Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048803 Camellia sinensis var. sinensis HOM05D020370 ORTHO05D000016 6.4e-69 263.8 123 100.0
CSS0007402 Camellia sinensis var. sinensis HOM05D020370 ORTHO05D000016 3.9e-50 201.4 111 83.8
CSS0048833 Camellia sinensis var. sinensis HOM05D020370 ORTHO05D000016 1.4e-44 183.0 122 75.4
CSS0003135 Camellia sinensis var. sinensis HOM05D020370 ORTHO05D000016 1.8e-42 176.0 122 72.1
Oeu014137.1 Olea europaea HOM05D000014 ORTHO05D000016 1.3e-34 149.8 124 61.3
PSO713G0020 Papaver somniferum HOM05D000014 ORTHO05D000016 2.8e-32 142.1 118 56.8
PSO063G4150 Papaver somniferum HOM05D000014 ORTHO05D000016 5.3e-31 137.9 118 55.1
PSO478G4345 Papaver somniferum HOM05D000014 ORTHO05D000016 2.6e-30 135.6 118 54.2
Hma1.2p1_0109F.1_g052480 Hydrangea macrophylla HOM05D000014 ORTHO05D000016 4.5e-30 134.8 123 57.7
PSO161G0113 Papaver somniferum HOM05D000014 ORTHO05D000016 2.2e-29 132.5 116 52.6
PSO017G4520 Papaver somniferum HOM05D000014 ORTHO05D000016 3.2e-28 128.6 118 50.8
PSO699G0005 Papaver somniferum HOM05D000014 ORTHO05D000016 2.1e-27 125.9 116 50.9
Actinidia20861 Actinidia chinensis HOM05D000014 ORTHO05D000093 1.6e-19 99.8 160 35.6
Actinidia22454 Actinidia chinensis HOM05D000014 ORTHO05D000016 1.6e-19 99.8 160 35.6
PSO675G1248 Papaver somniferum HOM05D000014 ORTHO05D000016 3.6e-19 98.6 72 55.6
Rhsim01G0103800 Rhododendron simsii HOM05D017964 ORTHO05D000016 3.9e-18 95.1 136 41.2
Migut.H02212 Erythranthe guttata HOM05D001842 ORTHO05D001849 3.3e-17 92.0 127 44.9
CANSAT54G0005 Cannabis sativa HOM05D000014 ORTHO05D000016 2.8e-16 89.0 109 40.4
PSO478G4299 Papaver somniferum HOM05D000014 ORTHO05D000016 4.8e-16 88.2 67 53.7
Hma1.2p1_0491F.1_g164670 Hydrangea macrophylla HOM05D020370 ORTHO05D000016 8.2e-16 87.4 120 40.8
CANSAT54G1893 Cannabis sativa HOM05D000014 ORTHO05D000016 3.1e-15 85.5 109 38.5
PSO782G2400 Papaver somniferum HOM05D000014 ORTHO05D000016 1.5e-14 83.2 72 56.9
CANSAT11G0431 Cannabis sativa HOM05D000014 ORTHO05D000016 7.7e-14 80.9 109 37.6
CANSAT78G0236 Cannabis sativa HOM05D000014 ORTHO05D000016 2.2e-13 79.3 109 37.6
CANSAT25G1869 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-12 77.0 109 36.7
QL10p061586 Quercus lobata HOM05D000014 ORTHO05D000016 1.1e-12 77.0 120 35.8
CANSAT64G0382 Cannabis sativa HOM05D000014 ORTHO05D000093 1.4e-12 76.6 77 39.0
CANSAT64G2125 Cannabis sativa HOM05D000014 ORTHO05D000016 1.4e-12 76.6 118 38.1
QL09p053650 Quercus lobata HOM05D000014 ORTHO05D000093 1.9e-12 76.3 132 35.6
CANSAT25G3341 Cannabis sativa HOM05D000014 ORTHO05D000016 4.2e-12 75.1 94 39.4
CANSAT25G3793 Cannabis sativa HOM05D000014 ORTHO05D000016 4.2e-12 75.1 118 38.1
CANSAT11G2190 Cannabis sativa HOM05D000014 ORTHO05D000016 9.4e-12 73.9 118 37.3
CANSAT25G2927 Cannabis sativa HOM05D000014 ORTHO05D000016 9.4e-12 73.9 118 37.3
CANSAT35G0992 Cannabis sativa HOM05D000014 ORTHO05D000093 9.4e-12 73.9 118 37.3
CANSAT54G2497 Cannabis sativa HOM05D000014 ORTHO05D000016 1.2e-11 73.6 118 34.7
CANSAT56G2640 Cannabis sativa HOM05D000014 ORTHO05D000016 1.2e-11 73.6 95 41.1
CANSAT25G0790 Cannabis sativa HOM05D000014 ORTHO05D000016 3.6e-11 72.0 120 37.5
PSO478G0933 Papaver somniferum HOM05D000014 ORTHO05D000016 4.7e-11 71.6 118 32.2
CSS0006187 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 6.1e-11 71.2 94 38.3
FvH4_7g04071 Fragaria vesca HOM05D000014 ORTHO05D000016 6.1e-11 71.2 116 35.3
EL10Ac6g14688 Beta vulgaris HOM05D000014 ORTHO05D000016 1.4e-10 70.1 102 40.2
CANSAT01G2631 Cannabis sativa HOM05D000014 ORTHO05D000016 1.8e-10 69.7 130 33.8
CANSAT64G1241 Cannabis sativa HOM05D000014 ORTHO05D000016 1.8e-10 69.7 130 33.8
CANSAT80G2515 Cannabis sativa HOM05D000014 ORTHO05D000016 1.8e-10 69.7 130 33.8
CSS0007499 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 2.3e-10 69.3 97 37.1
CSS0040867 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 2.3e-10 69.3 97 37.1
Ah.12g065520 Amaranthus hybridus HOM05D000014 ORTHO05D000093 3.0e-10 68.9 116 36.2
CSS0008202 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 3.0e-10 68.9 97 37.1
Ah.02g117660 Amaranthus hybridus HOM05D000014 ORTHO05D000016 3.9e-10 68.6 131 33.6
PSO478G0157 Papaver somniferum HOM05D000014 ORTHO05D000016 3.9e-10 68.6 77 41.6
CANSAT54G0976 Cannabis sativa HOM05D000014 ORTHO05D000016 5.1e-10 68.2 118 34.7
Ah.03g144860 Amaranthus hybridus HOM05D000014 ORTHO05D000016 6.7e-10 67.8 116 35.3
EL10Ac5g11602 Beta vulgaris HOM05D000014 ORTHO05D000016 8.8e-10 67.4 86 43.0
QL07p002117 Quercus lobata HOM05D000014 ORTHO05D000016 8.8e-10 67.4 65 41.5
MBI11_g02042_MAGBIO Magnolia biondii HOM05D000014 ORTHO05D019279 1.1e-09 67.0 122 33.6
CSS0017697 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 1.5e-09 66.6 97 36.1
PSO478G4079 Papaver somniferum HOM05D000014 ORTHO05D000016 1.5e-09 66.6 89 39.3
PSO832G0712 Papaver somniferum HOM05D000014 ORTHO05D000016 1.5e-09 66.6 104 35.6
TWI81G0756 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 1.5e-09 66.6 110 33.6
TWI81G1095 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 2.0e-09 66.2 110 33.6
PSO782G0100 Papaver somniferum HOM05D000014 ORTHO05D000016 2.6e-09 65.9 41 65.9
TWI39G0697 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 2.6e-09 65.9 110 32.7
Manes.02G221020 Manihot esculenta HOM05D000014 ORTHO05D000016 3.3e-09 65.5 103 39.8
Manes.04G064966 Manihot esculenta HOM05D000014 ORTHO05D000016 4.4e-09 65.1 102 36.3
PGR004G2403 Punica granatum HOM05D000014 ORTHO05D000016 4.4e-09 65.1 117 32.5
PGR083G0640 Punica granatum HOM05D000014 ORTHO05D000016 4.4e-09 65.1 96 37.5
CANSAT11G0489 Cannabis sativa HOM05D000014 ORTHO05D000016 5.7e-09 64.7 105 33.3
Manes.06G029160 Manihot esculenta HOM05D000014 ORTHO05D000016 5.7e-09 64.7 102 35.3
Manes.12G095501 Manihot esculenta HOM05D000014 ORTHO05D000016 5.7e-09 64.7 102 35.3
PSO782G2918 Papaver somniferum HOM05D000014 ORTHO05D000093 5.7e-09 64.7 77 41.6
PGR026G0002 Punica granatum HOM05D000014 ORTHO05D000016 5.7e-09 64.7 118 33.1
PGR031G1161 Punica granatum HOM05D000014 ORTHO05D000016 5.7e-09 64.7 118 33.1
PGR031G1474 Punica granatum HOM05D000014 ORTHO05D000016 5.7e-09 64.7 118 33.1
PGR031G2833 Punica granatum HOM05D000014 ORTHO05D000016 5.7e-09 64.7 118 33.1
PGR031G3309 Punica granatum HOM05D000014 ORTHO05D000016 5.7e-09 64.7 118 33.1
PGR042G2691 Punica granatum HOM05D000014 ORTHO05D000016 5.7e-09 64.7 118 33.1
PGR042G3031 Punica granatum HOM05D000014 ORTHO05D000016 5.7e-09 64.7 118 33.1
PGR102G0138 Punica granatum HOM05D000014 ORTHO05D000016 5.7e-09 64.7 118 33.1
PGR102G1143 Punica granatum HOM05D000014 ORTHO05D000016 5.7e-09 64.7 118 33.1
PGR142G0256 Punica granatum HOM05D000014 ORTHO05D000093 5.7e-09 64.7 118 33.1
PGR142G2478 Punica granatum HOM05D000014 ORTHO05D000016 5.7e-09 64.7 118 33.1
PGR142G4155 Punica granatum HOM05D000014 ORTHO05D000016 5.7e-09 64.7 118 33.1
CSS0041109 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 7.4e-09 64.3 97 35.1
MBI19_g07871_MAGBIO Magnolia biondii HOM05D020370 ORTHO05D019279 7.4e-09 64.3 90 41.1
Manes.08G076205 Manihot esculenta HOM05D000014 ORTHO05D000016 7.4e-09 64.3 99 38.4
PSO339G0601 Papaver somniferum HOM05D000014 ORTHO05D000016 7.4e-09 64.3 64 40.6
CANSAT01G2360 Cannabis sativa HOM05D000014 ORTHO05D000016 9.7e-09 63.9 103 35.9
CANSAT21G1378 Cannabis sativa HOM05D000014 ORTHO05D000016 9.7e-09 63.9 110 34.5
FvH4_3g31201 Fragaria vesca HOM05D000014 ORTHO05D000093 9.7e-09 63.9 108 36.1
PSO541G3434 Papaver somniferum HOM05D000014 ORTHO05D000016 9.7e-09 63.9 77 42.9
PSO541G3525 Papaver somniferum HOM05D000014 ORTHO05D000016 9.7e-09 63.9 92 35.9
PGR142G1132 Punica granatum HOM05D000014 ORTHO05D000016 9.7e-09 63.9 107 35.5
QL08p059259 Quercus lobata HOM05D000014 ORTHO05D000016 9.7e-09 63.9 102 35.3
Manes.08G086511 Manihot esculenta HOM05D000014 ORTHO05D000016 1.3e-08 63.5 98 36.7
PSO541G4034 Papaver somniferum HOM05D000014 ORTHO05D000016 1.3e-08 63.5 124 32.3
PGR013G0002 Punica granatum HOM05D000014 ORTHO05D000016 1.3e-08 63.5 107 35.5
PGR031G1008 Punica granatum HOM05D000014 ORTHO05D000093 1.3e-08 63.5 107 35.5
PGR042G0004 Punica granatum HOM05D000014 ORTHO05D000093 1.3e-08 63.5 107 35.5
PGR044G0742 Punica granatum HOM05D000014 ORTHO05D000093 1.3e-08 63.5 107 35.5
PGR102G0846 Punica granatum HOM05D000014 ORTHO05D000016 1.3e-08 63.5 107 35.5
PGR142G1552 Punica granatum HOM05D000014 ORTHO05D000093 1.3e-08 63.5 107 35.5
CANSAT11G2114 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-08 63.2 105 33.3
CANSAT78G0058 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-08 63.2 105 33.3
CANSAT80G0973 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-08 63.2 105 33.3
Oeu051488.1 Olea europaea HOM05D000014 ORTHO05D000016 1.7e-08 63.2 77 42.9
PSO063G5969 Papaver somniferum HOM05D000014 ORTHO05D000016 1.7e-08 63.2 97 40.2
PSO832G2397 Papaver somniferum HOM05D000014 ORTHO05D000016 1.7e-08 63.2 82 41.5
PGR031G1363 Punica granatum HOM05D000014 ORTHO05D000093 1.7e-08 63.2 119 32.8
PGR142G0407 Punica granatum HOM05D000014 ORTHO05D000016 1.7e-08 63.2 119 32.8
TWI32G0335 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 1.7e-08 63.2 106 33.0
TWI77G0341 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 1.7e-08 63.2 106 33.0
CANSAT21G0085 Cannabis sativa HOM05D000014 ORTHO05D000016 2.2e-08 62.8 105 33.3
Oeu009438.1 Olea europaea HOM05D008689 ORTHO05D009530 2.2e-08 62.8 85 41.2
PSO384G2741 Papaver somniferum HOM05D000014 ORTHO05D000016 2.2e-08 62.8 92 35.9
TWI74G1255 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 2.2e-08 62.8 74 41.9
CANSAT01G2491 Cannabis sativa HOM05D000014 ORTHO05D000016 2.8e-08 62.4 105 33.3
CANSAT01G3201 Cannabis sativa HOM05D000014 ORTHO05D000016 2.8e-08 62.4 62 45.2
Manes.04G051445 Manihot esculenta HOM05D000014 ORTHO05D000016 2.8e-08 62.4 58 50.0
PSO782G1166 Papaver somniferum HOM05D000014 ORTHO05D000016 2.8e-08 62.4 77 40.3
CANSAT01G2924 Cannabis sativa HOM05D000014 ORTHO05D000016 3.7e-08 62.0 96 35.4
CANSAT21G1648 Cannabis sativa HOM05D000014 ORTHO05D000016 3.7e-08 62.0 105 32.4
PSO478G3785 Papaver somniferum HOM05D000014 ORTHO05D000016 4.8e-08 61.6 129 31.8
PGR102G0067 Punica granatum HOM05D000014 ORTHO05D000016 4.8e-08 61.6 80 40.0
CANSAT25G1693 Cannabis sativa HOM05D000014 ORTHO05D000016 8.2e-08 60.8 96 34.4
PSO675G3954 Papaver somniferum HOM05D000014 ORTHO05D000016 8.2e-08 60.8 116 32.8
PSO675G5083 Papaver somniferum HOM05D000014 ORTHO05D000016 8.2e-08 60.8 59 44.1
TWI09G0144 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 8.2e-08 60.8 96 34.4
TWI36G0746 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 8.2e-08 60.8 96 34.4
TWI63G1826 Tripterygium wilfordii HOM05D000014 ORTHO05D000093 8.2e-08 60.8 96 34.4
CSS0011490 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 1.1e-07 60.5 86 36.0
Manes.17G023144 Manihot esculenta HOM05D000014 ORTHO05D000016 1.1e-07 60.5 64 48.4
TWI14G0357 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 1.1e-07 60.5 96 34.4
CANSAT25G1287 Cannabis sativa HOM05D000014 ORTHO05D000016 1.4e-07 60.1 77 44.2
Atru.chr9.524 Acer truncatum HOM05D000450 ORTHO05D000016 1.8e-07 59.7 65 47.7
FvH4_3g26316 Fragaria vesca HOM05D000014 ORTHO05D000016 1.8e-07 59.7 138 29.0
FvH4_6g18062 Fragaria vesca HOM05D000014 ORTHO05D000093 1.8e-07 59.7 138 29.0
MBI14_g40112_MAGBIO Magnolia biondii HOM05D000014 ORTHO05D019279 1.8e-07 59.7 76 39.5
PSO478G3856 Papaver somniferum HOM05D000014 ORTHO05D000016 1.8e-07 59.7 90 37.8
PSO782G5672 Papaver somniferum HOM05D000014 ORTHO05D000016 1.8e-07 59.7 61 42.6
Rhsim01G0069400 Rhododendron simsii HOM05D000014 ORTHO05D000016 1.8e-07 59.7 68 42.6
RcHm_v2.0_Chr5g0080601 Rosa chinensis HOM05D000014 ORTHO05D015124 1.8e-07 59.7 60 41.7
CANSAT11G2138 Cannabis sativa HOM05D000014 ORTHO05D000016 2.4e-07 59.3 101 33.7
AUR62013962 Chenopodium quinoa HOM05D008689 ORTHO05D009530 2.4e-07 59.3 101 33.7
PGR042G0504 Punica granatum HOM05D000014 ORTHO05D000016 2.4e-07 59.3 118 31.4
PSO210G4956 Papaver somniferum HOM05D000014 ORTHO05D000016 3.1e-07 58.9 120 34.2
vmacro01530 Vaccinium macrocarpon HOM05D000080 ORTHO05D000053 3.1e-07 58.9 76 40.8
CSS0026596 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000016 4.1e-07 58.5 97 35.1
Oeu050608.1 Olea europaea HOM05D008689 ORTHO05D009530 4.1e-07 58.5 77 42.9
PSO017G7079 Papaver somniferum HOM05D000014 ORTHO05D000016 4.1e-07 58.5 125 33.6
PSO063G4050 Papaver somniferum HOM05D000014 ORTHO05D000016 4.1e-07 58.5 120 34.2
CANSAT78G0989 Cannabis sativa HOM05D000014 ORTHO05D000016 5.3e-07 58.2 96 33.3
FvH4_4g14302 Fragaria vesca HOM05D000014 ORTHO05D000093 5.3e-07 58.2 113 31.0
PSO063G1908 Papaver somniferum HOM05D000014 ORTHO05D000016 5.3e-07 58.2 101 38.6
PSO210G6029 Papaver somniferum HOM05D000014 ORTHO05D000016 5.3e-07 58.2 101 38.6
CANSAT80G0204 Cannabis sativa HOM05D000014 ORTHO05D000016 9.1e-07 57.4 98 32.7
PSO478G3292 Papaver somniferum HOM05D000014 ORTHO05D000016 9.1e-07 57.4 90 35.6
PSO832G2317 Papaver somniferum HOM05D000014 ORTHO05D000016 9.1e-07 57.4 92 34.8
Oeu049440.1 Olea europaea HOM05D000014 ORTHO05D000016 1.2e-06 57.0 69 46.4
Oeu059205.1 Olea europaea HOM05D000014 ORTHO05D000016 1.2e-06 57.0 77 40.3
Manes.02G026950 Manihot esculenta HOM05D000014 ORTHO05D000016 1.5e-06 56.6 58 44.8
PSO384G0264 Papaver somniferum HOM05D000014 ORTHO05D000016 1.5e-06 56.6 120 30.8
SGA_v2.0_scaffold55G19891 Striga asiatica HOM05D000014 ORTHO05D000093 1.5e-06 56.6 73 38.4
Thecc.03G049100 Theobroma cacao HOM05D000014 ORTHO05D000016 1.5e-06 56.6 114 30.7
Actinidia02546 Actinidia chinensis HOM05D034054 ORTHO05D000016 2.0e-06 56.2 63 36.5
PSO541G5057 Papaver somniferum HOM05D000014 ORTHO05D000016 2.6e-06 55.8 92 34.8
RcHm_v2.0_Chr1g0320831 Rosa chinensis HOM05D000014 ORTHO05D000093 2.6e-06 55.8 61 42.6
Hund15124 Selenicereus undatus HOM05D011980 ORTHO05D013507 2.6e-06 55.8 93 38.7
SGA_v2.0_scaffold375G50241 Striga asiatica HOM05D000014 ORTHO05D000016 2.6e-06 55.8 86 39.5
Ca_26731_v3 Cicer arietinum L. HOM05D000014 ORTHO05D009530 4.5e-06 55.1 98 34.7
FvH4_1g29494 Fragaria vesca HOM05D000014 ORTHO05D000093 4.5e-06 55.1 139 31.7
MD08G1150100 Malus domestica HOM05D000014 ORTHO05D000016 5.9e-06 54.7 97 34.0
MD10G1200800 Malus domestica HOM05D000014 ORTHO05D000016 5.9e-06 54.7 83 34.9
Hund30226 Selenicereus undatus HOM05D011980 ORTHO05D013507 5.9e-06 54.7 93 36.6
PSO170G4220 Papaver somniferum HOM05D000014 ORTHO05D000016 7.7e-06 54.3 99 37.4


User provided reference genes

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