Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 1.7e-122 442.6 214 100.0
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 5.5e-92 341.3 214 76.2
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 2.7e-91 339.0 217 75.6
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.0e-90 337.0 214 75.2
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 6.7e-90 334.3 217 74.7
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 3.3e-89 332.0 199 80.4
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 5.7e-89 331.3 217 72.4
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 1.1e-87 327.0 217 69.6
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 8.5e-85 317.4 217 69.6
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 9.4e-84 313.9 217 71.0
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 7.9e-83 310.8 211 72.5
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 1.4e-82 310.1 214 70.1
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 5.1e-82 308.1 204 74.5
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 4.8e-80 301.6 217 66.4
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 8.2e-80 300.8 217 66.8
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 1.4e-79 300.1 217 66.8
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 3.1e-79 298.9 217 65.4
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 9.1e-79 297.4 217 65.9
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 9.1e-79 297.4 217 66.4
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 1.2e-78 297.0 216 66.7
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 1.5e-78 296.6 217 66.4
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 1.5e-78 296.6 217 66.8
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 1.5e-78 296.6 222 67.1
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 2.6e-78 295.8 217 64.1
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 2.6e-78 295.8 217 65.9
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 1.0e-77 293.9 217 64.1
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 1.0e-77 293.9 217 64.1
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 2.9e-77 292.4 218 65.1
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 3.8e-77 292.0 220 65.0
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 5.0e-77 291.6 216 64.8
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 5.0e-77 291.6 217 64.5
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 5.0e-77 291.6 217 64.5
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 6.5e-77 291.2 218 64.2
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 8.5e-77 290.8 217 65.4
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 1.1e-76 290.4 196 68.4
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 3.2e-76 288.9 217 65.9
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 4.2e-76 288.5 201 68.2
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 5.5e-76 288.1 217 65.0
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 9.4e-76 287.3 214 66.4
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 2.7e-75 285.8 214 65.9
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 3.6e-75 285.4 217 64.5
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 3.6e-75 285.4 214 65.9
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 6.1e-75 284.6 217 63.6
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 6.1e-75 284.6 214 65.9
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 1.0e-74 283.9 215 67.9
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 2.3e-74 282.7 211 65.9
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 2.3e-74 282.7 214 65.4
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 3.0e-74 282.3 219 61.2
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 3.0e-74 282.3 217 62.2
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 6.7e-74 281.2 217 62.2
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 2.0e-73 279.6 217 64.1
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 7.4e-73 277.7 214 63.1
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 7.4e-73 277.7 217 62.7
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 1.3e-72 276.9 214 62.6
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 1.3e-72 276.9 217 61.3
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 4.1e-71 271.9 214 62.6
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 5.3e-71 271.6 214 64.0
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 7.0e-71 271.2 214 60.7
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 7.0e-71 271.2 194 67.5
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 7.0e-71 271.2 223 60.1
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.6e-70 270.0 217 60.4
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 1.6e-70 270.0 174 71.8
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 2.0e-70 269.6 219 60.7
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 5.9e-70 268.1 163 73.0
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 1.0e-69 267.3 191 68.6
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 2.9e-69 265.8 202 64.9
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 1.5e-68 263.5 215 60.0
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 5.5e-68 261.5 221 60.6
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 1.6e-67 260.0 158 74.1
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 1.6e-67 260.0 215 60.0
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 2.7e-67 259.2 215 60.9
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 3.6e-67 258.8 214 59.3
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 1.4e-66 256.9 217 60.4
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 1.8e-66 256.5 212 58.0
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 7.5e-65 251.1 215 56.3
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 1.1e-63 247.3 214 56.5
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 1.1e-63 247.3 215 57.7
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 1.4e-63 246.9 217 56.7
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 3.1e-63 245.7 217 57.6
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 4.1e-63 245.4 215 56.3
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 4.1e-63 245.4 217 57.6
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 4.1e-63 245.4 217 57.6
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 1.2e-62 243.8 218 57.8
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 7.7e-62 241.1 218 56.9
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 8.5e-61 237.7 216 56.9
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 4.2e-60 235.3 215 54.4
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 6.8e-58 228.0 217 52.5
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 1.5e-57 226.9 199 58.8
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 1.1e-55 220.7 150 68.0
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 1.0e-53 214.2 152 65.8
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 4.0e-50 202.2 158 61.4
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 1.5e-49 200.3 220 47.3
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 1.7e-48 196.8 156 59.6
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 3.3e-44 182.6 150 56.0
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 1.4e-42 177.2 134 56.7
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 2.9e-40 169.5 144 57.6
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 3.7e-40 169.1 143 51.7
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 3.2e-39 166.0 230 41.7
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 2.8e-35 152.9 139 56.1
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 8.0e-35 151.4 153 45.8
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 3.7e-32 142.5 152 44.7
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 6.6e-29 131.7 82 73.2
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 2.0e-25 120.2 145 37.9
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 8.6e-21 104.8 156 40.4
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 3.3e-20 102.8 52 80.8
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 1.3e-16 90.9 54 81.5
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 5.1e-13 79.0 44 81.8
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 1.1e-07 61.2 71 45.1


User provided reference genes

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