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 1.1e-32 143.3 105 69.5
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 1.8e-32 142.5 105 68.6
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 1.8e-32 142.5 102 70.6
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 2.4e-32 142.1 104 71.2
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 2.4e-32 142.1 104 71.2
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 2.4e-32 142.1 105 70.5
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 4.1e-32 141.4 104 71.2
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 4.1e-32 141.4 104 71.2
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 4.1e-32 141.4 104 71.2
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 4.1e-32 141.4 104 71.2
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 4.1e-32 141.4 104 71.2
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 5.4e-32 141.0 105 67.6
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 5.4e-32 141.0 105 68.6
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 7.0e-32 140.6 103 69.9
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 7.0e-32 140.6 103 69.9
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 7.0e-32 140.6 103 69.9
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 7.0e-32 140.6 105 67.6
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 7.0e-32 140.6 103 70.9
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 7.0e-32 140.6 105 68.6
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 9.2e-32 140.2 107 66.4
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 9.2e-32 140.2 104 70.2
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 9.2e-32 140.2 107 69.2
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.6e-31 139.4 104 70.2
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 2.0e-31 139.0 104 69.2
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 2.7e-31 138.7 103 68.9
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 3.5e-31 138.3 105 69.5
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 4.6e-31 137.9 104 69.2
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 1.3e-30 136.3 104 68.3
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 1.7e-30 136.0 104 68.3
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 2.3e-30 135.6 105 65.7
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 2.3e-30 135.6 104 68.3
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 2.3e-30 135.6 104 68.3
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 2.3e-30 135.6 105 65.7
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 3.3e-29 131.7 104 66.3
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 4.3e-29 131.3 101 68.3
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 7.3e-29 130.6 104 65.4
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 1.4e-27 126.3 116 60.3
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 2.6e-26 122.1 105 61.0
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 9.2e-24 113.6 105 58.1
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 2.3e-22 109.0 97 58.8
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 4.3e-21 104.8 102 53.9
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 1.2e-20 103.2 104 50.0
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 3.4e-18 95.1 94 55.3
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 8.3e-17 90.5 79 63.3
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 3.2e-16 88.6 57 78.9
HanXRQChr17g0560491 Helianthus annuus HOM05D006328 ORTHO05D007721 1.5e-13 79.7 56 67.9
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 6.2e-12 74.3 45 77.8
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 5.2e-11 71.2 45 73.3
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 8.9e-11 70.5 44 68.2
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 4.1e-08 61.6 38 68.4
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 7.1e-08 60.8 45 64.4
Nn2g15764 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.3e-06 56.6 33 81.8


User provided reference genes

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