Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.6e-135 486.1 244 100.0
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.1e-132 475.7 244 98.0
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 1.3e-118 429.9 235 90.2
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 5.1e-118 427.9 244 87.7
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 4.0e-115 418.3 239 90.0
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 6.9e-115 417.5 266 81.6
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 2.0e-114 416.0 233 85.8
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 3.4e-114 415.2 234 86.8
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 1.7e-113 412.9 237 86.1
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 1.1e-112 410.2 233 84.1
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 1.9e-112 409.5 236 84.7
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 3.2e-112 408.7 233 85.0
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 7.1e-112 407.5 234 85.0
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 9.3e-112 407.1 237 82.3
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 2.7e-111 405.6 237 81.9
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 3.5e-111 405.2 238 81.5
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 4.6e-111 404.8 242 82.2
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 1.0e-110 403.7 238 82.8
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 1.0e-110 403.7 238 82.8
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 3.0e-110 402.1 242 80.6
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 5.1e-110 401.4 242 80.2
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 5.1e-110 401.4 233 83.7
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 6.6e-110 401.0 238 81.1
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 6.6e-110 401.0 238 81.1
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 6.6e-110 401.0 237 81.4
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 4.3e-109 398.3 235 81.7
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 7.3e-109 397.5 241 81.7
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 7.3e-109 397.5 238 81.1
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 1.3e-108 396.7 250 78.0
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 1.3e-108 396.7 231 83.5
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 1.6e-108 396.4 235 80.9
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 2.1e-108 396.0 221 87.3
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 6.2e-108 394.4 236 81.4
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 8.1e-108 394.0 236 81.4
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 8.1e-108 394.0 245 80.0
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 1.1e-107 393.7 242 79.8
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 2.4e-107 392.5 235 81.7
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 6.9e-107 391.0 236 80.1
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 9.0e-107 390.6 235 80.0
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 2.0e-106 389.4 235 80.9
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 2.6e-106 389.0 236 78.8
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 3.4e-106 388.7 237 80.6
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 7.6e-106 387.5 242 78.5
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 7.6e-106 387.5 235 78.3
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.3e-105 386.7 256 76.6
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.7e-105 386.3 272 72.1
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 2.2e-105 386.0 237 76.8
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 2.9e-105 385.6 237 81.0
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 6.4e-105 384.4 231 78.8
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 6.4e-105 384.4 247 76.1
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 8.4e-105 384.0 237 79.3
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 1.1e-104 383.6 237 78.5
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 1.1e-104 383.6 238 76.5
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 2.4e-104 382.5 237 76.8
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 3.2e-104 382.1 235 77.9
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 3.2e-104 382.1 234 77.4
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 5.4e-104 381.3 235 77.4
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 9.3e-104 380.6 235 77.4
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 9.3e-104 380.6 234 76.9
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.2e-103 380.2 231 79.2
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 2.1e-103 379.4 223 80.7
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 7.9e-103 377.5 233 76.0
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.8e-102 376.3 236 75.8
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.8e-102 376.3 236 75.8
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 2.3e-102 375.9 237 75.9
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 3.9e-102 375.2 237 74.7
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 3.9e-102 375.2 236 75.8
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 5.1e-102 374.8 237 74.7
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 5.1e-102 374.8 237 74.7
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 5.1e-102 374.8 237 74.7
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 6.7e-102 374.4 229 79.9
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 3.3e-101 372.1 237 76.4
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 9.6e-101 370.5 232 76.3
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 1.3e-100 370.2 237 75.5
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 3.7e-100 368.6 234 74.8
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.3e-97 360.1 233 73.4
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 1.7e-97 359.8 238 74.8
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 4.9e-97 358.2 236 70.8
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 3.2e-96 355.5 281 64.4
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 4.2e-96 355.1 234 76.1
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 6.0e-95 351.3 204 83.8
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.3e-94 350.1 256 68.0
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 3.9e-94 348.6 227 73.1
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 3.9e-94 348.6 227 72.2
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.1e-93 347.1 227 72.7
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 1.4e-91 340.1 236 71.6
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 1.8e-91 339.7 205 81.5
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 6.9e-91 337.8 280 67.1
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.6e-90 335.9 249 66.7
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 8.4e-89 330.9 258 64.0
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 1.4e-88 330.1 242 73.6
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 5.7e-85 318.2 195 78.5
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 9.0e-83 310.8 191 80.1
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 1.2e-82 310.5 227 66.1
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 7.6e-82 307.8 195 79.5
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 1.7e-81 306.6 226 64.6
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.4e-80 303.5 228 67.1
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 4.2e-80 302.0 206 72.3
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.0e-78 297.4 196 77.6
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 5.9e-74 281.6 297 52.5
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 5.0e-73 278.5 155 85.2
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 3.2e-72 275.8 237 57.4
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 7.0e-67 258.1 227 60.4
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 7.0e-67 258.1 196 69.9
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 1.2e-66 257.3 220 56.8
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 6.5e-65 251.5 225 54.7
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 6.1e-63 245.0 182 68.1
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 6.1e-63 245.0 182 68.1
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 1.4e-62 243.8 162 71.0
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 3.0e-62 242.7 149 79.2
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 1.2e-58 230.7 221 51.1
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 2.5e-48 196.4 122 77.9
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 7.0e-43 178.3 93 98.9
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 9.1e-43 177.9 128 70.3
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 5.5e-40 168.7 164 56.1
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 2.0e-37 160.2 118 70.3
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 1.7e-28 130.6 90 72.2
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 9.2e-27 124.8 86 70.9
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 4.6e-26 122.5 61 95.1
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 2.5e-24 116.7 71 74.6
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 1.4e-22 110.9 55 90.9
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 4.1e-19 99.4 109 56.0
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 3.9e-17 92.8 65 70.8
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.8e-14 84.0 239 27.6
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 7.8e-10 68.6 72 50.0


User provided reference genes

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