Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 1.3e-119 433.0 207 100.0
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 5.3e-108 394.4 209 90.4
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 9.9e-107 390.2 209 88.0
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 2.2e-106 389.0 209 88.0
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 1.9e-105 386.0 209 87.6
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 3.2e-105 385.2 209 87.6
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 9.3e-105 383.6 209 86.6
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 1.2e-104 383.3 209 86.6
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 1.6e-104 382.9 209 88.0
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 4.6e-104 381.3 209 87.6
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 6.0e-104 380.9 209 86.1
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 7.9e-104 380.6 209 87.6
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 1.3e-103 379.8 209 88.0
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 3.0e-103 378.6 209 86.6
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 3.9e-103 378.3 209 87.1
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 3.3e-102 375.2 209 85.2
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 4.3e-102 374.8 209 86.1
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 4.3e-102 374.8 209 85.2
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 5.6e-102 374.4 208 85.6
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 7.4e-102 374.0 208 85.6
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 85.6
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 2.1e-101 372.5 208 85.6
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 3.7e-101 371.7 209 84.7
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 8.2e-101 370.5 208 85.1
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 1.1e-100 370.2 209 85.2
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 1.8e-100 369.4 208 83.2
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 1.8e-100 369.4 208 86.5
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 1.8e-100 369.4 209 84.7
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 1.8e-100 369.4 209 84.7
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 3.1e-100 368.6 209 84.2
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 4.0e-100 368.2 209 84.7
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 4.0e-100 368.2 209 83.3
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 4.0e-100 368.2 209 84.7
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 1.2e-99 366.7 208 84.1
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 1.5e-99 366.3 209 84.2
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 82.8
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 84.2
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 83.7
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 2.6e-99 365.5 209 84.2
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 3.4e-99 365.2 209 82.8
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 5.8e-99 364.4 209 82.8
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 2.2e-98 362.5 209 83.7
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.9e-98 362.1 208 82.7
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 2.9e-98 362.1 209 81.8
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 6.5e-98 360.9 209 82.3
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 8.4e-98 360.5 209 82.8
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 8.4e-98 360.5 209 82.8
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 8.4e-98 360.5 225 80.0
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 1.1e-97 360.1 209 82.8
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 1.1e-97 360.1 209 82.8
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 1.1e-97 360.1 209 82.3
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 1.9e-97 359.4 209 81.8
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 3.2e-97 358.6 220 80.0
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 3.2e-97 358.6 209 81.8
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 4.2e-97 358.2 207 82.1
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 5.5e-97 357.8 209 81.3
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 5.5e-97 357.8 243 73.7
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 7.1e-97 357.5 215 81.9
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 7.1e-97 357.5 209 81.3
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 1.2e-96 356.7 209 80.9
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 1.6e-96 356.3 207 81.6
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 2.7e-96 355.5 208 82.2
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 2.7e-96 355.5 209 80.9
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 2.7e-96 355.5 209 82.3
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 4.6e-96 354.8 209 81.8
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 6.0e-96 354.4 209 80.4
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 6.0e-96 354.4 209 80.9
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 6.0e-96 354.4 209 81.3
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 7.9e-96 354.0 207 81.2
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 7.9e-96 354.0 209 80.4
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 7.9e-96 354.0 229 77.3
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 1.0e-95 353.6 209 80.9
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.3e-95 353.2 208 79.8
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 1.8e-95 352.8 209 78.0
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 1.8e-95 352.8 208 80.8
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 1.8e-95 352.8 209 81.3
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 2.3e-95 352.4 207 81.2
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 2.3e-95 352.4 209 80.9
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 3.0e-95 352.1 209 81.3
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 3.0e-95 352.1 209 81.3
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 3.9e-95 351.7 209 80.4
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 8.7e-95 350.5 229 76.4
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 1.1e-94 350.1 207 77.3
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 2.5e-94 349.0 209 78.9
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 5.7e-94 347.8 239 73.6
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 2.2e-93 345.9 207 78.7
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 5.3e-92 341.3 187 88.2
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 2.6e-91 339.0 191 84.8
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 4.5e-91 338.2 209 77.5
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 1.0e-90 337.0 190 85.8
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 1.7e-90 336.3 187 87.2
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 3.8e-90 335.1 206 76.2
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 8.5e-90 334.0 187 85.6
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 1.6e-88 329.7 209 73.7
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 2.3e-87 325.9 189 81.0
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 3.3e-86 322.0 208 74.0
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 4.3e-86 321.6 190 80.5
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 7.4e-86 320.9 196 78.6
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 2.2e-85 319.3 208 71.2
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 2.8e-85 318.9 288 59.0
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 4.8e-85 318.2 193 79.8
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 2.4e-84 315.8 185 82.2
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 5.5e-81 304.7 165 86.7
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 2.1e-80 302.8 209 72.2
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 8.8e-79 297.4 205 68.3
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 1.4e-76 290.0 196 72.4
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 4.2e-73 278.5 150 88.0
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 5.7e-70 268.1 165 77.0
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 3.1e-68 262.3 178 70.2
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 4.1e-68 261.9 202 62.4
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 5.0e-66 255.0 209 65.1
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 1.5e-65 253.4 206 59.7
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 5.7e-62 241.5 167 69.5
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 1.2e-59 233.8 210 54.3
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.8e-55 219.9 135 77.8
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 1.1e-52 210.7 204 51.5
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 2.0e-46 189.9 151 64.2
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 4.1e-44 182.2 206 45.1
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 1.9e-41 173.3 206 41.3
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 2.2e-37 159.8 170 45.9
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 3.2e-36 156.0 149 58.4
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 1.2e-35 154.1 126 61.9
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.7e-34 150.2 84 85.7
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 1.1e-31 141.0 226 38.1
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 1.5e-30 137.1 84 81.0
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 1.3e-29 134.0 135 49.6
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 2.3e-26 123.2 74 75.7
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.6e-19 100.5 76 65.8
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 2.1e-16 90.1 43 93.0


User provided reference genes

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