Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049266 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 7.6e-282 973.4 572 100.0
Dinv14556 Davidia involucrata HOM05D001562 ORTHO05D001437 3.3e-51 207.2 276 58.0
Thecc.05G236800 Theobroma cacao HOM05D001562 ORTHO05D001437 7.9e-45 186.0 235 62.1
Prupe.7G025900 Prunus persica HOM05D001562 ORTHO05D001437 1.0e-44 185.7 285 61.1
Duzib177G1059 Durio zibethinus HOM05D001562 ORTHO05D001437 2.1e-42 177.9 287 57.8
COL.COLO4_33469 Corchorus olitorius HOM05D001562 ORTHO05D001437 8.1e-42 176.0 243 57.6
Duzib106G1733 Durio zibethinus HOM05D001562 ORTHO05D001437 6.9e-41 172.9 245 54.3
QL07p016005 Quercus lobata HOM05D001562 ORTHO05D001437 2.0e-40 171.4 318 48.7
Duzib128G1788 Durio zibethinus HOM05D001562 ORTHO05D001437 2.6e-40 171.0 284 58.8
TWI34G0920 Tripterygium wilfordii HOM05D001562 ORTHO05D001437 2.6e-40 171.0 281 58.4
Atru.chr2.1611 Acer truncatum HOM05D001562 ORTHO05D001437 7.6e-40 169.5 280 56.4
Ciclev10031118m.g Citrus clementina HOM05D001562 ORTHO05D001437 1.0e-39 169.1 314 50.3
Cfa019883 Carpinus fangiana HOM05D001562 ORTHO05D001437 6.5e-39 166.4 320 50.6
Gorai.007G252400 Gossypium raimondii HOM05D001562 ORTHO05D001437 1.1e-38 165.6 227 57.7
DCAR_013503 Daucus carota HOM05D001562 ORTHO05D001437 1.4e-38 165.2 272 56.2
CiPaw.09G053200 Carya illinoinensis HOM05D001562 ORTHO05D001437 4.2e-38 163.7 313 53.7
Gohir.D11G238400 Gossypium hirsutum HOM05D001562 ORTHO05D001437 4.2e-38 163.7 227 56.8
Haze_20368 Corylus avellana HOM05D001562 ORTHO05D001437 7.1e-38 162.9 287 54.4
Nitab4.5_0001296g0060 Nicotiana tabacum HOM05D001562 ORTHO05D001437 1.2e-37 162.2 276 57.6
MD12G1014900 Malus domestica HOM05D001562 ORTHO05D001437 6.0e-37 159.8 229 59.0
Glyma.05G087600 Glycine max HOM05D001562 ORTHO05D001437 8.7e-36 156.0 277 49.1
CSS0032909 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 1.9e-35 154.8 94 83.0
TAR633G0613 Trochodendron aralioides HOM05D001562 ORTHO05D001437 7.4e-35 152.9 277 54.9
CSS0022694 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 2.1e-34 151.4 97 79.4
Hma1.2p1_0165F.1_g073360 Hydrangea macrophylla HOM05D001562 ORTHO05D001437 8.2e-34 149.4 280 54.6
Peaxi162Scf00827g00063 Petunia axillaris HOM05D001562 ORTHO05D001437 1.1e-33 149.1 291 57.4
TWI32G0837 Tripterygium wilfordii HOM05D001562 ORTHO05D001437 1.1e-33 149.1 282 59.2
MD14G1012500 Malus domestica HOM05D001562 ORTHO05D001437 5.3e-33 146.7 228 55.3
Manes.09G134600 Manihot esculenta HOM05D001562 ORTHO05D001437 5.3e-33 146.7 280 55.7
Solyc11g012740.2 Solanum lycopersicum HOM05D001562 ORTHO05D001437 6.9e-33 146.4 289 48.4
Sopen11g007480 Solanum pennellii HOM05D001562 ORTHO05D001437 1.2e-32 145.6 289 48.4
CSS0037956 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 2.0e-32 144.8 101 75.2
CSS0027355 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 2.6e-32 144.4 89 83.1
Lalb_Chr21g0317331 Lupinus albus HOM05D001562 ORTHO05D001437 3.4e-32 144.1 277 45.5
CSS0038915 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 1.3e-31 142.1 95 74.7
Lalb_Chr06g0174171 Lupinus albus HOM05D001562 ORTHO05D001437 2.2e-31 141.4 316 43.0
RcHm_v2.0_Chr3g0495551 Rosa chinensis HOM05D001562 ORTHO05D001437 3.8e-31 140.6 275 50.5
CSS0011986 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 5.0e-31 140.2 101 72.3
CSS0023844 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 8.4e-31 139.4 82 87.8
CSS0015501 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 1.9e-30 138.3 101 71.3
Dinv37043 Davidia involucrata HOM05D001562 ORTHO05D001437 1.2e-29 135.6 204 58.8
ClCG10G016720 Citrullus lanatus HOM05D001562 ORTHO05D001437 4.6e-29 133.7 291 48.5
CSS0036654 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 1.3e-28 132.1 82 84.1
Nn2g14206 Nelumbo nucifera HOM05D001562 ORTHO05D001437 1.3e-28 132.1 320 47.2
CiPaw.10G044900 Carya illinoinensis HOM05D001562 ORTHO05D001437 5.7e-27 126.7 244 56.1
Ca_04454_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 1.3e-26 125.6 312 42.6
DCAR_016950 Daucus carota HOM05D001562 ORTHO05D001437 3.7e-26 124.0 236 44.9
Gohir.A11G224900 Gossypium hirsutum HOM05D001562 ORTHO05D001437 3.7e-26 124.0 136 52.2
Eucgr.A02162 Eucalyptus grandis HOM05D001562 ORTHO05D001437 6.3e-26 123.2 283 47.7
CsaV3_3G039620 Cucumis sativus L. HOM05D001562 ORTHO05D001437 8.2e-26 122.9 321 44.9
Glyma.03G004900 Glycine max HOM05D001562 ORTHO05D001437 1.1e-25 122.5 255 40.8
VMungo1383G0082 Vigna mungo HOM05D001562 ORTHO05D001437 1.4e-25 122.1 183 43.7
CANSAT64G1075 Cannabis sativa HOM05D001562 ORTHO05D001437 1.8e-25 121.7 278 47.5
RhsimUnG0023000 Rhododendron simsii HOM05D001562 ORTHO05D001437 1.8e-25 121.7 278 54.7
Lalb_Chr14g0365071 Lupinus albus HOM05D001562 ORTHO05D001437 3.1e-25 120.9 237 45.1
EL10Ac5g11646 Beta vulgaris HOM05D001562 ORTHO05D001437 6.9e-25 119.8 365 40.0
CSS0036845 Camellia sinensis var. sinensis HOM05D005820 ORTHO05D007116 6.9e-25 119.8 95 69.5
Cc00_g08630 Coffea canephora HOM05D001562 ORTHO05D001437 2.0e-24 118.2 278 44.6
Oeu039190.1 Olea europaea HOM05D001562 ORTHO05D001437 3.4e-24 117.5 281 51.6
FvH4_1g29400 Fragaria vesca HOM05D001562 ORTHO05D001437 1.3e-23 115.5 225 52.4
FAN19G2359 Fragaria x ananassa HOM05D001562 ORTHO05D001437 1.3e-23 115.5 225 52.4
Phvul.001G102901 Phaseolus vulgaris HOM05D001562 ORTHO05D001437 2.9e-23 114.4 263 43.0
FAN26G1485 Fragaria x ananassa HOM05D001562 ORTHO05D001437 5.0e-23 113.6 225 52.0
MELO3C009704.2 Cucumis melo HOM05D001562 ORTHO05D001437 6.5e-23 113.2 321 44.5
Medtr6g027180 Medicago truncatula HOM05D001562 ORTHO05D001437 2.5e-22 111.3 309 43.0
arahy.Tifrunner.gnm1.ann1.F8BNUE Arachis hypogaea HOM05D001562 ORTHO05D001437 3.2e-22 110.9 240 46.2
arahy.Tifrunner.gnm1.ann1.UT2HDF Arachis hypogaea HOM05D001562 ORTHO05D001437 3.2e-22 110.9 240 46.2
Psat1g088240 Pisum sativum HOM05D001562 ORTHO05D001437 5.5e-22 110.2 312 42.6
Sed0017141 Sechium edule HOM05D001562 ORTHO05D001437 5.5e-22 110.2 286 44.1
Sed0010319 Sechium edule HOM05D001562 ORTHO05D001437 9.4e-22 109.4 278 48.6
TPR.G33954 Trifolium pratense HOM05D001562 ORTHO05D001437 9.4e-22 109.4 329 36.2
AUR62037076 Chenopodium quinoa HOM05D001562 ORTHO05D001437 1.0e-20 105.9 183 41.5
FAN28G2700 Fragaria x ananassa HOM05D001562 ORTHO05D001437 5.1e-20 103.6 134 54.5
FAN23G1244 Fragaria x ananassa HOM05D001562 ORTHO05D001437 8.8e-20 102.8 253 47.4
PGR042G2556 Punica granatum HOM05D001562 ORTHO05D001437 1.1e-19 102.4 301 42.9
Glyma.19G121100 Glycine max HOM05D001562 ORTHO05D001437 1.5e-19 102.1 203 45.3
Lj1g0001304 Lotus japonicus HOM05D001562 ORTHO05D001437 3.7e-18 97.4 221 46.2
Aqoxy1G00005 Aquilegia oxysepala HOM05D001562 ORTHO05D001437 1.4e-17 95.5 290 49.3
Psat3g084560 Pisum sativum HOM05D001562 ORTHO05D001437 1.8e-17 95.1 277 39.7
Ca_03432_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 5.3e-17 93.6 245 42.0
HanXRQChr10g0298571 Helianthus annuus HOM05D001562 ORTHO05D001437 1.2e-16 92.4 143 50.3
TPR.G20663 Trifolium pratense HOM05D001562 ORTHO05D001437 1.5e-16 92.0 222 43.7
Oeu036469.1 Olea europaea HOM05D001562 ORTHO05D001437 2.9e-15 87.8 274 48.2
MSTRG.26199 Avicennia marina HOM05D001562 ORTHO05D001437 5.0e-15 87.0 277 46.9
AUR62036494 Chenopodium quinoa HOM05D001562 ORTHO05D001437 6.5e-15 86.7 183 37.2
ECA247G2619 Erigeron canadensis HOM05D001562 ORTHO05D001437 1.9e-14 85.1 167 49.7
MSTRG.6265 Avicennia marina HOM05D001562 ORTHO05D001437 3.6e-13 80.9 175 44.6
Hund15148 Selenicereus undatus HOM05D001562 ORTHO05D001437 1.1e-11 75.9 379 33.5
Medtr7g087450 Medicago truncatula HOM05D001562 ORTHO05D001437 3.3e-11 74.3 296 35.8
MBI19_g15084_MAGBIO Magnolia biondii HOM05D001562 ORTHO05D001437 5.7e-11 73.6 304 40.1
Lsat_1_v5_gn_9_32321 Lactuca sativa HOM05D002043 ORTHO05D002207 1.1e-09 69.3 138 46.4
Ah.12g062100 Amaranthus hybridus HOM05D001562 ORTHO05D001437 1.4e-09 68.9 173 41.6
PSO384G0282 Papaver somniferum HOM05D001562 ORTHO05D001437 3.1e-09 67.8 239 43.9
PSO339G4702 Papaver somniferum HOM05D001562 ORTHO05D001437 2.0e-08 65.1 271 46.9
Migut.K00188 Erythranthe guttata HOM05D001562 ORTHO05D001437 2.2e-07 61.6 312 39.7
CSS0026122 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-07 60.8 65 52.3
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.5e-07 59.7 45 66.7
HPP92_007505 Vanilla planifolia HOM05D001562 ORTHO05D001437 8.5e-07 59.7 246 35.8
CSS0038845 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D113596 3.2e-06 57.8 68 51.5
CAN.G1156.19 Capsicum annuum HOM05D001562 ORTHO05D001437 9.4e-06 56.2 139 50.4


User provided reference genes

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