Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 3.9e-148 528.1 261 100.0
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 2.6e-104 382.5 261 73.9
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 4.2e-102 375.2 263 73.0
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 9.3e-94 347.4 250 68.8
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 1.3e-92 343.6 217 77.0
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 4.3e-91 338.6 252 67.1
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 1.6e-90 336.7 230 72.6
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 2.1e-90 336.3 217 73.3
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 4.1e-89 332.0 257 66.5
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 3.4e-88 328.9 261 64.8
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 3.4e-88 328.9 224 71.0
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 5.9e-88 328.2 221 68.3
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 1.7e-87 326.6 253 65.2
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 1.7e-87 326.6 207 75.4
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 2.9e-87 325.9 254 63.8
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 2.9e-87 325.9 256 66.0
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 5.0e-87 325.1 245 65.7
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 2.5e-86 322.8 218 71.1
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 7.2e-86 321.2 219 68.9
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 7.2e-86 321.2 259 62.9
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 1.2e-85 320.5 265 60.4
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 1.2e-85 320.5 223 69.1
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 1.6e-85 320.1 218 70.6
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 7.9e-85 317.8 262 62.2
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 1.3e-84 317.0 228 65.8
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.8e-84 316.6 220 70.5
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 2.3e-84 316.2 223 65.9
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 2.3e-84 316.2 262 62.6
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 3.0e-84 315.8 218 68.8
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 6.7e-84 314.7 227 68.7
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 2.5e-83 312.8 215 66.5
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 3.3e-83 312.4 246 64.2
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 4.3e-83 312.0 242 65.3
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 4.3e-83 312.0 242 65.3
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 5.7e-83 311.6 258 60.1
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 9.7e-83 310.8 225 64.9
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 1.3e-82 310.5 269 58.7
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.3e-82 310.5 258 62.8
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 1.6e-82 310.1 216 66.7
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 3.7e-82 308.9 219 65.8
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 4.8e-82 308.5 218 67.9
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 8.2e-82 307.8 229 65.1
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 8.2e-82 307.8 253 59.3
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 8.2e-82 307.8 254 61.8
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 1.1e-81 307.4 222 64.4
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 1.4e-81 307.0 269 59.5
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 4.1e-81 305.4 195 71.8
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 6.9e-81 304.7 195 71.8
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 9.0e-81 304.3 235 61.7
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 9.0e-81 304.3 214 67.3
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 1.5e-80 303.5 235 62.1
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 2.6e-80 302.8 219 65.8
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 4.5e-80 302.0 195 69.7
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 4.5e-80 302.0 230 62.2
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 5.9e-80 301.6 223 67.7
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 1.0e-79 300.8 246 60.6
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 2.9e-79 299.3 201 70.6
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 3.8e-79 298.9 198 69.2
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 1.1e-78 297.4 258 60.1
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 1.4e-78 297.0 232 62.1
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 2.5e-78 296.2 219 67.6
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 7.2e-78 294.7 243 60.1
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 1.0e-76 290.8 195 69.7
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 1.8e-76 290.0 238 60.9
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 9.7e-75 284.3 269 59.1
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 1.7e-74 283.5 205 68.3
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 1.8e-73 280.0 183 71.0
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 2.1e-69 266.5 213 63.8
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 1.0e-68 264.2 227 60.8
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 1.5e-67 260.4 254 51.6
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 2.6e-67 259.6 244 57.4
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 1.1e-62 244.2 201 59.2
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 3.3e-59 232.6 222 53.2
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 4.4e-59 232.3 203 53.2
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 5.7e-59 231.9 196 55.1
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 6.3e-58 228.4 171 61.4
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 4.1e-57 225.7 221 52.9
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 3.5e-56 222.6 200 60.0
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 2.5e-54 216.5 196 55.1
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 4.2e-54 215.7 198 58.1
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 9.4e-54 214.5 142 71.1
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 6.5e-47 191.8 250 45.6
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 1.2e-45 187.6 135 67.4
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 1.0e-44 184.5 121 76.9
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 5.2e-44 182.2 242 40.9
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 4.1e-41 172.6 95 77.9
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 1.9e-38 163.7 169 53.8
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 7.0e-33 145.2 104 67.3
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 3.0e-31 139.8 80 80.0
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 3.3e-30 136.3 110 62.7
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 3.7e-26 122.9 196 40.3
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 4.9e-26 122.5 89 65.2
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 9.2e-25 118.2 107 54.2
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 1.8e-12 77.4 112 41.1
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 4.0e-12 76.3 93 43.0


User provided reference genes

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