Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 5.6e-44 180.6 97 100.0
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 2.1e-30 135.6 84 89.3
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.8e-29 132.5 74 98.6
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 3.9e-29 131.3 84 85.7
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 1.1e-28 129.8 78 84.6
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 3.3e-28 128.3 83 84.3
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 4.3e-28 127.9 74 94.6
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 5.6e-28 127.5 74 93.2
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 5.6e-28 127.5 74 93.2
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 5.6e-28 127.5 74 93.2
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 5.6e-28 127.5 74 93.2
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 7.4e-28 127.1 73 94.5
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.3e-27 126.3 74 90.5
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.3e-27 126.3 74 89.2
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 1.6e-27 125.9 74 93.2
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 1.6e-27 125.9 74 93.2
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 1.6e-27 125.9 83 72.3
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 1.6e-27 125.9 74 87.8
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 2.1e-27 125.6 73 94.5
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 2.1e-27 125.6 74 77.0
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 2.1e-27 125.6 73 94.5
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 2.8e-27 125.2 74 86.5
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 2.8e-27 125.2 74 77.0
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 2.8e-27 125.2 74 94.6
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 3.7e-27 124.8 73 94.5
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 3.7e-27 124.8 74 91.9
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 4.8e-27 124.4 74 90.5
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 4.8e-27 124.4 74 91.9
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 4.8e-27 124.4 74 89.2
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 4.8e-27 124.4 74 94.6
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 4.8e-27 124.4 74 91.9
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 6.2e-27 124.0 74 89.2
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 6.2e-27 124.0 74 91.9
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 8.1e-27 123.6 74 91.9
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 8.1e-27 123.6 74 91.9
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 1.1e-26 123.2 73 91.8
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 1.1e-26 123.2 72 77.8
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 1.1e-26 123.2 72 77.8
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 1.1e-26 123.2 74 91.9
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 1.1e-26 123.2 73 93.2
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 1.1e-26 123.2 73 93.2
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 1.4e-26 122.9 93 74.2
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 1.4e-26 122.9 74 90.5
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 1.8e-26 122.5 74 70.3
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 1.8e-26 122.5 73 93.2
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 1.8e-26 122.5 73 93.2
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 2.4e-26 122.1 74 83.8
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 2.4e-26 122.1 74 91.9
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 3.1e-26 121.7 78 80.8
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 4.0e-26 121.3 73 90.4
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 5.3e-26 120.9 73 89.0
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 5.3e-26 120.9 74 86.5
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 6.9e-26 120.6 74 85.1
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 6.9e-26 120.6 73 78.1
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 6.9e-26 120.6 74 90.5
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 6.9e-26 120.6 74 90.5
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 6.9e-26 120.6 74 89.2
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 9.0e-26 120.2 76 81.6
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 9.0e-26 120.2 78 80.8
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 1.2e-25 119.8 73 91.8
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 1.2e-25 119.8 73 91.8
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 1.2e-25 119.8 72 88.9
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 1.2e-25 119.8 75 80.0
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 1.5e-25 119.4 73 87.7
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 1.5e-25 119.4 73 87.7
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 2.0e-25 119.0 73 84.9
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 2.0e-25 119.0 73 84.9
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 3.4e-25 118.2 73 84.9
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 3.4e-25 118.2 73 84.9
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 4.5e-25 117.9 76 71.1
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 4.5e-25 117.9 74 90.5
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 5.8e-25 117.5 73 86.3
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 7.6e-25 117.1 73 86.3
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 7.6e-25 117.1 74 89.2
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 7.6e-25 117.1 74 89.2
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 9.9e-25 116.7 76 78.9
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 9.9e-25 116.7 74 87.8
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 9.9e-25 116.7 74 87.8
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 9.9e-25 116.7 74 71.6
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 6.4e-24 114.0 73 86.3
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 8.4e-24 113.6 74 83.8
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 1.9e-23 112.5 73 86.3
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 1.9e-23 112.5 75 81.3
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 2.4e-23 112.1 73 87.7
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 7.1e-23 110.5 74 63.5
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 1.8e-21 105.9 73 82.2
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 2.5e-15 85.5 73 68.5


User provided reference genes

Program Settings