Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049549 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.6e-51 205.7 98 100.0
CSS0041944 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 6.7e-45 183.7 98 91.8
CSS0037375 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 3.3e-44 181.4 98 90.8
CSS0028054 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 9.7e-44 179.9 98 90.8
CSS0015976 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.3e-40 169.5 98 84.7
CSS0031232 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 1.2e-38 162.9 117 73.5
CSS0020344 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 3.9e-37 157.9 90 85.6
CSS0001881 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 8.2e-35 150.2 98 75.5
CSS0049107 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 1.7e-27 125.9 91 63.7
CSS0007605 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.1e-26 121.3 93 58.1
CSS0010509 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.0e-26 120.6 89 61.8
CSS0049418 Camellia sinensis var. sinensis HOM05D001185 ORTHO05D003777 3.3e-20 101.7 80 60.0
CSS0027359 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.8e-18 95.9 93 45.2
CSS0014297 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.2e-16 89.0 75 57.3
CSS0036470 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 6.5e-16 87.4 75 50.7
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 3.2e-15 85.1 88 35.2
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.7e-14 82.0 84 41.7
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.7e-14 81.3 85 36.5
CSS0014386 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-13 79.7 97 36.1
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.8e-13 79.3 85 35.3
CSS0020179 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.0e-13 78.6 84 41.7
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.0e-13 78.2 91 39.6
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.8e-13 77.0 85 37.6
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.8e-13 77.0 85 37.6
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.2e-12 76.6 85 37.6
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-12 75.9 86 39.5
CSS0033039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.4e-12 75.1 86 37.2
CSS0049818 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.4e-12 75.1 86 37.2
CSS0002074 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.5e-12 73.9 89 37.1
CSS0006955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.8e-12 73.6 84 40.5
CSS0032088 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.8e-12 73.6 84 38.1
CSS0045587 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.8e-12 73.6 90 36.7
CSS0045787 Camellia sinensis var. sinensis HOM05D014591 ORTHO05D000022 9.8e-12 73.6 90 36.7
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.3e-11 73.2 85 36.5
CSS0045195 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-10 70.1 85 38.8
Solyc07g056380.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 1.1e-10 70.1 93 37.6
vmacro09610 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 3.1e-10 68.6 88 38.6
CSS0037140 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-09 66.6 97 30.9
CSS0000227 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-09 65.5 48 60.4
CSS0020468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.5e-09 65.1 88 30.7
CSS0031822 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.7e-09 63.9 54 46.3
CSS0035385 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.0e-08 63.5 85 34.1
vmacro19136 Vaccinium macrocarpon HOM05D001065 ORTHO05D003103 1.0e-08 63.5 84 35.7
Actinidia35690 Actinidia chinensis HOM05D000003 ORTHO05D000022 1.7e-08 62.8 91 37.4
CSS0027610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-08 62.8 48 58.3
CSS0035139 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-08 62.8 48 58.3
Lj2C63T5 Lonicera japonica HOM05D016027 ORTHO05D000022 1.7e-08 62.8 87 36.8
CSS0007439 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.2e-08 62.4 84 33.3
CSS0038564 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.8e-08 61.6 63 41.3
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.5e-08 60.8 85 30.6
vmacro04810 Vaccinium macrocarpon HOM05D000301 ORTHO05D000022 6.5e-08 60.8 91 34.1
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 6.5e-08 60.8 86 32.6
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.5e-08 60.5 85 32.9
Atru.chr11.1308 Acer truncatum HOM05D000003 ORTHO05D000022 1.5e-07 59.7 85 35.3
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-07 59.7 89 36.0
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.9e-07 59.3 85 29.4
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.2e-07 58.5 86 32.6
vmacro01816 Vaccinium macrocarpon HOM05D000489 ORTHO05D000372 3.2e-07 58.5 82 34.1
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.2e-07 58.2 85 32.9
Lj9P217T13 Lonicera japonica HOM05D000003 ORTHO05D000022 4.2e-07 58.2 85 34.1
Atru.chr12.663 Acer truncatum HOM05D000003 ORTHO05D000022 7.2e-07 57.4 88 33.0
vmacro16872 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 7.2e-07 57.4 96 34.4
CSS0013630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.4e-07 57.0 68 35.3
Atru.chr7.120 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-06 56.6 76 38.2
CSS0007370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.2e-06 56.6 41 63.4
CSS0048939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.2e-06 56.6 82 30.5
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-06 56.2 85 34.1
Atru.chr5.2238 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-06 56.2 85 40.0
vmacro08980 Vaccinium macrocarpon HOM05D000055 ORTHO05D002202 1.6e-06 56.2 83 33.7
Atru.chr4.172 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-06 55.8 76 38.2
Actinidia03487 Actinidia chinensis HOM05D000003 ORTHO05D000022 2.1e-06 55.8 79 31.6
Atru.chr11.82 Acer truncatum HOM05D000003 ORTHO05D000022 2.7e-06 55.5 86 37.2
Atru.chr8.1100 Acer truncatum HOM05D000003 ORTHO05D000022 2.7e-06 55.5 87 37.9
COL.COLO4_15712 Corchorus olitorius HOM05D066797 ORTHO05D029099 2.7e-06 55.5 90 30.0
vmacro06797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 2.7e-06 55.5 87 33.3
Atru.chr11.1190 Acer truncatum HOM05D000003 ORTHO05D000022 3.6e-06 55.1 88 31.8
Atru.chr3.1552 Acer truncatum HOM05D000003 ORTHO05D000022 3.6e-06 55.1 76 35.5
CSS0039165 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.6e-06 55.1 58 39.7
QL01p016530 Quercus lobata HOM05D000003 ORTHO05D000022 3.6e-06 55.1 78 35.9
vmacro01820 Vaccinium macrocarpon HOM05D001647 ORTHO05D001191 3.6e-06 55.1 89 32.6
Atru.chr1.276 Acer truncatum HOM05D000003 ORTHO05D000022 4.7e-06 54.7 81 33.3
Atru.chr3.2067 Acer truncatum HOM05D000003 ORTHO05D000022 4.7e-06 54.7 91 34.1
CSS0006381 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.7e-06 54.7 74 31.1
COL.COLO4_30280 Corchorus olitorius HOM05D000155 ORTHO05D000022 4.7e-06 54.7 89 31.5
Lj1P688T36 Lonicera japonica HOM05D000155 ORTHO05D000022 4.7e-06 54.7 88 31.8
Lj4P794T17 Lonicera japonica HOM05D016027 ORTHO05D000022 4.7e-06 54.7 83 31.3
Atru.chr4.29 Acer truncatum HOM05D000003 ORTHO05D000022 6.1e-06 54.3 90 35.6


User provided reference genes

Program Settings